Protein–RNA interactions for Protein: Q99674

CGREF1, Cell growth regulator with EF hand domain protein 1, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1Q99674 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
CGREF1Q99674 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CGREF1Q99674 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
CGREF1Q99674 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC4.79□□□□□ -1.64
CGREF1Q99674 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CGREF1Q99674 RN7SKP113-201ENST00000363891 295 ntBASIC4.79□□□□□ -1.64
CGREF1Q99674 RN7SKP124-201ENST00000364730 341 ntBASIC4.79□□□□□ -1.64
CGREF1Q99674 RNA5SP284-201ENST00000384547 118 ntBASIC4.79□□□□□ -1.64
CGREF1Q99674 MIR1182-201ENST00000408363 97 ntBASIC4.79□□□□□ -1.64
CGREF1Q99674 AL390774.1-201ENST00000411924 246 ntBASIC4.79□□□□□ -1.64
CGREF1Q99674 AL133325.1-201ENST00000421090 382 ntBASIC4.79□□□□□ -1.64
CGREF1Q99674 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.79□□□□□ -1.64
CGREF1Q99674 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.79□□□□□ -1.64
CGREF1Q99674 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CGREF1Q99674 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CGREF1Q99674 AC019084.1-201ENST00000457337 432 ntBASIC4.79□□□□□ -1.64
CGREF1Q99674 AC007998.1-201ENST00000474156 672 ntBASIC4.79□□□□□ -1.64
CGREF1Q99674 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.79□□□□□ -1.64
CGREF1Q99674 STMN1P2-201ENST00000508435 439 ntBASIC4.79□□□□□ -1.64
CGREF1Q99674 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CGREF1Q99674 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.79□□□□□ -1.64
CGREF1Q99674 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.79□□□□□ -1.64
CGREF1Q99674 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CGREF1Q99674 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CGREF1Q99674 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.79□□□□□ -1.64
CGREF1Q99674 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CGREF1Q99674 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC4.79□□□□□ -1.64
CGREF1Q99674 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC4.79□□□□□ -1.64
CGREF1Q99674 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.79□□□□□ -1.64
CGREF1Q99674 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.79□□□□□ -1.64
CGREF1Q99674 SNX18P1Y-201ENST00000616231 511 ntBASIC4.79□□□□□ -1.64
CGREF1Q99674 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.79□□□□□ -1.64
CGREF1Q99674 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.79□□□□□ -1.64
CGREF1Q99674 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.79□□□□□ -1.64
CGREF1Q99674 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CGREF1Q99674 SCARNA15-201ENST00000607520 4325 ntBASIC4.79□□□□□ -1.64
CGREF1Q99674 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.79□□□□□ -1.64
CGREF1Q99674 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.79□□□□□ -1.64
CGREF1Q99674 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.79□□□□□ -1.64
CGREF1Q99674 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.79□□□□□ -1.64
CGREF1Q99674 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.79□□□□□ -1.64
CGREF1Q99674 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CGREF1Q99674 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CGREF1Q99674 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CGREF1Q99674 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.79□□□□□ -1.64
CGREF1Q99674 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CGREF1Q99674 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CGREF1Q99674 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
CGREF1Q99674 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.78□□□□□ -1.64
CGREF1Q99674 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.78□□□□□ -1.64
CGREF1Q99674 AC068254.2-201ENST00000623938 3577 ntBASIC4.78□□□□□ -1.64
CGREF1Q99674 AC235565.1-201ENST00000456962 1325 ntBASIC4.78□□□□□ -1.64
CGREF1Q99674 ALB-209ENST00000503124 1741 ntTSL 5 BASIC4.78□□□□□ -1.64
CGREF1Q99674 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CGREF1Q99674 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.78□□□□□ -1.64
CGREF1Q99674 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.78□□□□□ -1.64
CGREF1Q99674 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CGREF1Q99674 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.78□□□□□ -1.64
CGREF1Q99674 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC4.78□□□□□ -1.64
CGREF1Q99674 AL391422.1-201ENST00000402155 436 ntBASIC4.78□□□□□ -1.64
CGREF1Q99674 AC092570.3-201ENST00000420113 693 ntBASIC4.78□□□□□ -1.64
CGREF1Q99674 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC4.78□□□□□ -1.64
CGREF1Q99674 FAM96AP1-201ENST00000430879 482 ntBASIC4.78□□□□□ -1.64
CGREF1Q99674 RPS26P4-201ENST00000431743 355 ntBASIC4.78□□□□□ -1.64
CGREF1Q99674 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC4.78□□□□□ -1.64
CGREF1Q99674 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.78□□□□□ -1.64
CGREF1Q99674 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC4.78□□□□□ -1.64
CGREF1Q99674 AL450023.3-201ENST00000440592 271 ntBASIC4.78□□□□□ -1.64
CGREF1Q99674 ARL4AP3-201ENST00000441452 574 ntBASIC4.78□□□□□ -1.64
CGREF1Q99674 HMGN1P2-201ENST00000445197 310 ntBASIC4.78□□□□□ -1.64
CGREF1Q99674 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.78□□□□□ -1.64
CGREF1Q99674 AL691482.1-201ENST00000453255 87 ntBASIC4.78□□□□□ -1.64
CGREF1Q99674 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.78□□□□□ -1.64
CGREF1Q99674 Z92846.1-201ENST00000456203 268 ntBASIC4.78□□□□□ -1.64
CGREF1Q99674 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.78□□□□□ -1.64
CGREF1Q99674 AC090686.1-201ENST00000481577 749 ntBASIC4.78□□□□□ -1.64
CGREF1Q99674 RPS4XP20-201ENST00000505751 772 ntBASIC4.78□□□□□ -1.64
CGREF1Q99674 GTF2F2P1-201ENST00000511083 675 ntBASIC4.78□□□□□ -1.64
CGREF1Q99674 AC022826.1-201ENST00000519383 805 ntBASIC4.78□□□□□ -1.64
CGREF1Q99674 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC4.78□□□□□ -1.64
CGREF1Q99674 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.78□□□□□ -1.64
CGREF1Q99674 AC112191.2-201ENST00000522428 333 ntBASIC4.78□□□□□ -1.64
CGREF1Q99674 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC4.78□□□□□ -1.64
CGREF1Q99674 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.78□□□□□ -1.64
CGREF1Q99674 AC135626.1-201ENST00000556983 435 ntBASIC4.78□□□□□ -1.64
CGREF1Q99674 HMGB3P26-201ENST00000560051 582 ntBASIC4.78□□□□□ -1.64
CGREF1Q99674 CYCSP40-201ENST00000575927 294 ntBASIC4.78□□□□□ -1.64
CGREF1Q99674 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.78□□□□□ -1.64
CGREF1Q99674 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC4.78□□□□□ -1.64
CGREF1Q99674 MRO-208ENST00000588444 866 ntTSL 3 BASIC4.78□□□□□ -1.64
CGREF1Q99674 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.78□□□□□ -1.64
CGREF1Q99674 SUGT1P3-202ENST00000604259 383 ntBASIC4.78□□□□□ -1.64
CGREF1Q99674 AL499605.1-201ENST00000604628 403 ntBASIC4.78□□□□□ -1.64
CGREF1Q99674 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC4.78□□□□□ -1.64
CGREF1Q99674 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CGREF1Q99674 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.78□□□□□ -1.64
CGREF1Q99674 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.78□□□□□ -1.64
CGREF1Q99674 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC4.78□□□□□ -1.64
CGREF1Q99674 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CGREF1Q99674 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms