Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 MRPL35P2-201ENST00000448009 511 ntBASIC4.79□□□□□ -1.64
COL21A1Q96P44 AURKAPS1-201ENST00000451805 1212 ntBASIC4.79□□□□□ -1.64
COL21A1Q96P44 AL389915.2-201ENST00000454576 441 ntBASIC4.79□□□□□ -1.64
COL21A1Q96P44 AC110749.1-201ENST00000462007 357 ntBASIC4.79□□□□□ -1.64
COL21A1Q96P44 AC009127.1-201ENST00000467090 155 ntBASIC4.79□□□□□ -1.64
COL21A1Q96P44 RN7SL222P-201ENST00000476452 299 ntBASIC4.79□□□□□ -1.64
COL21A1Q96P44 RN7SL177P-201ENST00000476596 299 ntBASIC4.79□□□□□ -1.64
COL21A1Q96P44 AC020779.1-201ENST00000478757 796 ntBASIC4.79□□□□□ -1.64
COL21A1Q96P44 RPS4XP14-201ENST00000493072 781 ntBASIC4.79□□□□□ -1.64
COL21A1Q96P44 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.79□□□□□ -1.64
COL21A1Q96P44 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.79□□□□□ -1.64
COL21A1Q96P44 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.79□□□□□ -1.64
COL21A1Q96P44 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.79□□□□□ -1.64
COL21A1Q96P44 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.79□□□□□ -1.64
COL21A1Q96P44 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.79□□□□□ -1.64
COL21A1Q96P44 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
COL21A1Q96P44 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.79□□□□□ -1.64
COL21A1Q96P44 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.79□□□□□ -1.64
COL21A1Q96P44 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.79□□□□□ -1.64
COL21A1Q96P44 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.79□□□□□ -1.64
COL21A1Q96P44 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
COL21A1Q96P44 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.79□□□□□ -1.64
COL21A1Q96P44 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.79□□□□□ -1.64
COL21A1Q96P44 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.79□□□□□ -1.64
COL21A1Q96P44 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.79□□□□□ -1.64
COL21A1Q96P44 AL713998.2-201ENST00000604538 1198 ntBASIC4.79□□□□□ -1.64
COL21A1Q96P44 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
COL21A1Q96P44 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.79□□□□□ -1.64
COL21A1Q96P44 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.79□□□□□ -1.64
COL21A1Q96P44 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.79□□□□□ -1.64
COL21A1Q96P44 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
COL21A1Q96P44 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
COL21A1Q96P44 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.79□□□□□ -1.64
COL21A1Q96P44 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
COL21A1Q96P44 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
COL21A1Q96P44 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
COL21A1Q96P44 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
COL21A1Q96P44 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
COL21A1Q96P44 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
COL21A1Q96P44 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
COL21A1Q96P44 CASC19-255ENST00000641733 1385 ntBASIC4.78□□□□□ -1.64
COL21A1Q96P44 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.78□□□□□ -1.64
COL21A1Q96P44 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
COL21A1Q96P44 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
COL21A1Q96P44 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
COL21A1Q96P44 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC4.78□□□□□ -1.64
COL21A1Q96P44 AC007068.1-201ENST00000396690 844 ntBASIC4.78□□□□□ -1.64
COL21A1Q96P44 MIR1182-201ENST00000408363 97 ntBASIC4.78□□□□□ -1.64
COL21A1Q96P44 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.78□□□□□ -1.64
COL21A1Q96P44 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.78□□□□□ -1.64
COL21A1Q96P44 EI24P4-201ENST00000423683 1078 ntBASIC4.78□□□□□ -1.64
COL21A1Q96P44 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.78□□□□□ -1.64
COL21A1Q96P44 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.78□□□□□ -1.64
COL21A1Q96P44 AC012519.1-201ENST00000424588 610 ntBASIC4.78□□□□□ -1.64
COL21A1Q96P44 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.78□□□□□ -1.64
COL21A1Q96P44 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.78□□□□□ -1.64
COL21A1Q96P44 AC104849.1-201ENST00000462623 405 ntBASIC4.78□□□□□ -1.64
COL21A1Q96P44 RPS18P6-201ENST00000476880 458 ntBASIC4.78□□□□□ -1.64
COL21A1Q96P44 RN7SL346P-201ENST00000491561 294 ntBASIC4.78□□□□□ -1.64
COL21A1Q96P44 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.78□□□□□ -1.64
COL21A1Q96P44 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.78□□□□□ -1.64
COL21A1Q96P44 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.78□□□□□ -1.64
COL21A1Q96P44 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.78□□□□□ -1.64
COL21A1Q96P44 RNA5SP92-201ENST00000516437 110 ntBASIC4.78□□□□□ -1.64
COL21A1Q96P44 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.78□□□□□ -1.64
COL21A1Q96P44 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
COL21A1Q96P44 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.78□□□□□ -1.64
COL21A1Q96P44 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.78□□□□□ -1.64
COL21A1Q96P44 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.78□□□□□ -1.64
COL21A1Q96P44 AP005131.7-201ENST00000610087 611 ntBASIC4.78□□□□□ -1.64
COL21A1Q96P44 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.78□□□□□ -1.64
COL21A1Q96P44 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
COL21A1Q96P44 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.78□□□□□ -1.64
COL21A1Q96P44 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.78□□□□□ -1.64
COL21A1Q96P44 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.78□□□□□ -1.64
COL21A1Q96P44 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
COL21A1Q96P44 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
COL21A1Q96P44 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.78□□□□□ -1.64
COL21A1Q96P44 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
COL21A1Q96P44 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
COL21A1Q96P44 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
COL21A1Q96P44 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
COL21A1Q96P44 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
COL21A1Q96P44 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
COL21A1Q96P44 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
COL21A1Q96P44 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.77□□□□□ -1.65
COL21A1Q96P44 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.77□□□□□ -1.65
COL21A1Q96P44 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
COL21A1Q96P44 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
COL21A1Q96P44 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
COL21A1Q96P44 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.77□□□□□ -1.65
COL21A1Q96P44 OR13Z1P-201ENST00000416141 834 ntBASIC4.77□□□□□ -1.65
COL21A1Q96P44 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.77□□□□□ -1.65
COL21A1Q96P44 AC013429.2-201ENST00000418798 781 ntBASIC4.77□□□□□ -1.65
COL21A1Q96P44 NPM1P22-201ENST00000427761 952 ntBASIC4.77□□□□□ -1.65
COL21A1Q96P44 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC4.77□□□□□ -1.65
COL21A1Q96P44 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC4.77□□□□□ -1.65
COL21A1Q96P44 VN1R96P-201ENST00000446052 858 ntBASIC4.77□□□□□ -1.65
COL21A1Q96P44 AC005412.2-201ENST00000492004 341 ntBASIC4.77□□□□□ -1.65
COL21A1Q96P44 SUMO2P4-201ENST00000504193 276 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms