Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.18□□□□□ -1.58
C9orf72Q96LT7 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
C9orf72Q96LT7 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
C9orf72Q96LT7 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
C9orf72Q96LT7 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
C9orf72Q96LT7 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.17□□□□□ -1.58
C9orf72Q96LT7 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.17□□□□□ -1.58
C9orf72Q96LT7 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.17□□□□□ -1.58
C9orf72Q96LT7 AC026523.2-201ENST00000625039 7739 ntBASIC5.17□□□□□ -1.58
C9orf72Q96LT7 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
C9orf72Q96LT7 AL672167.1-205ENST00000641112 3080 ntBASIC5.17□□□□□ -1.58
C9orf72Q96LT7 RNU6-673P-201ENST00000365084 104 ntBASIC5.17□□□□□ -1.58
C9orf72Q96LT7 DUTP5-201ENST00000406790 469 ntBASIC5.17□□□□□ -1.58
C9orf72Q96LT7 AC013268.2-201ENST00000420753 337 ntBASIC5.17□□□□□ -1.58
C9orf72Q96LT7 RPL36AP10-201ENST00000421785 322 ntBASIC5.17□□□□□ -1.58
C9orf72Q96LT7 NPM1P22-201ENST00000427761 952 ntBASIC5.17□□□□□ -1.58
C9orf72Q96LT7 RPL34P6-201ENST00000432390 345 ntBASIC5.17□□□□□ -1.58
C9orf72Q96LT7 AC093270.2-201ENST00000486157 792 ntBASIC5.17□□□□□ -1.58
C9orf72Q96LT7 AC004453.1-201ENST00000487895 408 ntBASIC5.17□□□□□ -1.58
C9orf72Q96LT7 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.17□□□□□ -1.58
C9orf72Q96LT7 RPL23AP53-201ENST00000521854 457 ntBASIC5.17□□□□□ -1.58
C9orf72Q96LT7 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.17□□□□□ -1.58
C9orf72Q96LT7 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
C9orf72Q96LT7 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC5.17□□□□□ -1.58
C9orf72Q96LT7 AL390334.1-201ENST00000556395 450 ntBASIC5.17□□□□□ -1.58
C9orf72Q96LT7 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.17□□□□□ -1.58
C9orf72Q96LT7 AC008536.1-201ENST00000602872 669 ntBASIC5.17□□□□□ -1.58
C9orf72Q96LT7 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.17□□□□□ -1.58
C9orf72Q96LT7 AL445222.1-201ENST00000607259 628 ntBASIC5.17□□□□□ -1.58
C9orf72Q96LT7 AC090527.3-201ENST00000619041 548 ntBASIC5.17□□□□□ -1.58
C9orf72Q96LT7 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.17□□□□□ -1.58
C9orf72Q96LT7 AC015871.5-202ENST00000623252 701 ntBASIC5.17□□□□□ -1.58
C9orf72Q96LT7 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.17□□□□□ -1.58
C9orf72Q96LT7 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
C9orf72Q96LT7 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
C9orf72Q96LT7 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
C9orf72Q96LT7 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.17□□□□□ -1.58
C9orf72Q96LT7 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
C9orf72Q96LT7 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
C9orf72Q96LT7 SAMMSON-213ENST00000641336 1521 ntBASIC5.17□□□□□ -1.58
C9orf72Q96LT7 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
C9orf72Q96LT7 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
C9orf72Q96LT7 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
C9orf72Q96LT7 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.16□□□□□ -1.58
C9orf72Q96LT7 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
C9orf72Q96LT7 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
C9orf72Q96LT7 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.16□□□□□ -1.58
C9orf72Q96LT7 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
C9orf72Q96LT7 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
C9orf72Q96LT7 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.16□□□□□ -1.58
C9orf72Q96LT7 UBBP2-201ENST00000376781 231 ntBASIC5.16□□□□□ -1.58
C9orf72Q96LT7 RNA5SP296-201ENST00000410523 111 ntBASIC5.16□□□□□ -1.58
C9orf72Q96LT7 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.16□□□□□ -1.58
C9orf72Q96LT7 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.16□□□□□ -1.58
C9orf72Q96LT7 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
C9orf72Q96LT7 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.16□□□□□ -1.58
C9orf72Q96LT7 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.16□□□□□ -1.58
C9orf72Q96LT7 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.16□□□□□ -1.58
C9orf72Q96LT7 AC004980.3-201ENST00000447046 365 ntBASIC5.16□□□□□ -1.58
C9orf72Q96LT7 RNA5SP103-201ENST00000459503 118 ntBASIC5.16□□□□□ -1.58
C9orf72Q96LT7 RN7SL808P-201ENST00000496066 299 ntBASIC5.16□□□□□ -1.58
C9orf72Q96LT7 NDUFA5P12-201ENST00000503796 343 ntBASIC5.16□□□□□ -1.58
C9orf72Q96LT7 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.16□□□□□ -1.58
C9orf72Q96LT7 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.16□□□□□ -1.58
C9orf72Q96LT7 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.16□□□□□ -1.58
C9orf72Q96LT7 RNA5SP249-201ENST00000516127 99 ntBASIC5.16□□□□□ -1.58
C9orf72Q96LT7 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.16□□□□□ -1.58
C9orf72Q96LT7 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.16□□□□□ -1.58
C9orf72Q96LT7 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.16□□□□□ -1.58
C9orf72Q96LT7 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.16□□□□□ -1.58
C9orf72Q96LT7 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.16□□□□□ -1.58
C9orf72Q96LT7 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
C9orf72Q96LT7 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
C9orf72Q96LT7 OR11J2P-201ENST00000555298 907 ntBASIC5.16□□□□□ -1.58
C9orf72Q96LT7 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
C9orf72Q96LT7 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
C9orf72Q96LT7 AC116553.2-201ENST00000564203 463 ntBASIC5.16□□□□□ -1.58
C9orf72Q96LT7 MIR3691-201ENST00000578066 90 ntBASIC5.16□□□□□ -1.58
C9orf72Q96LT7 OR8G7P-201ENST00000616658 848 ntBASIC5.16□□□□□ -1.58
C9orf72Q96LT7 AC020763.5-201ENST00000623298 430 ntBASIC5.16□□□□□ -1.58
C9orf72Q96LT7 AC135068.12-201ENST00000637370 931 ntBASIC5.16□□□□□ -1.58
C9orf72Q96LT7 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.16□□□□□ -1.58
C9orf72Q96LT7 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
C9orf72Q96LT7 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
C9orf72Q96LT7 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
C9orf72Q96LT7 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.16□□□□□ -1.58
C9orf72Q96LT7 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
C9orf72Q96LT7 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
C9orf72Q96LT7 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.58
C9orf72Q96LT7 AP001642.1-201ENST00000624727 2117 ntBASIC5.15□□□□□ -1.58
C9orf72Q96LT7 SALL4P2-201ENST00000423288 2910 ntBASIC5.15□□□□□ -1.58
C9orf72Q96LT7 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.15□□□□□ -1.58
C9orf72Q96LT7 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
C9orf72Q96LT7 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
C9orf72Q96LT7 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
C9orf72Q96LT7 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.15□□□□□ -1.58
C9orf72Q96LT7 AC126323.6-202ENST00000568092 3511 ntBASIC5.15□□□□□ -1.58
C9orf72Q96LT7 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
C9orf72Q96LT7 AC068446.1-201ENST00000556425 1549 ntBASIC5.15□□□□□ -1.58
C9orf72Q96LT7 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms