Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
CD248Q9HCU0 AC093775.1-201ENST00000624154 1868 ntBASIC6.26□□□□□ -1.41
CD248Q9HCU0 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
CD248Q9HCU0 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CD248Q9HCU0 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CD248Q9HCU0 RN7SKP292-201ENST00000365522 317 ntBASIC6.26□□□□□ -1.41
CD248Q9HCU0 AC234772.1-201ENST00000377927 937 ntBASIC6.26□□□□□ -1.41
CD248Q9HCU0 SNORA17A-201ENST00000391185 133 ntBASIC6.26□□□□□ -1.41
CD248Q9HCU0 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CD248Q9HCU0 GSTA8P-201ENST00000404253 637 ntBASIC6.26□□□□□ -1.41
CD248Q9HCU0 AC245096.1-201ENST00000413104 546 ntBASIC6.26□□□□□ -1.41
CD248Q9HCU0 HMGB1P49-201ENST00000418882 569 ntBASIC6.26□□□□□ -1.41
CD248Q9HCU0 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC6.26□□□□□ -1.41
CD248Q9HCU0 AL606495.1-201ENST00000422100 813 ntBASIC6.26□□□□□ -1.41
CD248Q9HCU0 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.26□□□□□ -1.41
CD248Q9HCU0 OR5BE1P-201ENST00000425977 939 ntBASIC6.26□□□□□ -1.41
CD248Q9HCU0 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC6.26□□□□□ -1.41
CD248Q9HCU0 C8orf59P1-201ENST00000429930 303 ntBASIC6.26□□□□□ -1.41
CD248Q9HCU0 BX276092.6-201ENST00000430476 250 ntBASIC6.26□□□□□ -1.41
CD248Q9HCU0 PTP4A1P3-201ENST00000433661 420 ntBASIC6.26□□□□□ -1.41
CD248Q9HCU0 HMGB3P10-201ENST00000434734 572 ntBASIC6.26□□□□□ -1.41
CD248Q9HCU0 XKRY2-201ENST00000442362 1093 ntBASIC6.26□□□□□ -1.41
CD248Q9HCU0 TRY2P-201ENST00000448860 689 ntBASIC6.26□□□□□ -1.41
CD248Q9HCU0 VPS25P1-201ENST00000455691 508 ntBASIC6.26□□□□□ -1.41
CD248Q9HCU0 BX276092.8-201ENST00000455722 250 ntBASIC6.26□□□□□ -1.41
CD248Q9HCU0 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC6.26□□□□□ -1.41
CD248Q9HCU0 AC108734.3-201ENST00000481241 1165 ntBASIC6.26□□□□□ -1.41
CD248Q9HCU0 AL035690.1-201ENST00000490892 383 ntBASIC6.26□□□□□ -1.41
CD248Q9HCU0 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC6.26□□□□□ -1.41
CD248Q9HCU0 AC008549.1-201ENST00000512900 643 ntBASIC6.26□□□□□ -1.41
CD248Q9HCU0 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC6.26□□□□□ -1.41
CD248Q9HCU0 AC021146.10-201ENST00000515628 706 ntBASIC6.26□□□□□ -1.41
CD248Q9HCU0 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC6.26□□□□□ -1.41
CD248Q9HCU0 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CD248Q9HCU0 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC6.26□□□□□ -1.41
CD248Q9HCU0 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC6.26□□□□□ -1.41
CD248Q9HCU0 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.26□□□□□ -1.41
CD248Q9HCU0 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.26□□□□□ -1.41
CD248Q9HCU0 EIF1P5-201ENST00000585002 234 ntBASIC6.26□□□□□ -1.41
CD248Q9HCU0 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.26□□□□□ -1.41
CD248Q9HCU0 AC011445.2-201ENST00000599274 173 ntBASIC6.26□□□□□ -1.41
CD248Q9HCU0 AC093765.1-201ENST00000603758 881 ntBASIC6.26□□□□□ -1.41
CD248Q9HCU0 AP000894.4-201ENST00000610185 483 ntBASIC6.26□□□□□ -1.41
CD248Q9HCU0 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
CD248Q9HCU0 AL133243.1-201ENST00000614487 366 ntBASIC6.26□□□□□ -1.41
CD248Q9HCU0 AL645927.2-201ENST00000618350 349 ntBASIC6.26□□□□□ -1.41
CD248Q9HCU0 AL136228.1-201ENST00000622221 319 ntBASIC6.26□□□□□ -1.41
CD248Q9HCU0 AP003499.2-201ENST00000624100 483 ntBASIC6.26□□□□□ -1.41
CD248Q9HCU0 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC6.26□□□□□ -1.41
CD248Q9HCU0 SNORA17.5-201ENST00000630429 132 ntBASIC6.26□□□□□ -1.41
CD248Q9HCU0 AL392088.2-201ENST00000637607 285 ntBASIC6.26□□□□□ -1.41
CD248Q9HCU0 OR5BE1P-202ENST00000641168 1176 ntBASIC6.26□□□□□ -1.41
CD248Q9HCU0 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
CD248Q9HCU0 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
CD248Q9HCU0 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
CD248Q9HCU0 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC6.26□□□□□ -1.41
CD248Q9HCU0 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CD248Q9HCU0 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CD248Q9HCU0 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CD248Q9HCU0 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
CD248Q9HCU0 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC6.26□□□□□ -1.41
CD248Q9HCU0 MAPK10-328ENST00000641553 4009 ntBASIC6.26□□□□□ -1.41
CD248Q9HCU0 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CD248Q9HCU0 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CD248Q9HCU0 SUCLA2P2-201ENST00000417269 1309 ntBASIC6.25□□□□□ -1.41
CD248Q9HCU0 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC6.25□□□□□ -1.41
CD248Q9HCU0 AC104446.1-201ENST00000613728 1321 ntBASIC6.25□□□□□ -1.41
CD248Q9HCU0 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.25□□□□□ -1.41
CD248Q9HCU0 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.25□□□□□ -1.41
CD248Q9HCU0 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CD248Q9HCU0 AC004076.2-201ENST00000620532 3323 ntBASIC6.25□□□□□ -1.41
CD248Q9HCU0 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.25□□□□□ -1.41
CD248Q9HCU0 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.25□□□□□ -1.41
CD248Q9HCU0 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CD248Q9HCU0 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
CD248Q9HCU0 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
CD248Q9HCU0 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
CD248Q9HCU0 RNU6-1331P-201ENST00000363658 106 ntBASIC6.25□□□□□ -1.41
CD248Q9HCU0 RNA5SP510-201ENST00000364697 99 ntBASIC6.25□□□□□ -1.41
CD248Q9HCU0 SNORA5.1-201ENST00000384275 131 ntBASIC6.25□□□□□ -1.41
CD248Q9HCU0 RNA5SP284-201ENST00000384547 118 ntBASIC6.25□□□□□ -1.41
CD248Q9HCU0 RNU6-1320P-201ENST00000390838 107 ntBASIC6.25□□□□□ -1.41
CD248Q9HCU0 RNU6-1269P-201ENST00000391139 107 ntBASIC6.25□□□□□ -1.41
CD248Q9HCU0 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC6.25□□□□□ -1.41
CD248Q9HCU0 AC002524.1-201ENST00000411687 547 ntBASIC6.25□□□□□ -1.41
CD248Q9HCU0 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.25□□□□□ -1.41
CD248Q9HCU0 EEF1B2P5-201ENST00000444820 548 ntBASIC6.25□□□□□ -1.41
CD248Q9HCU0 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC6.25□□□□□ -1.41
CD248Q9HCU0 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC6.25□□□□□ -1.41
CD248Q9HCU0 NXT1P1-201ENST00000458481 316 ntBASIC6.25□□□□□ -1.41
CD248Q9HCU0 RNU6-599P-201ENST00000459383 107 ntBASIC6.25□□□□□ -1.41
CD248Q9HCU0 RNU6-1193P-201ENST00000459461 107 ntBASIC6.25□□□□□ -1.41
CD248Q9HCU0 AC011476.1-201ENST00000466725 307 ntBASIC6.25□□□□□ -1.41
CD248Q9HCU0 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.25□□□□□ -1.41
CD248Q9HCU0 RPS3AP43-201ENST00000479743 781 ntBASIC6.25□□□□□ -1.41
CD248Q9HCU0 OR9N1P-201ENST00000491296 333 ntBASIC6.25□□□□□ -1.41
CD248Q9HCU0 AC090543.1-201ENST00000492168 485 ntBASIC6.25□□□□□ -1.41
CD248Q9HCU0 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.25□□□□□ -1.41
CD248Q9HCU0 AC104685.1-201ENST00000502445 371 ntBASIC6.25□□□□□ -1.41
CD248Q9HCU0 ST13P12-201ENST00000508958 1094 ntBASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms