Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 RN7SL189P-201ENST00000468631 289 ntBASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 MORF4L2P1-201ENST00000503761 858 ntBASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 SEPT10P1-201ENST00000517342 1162 ntBASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 AC060780.2-201ENST00000589047 198 ntBASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 AP000843.1-201ENST00000624880 701 ntBASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 RNF123-214ENST00000629802 207 ntTSL 5 BASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 AL442639.1-201ENST00000625030 1899 ntBASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC3.31□□□□□ -1.88
ALMS1Q8TCU4 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC3.31□□□□□ -1.88
ALMS1Q8TCU4 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC3.31□□□□□ -1.88
ALMS1Q8TCU4 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC3.31□□□□□ -1.88
ALMS1Q8TCU4 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
ALMS1Q8TCU4 SNORD46.1-201ENST00000364139 104 ntBASIC3.31□□□□□ -1.88
ALMS1Q8TCU4 AL161909.1-201ENST00000397390 712 ntBASIC3.31□□□□□ -1.88
ALMS1Q8TCU4 RCC2P2-201ENST00000422174 918 ntBASIC3.31□□□□□ -1.88
ALMS1Q8TCU4 AP001324.1-201ENST00000428553 399 ntBASIC3.31□□□□□ -1.88
ALMS1Q8TCU4 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.31□□□□□ -1.88
ALMS1Q8TCU4 AC108463.1-201ENST00000450258 347 ntBASIC3.31□□□□□ -1.88
ALMS1Q8TCU4 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC3.31□□□□□ -1.88
ALMS1Q8TCU4 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC3.31□□□□□ -1.88
ALMS1Q8TCU4 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.31□□□□□ -1.88
ALMS1Q8TCU4 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
ALMS1Q8TCU4 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
ALMS1Q8TCU4 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
ALMS1Q8TCU4 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
ALMS1Q8TCU4 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC3.31□□□□□ -1.88
ALMS1Q8TCU4 SALL4P2-201ENST00000423288 2910 ntBASIC3.31□□□□□ -1.88
ALMS1Q8TCU4 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
ALMS1Q8TCU4 RN7SL542P-201ENST00000467147 294 ntBASIC3.31□□□□□ -1.88
ALMS1Q8TCU4 DEFB109A-201ENST00000482450 265 ntBASIC3.31□□□□□ -1.88
ALMS1Q8TCU4 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.31□□□□□ -1.88
ALMS1Q8TCU4 RN7SL703P-201ENST00000578485 302 ntBASIC3.31□□□□□ -1.88
ALMS1Q8TCU4 MIR3158-1-201ENST00000583596 81 ntBASIC3.31□□□□□ -1.88
ALMS1Q8TCU4 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.31□□□□□ -1.88
ALMS1Q8TCU4 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC3.31□□□□□ -1.88
ALMS1Q8TCU4 AC097634.1-201ENST00000604491 2467 ntBASIC3.31□□□□□ -1.88
ALMS1Q8TCU4 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
ALMS1Q8TCU4 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
ALMS1Q8TCU4 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC3.31□□□□□ -1.88
ALMS1Q8TCU4 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
ALMS1Q8TCU4 AL731566.1-201ENST00000620490 1937 ntBASIC3.31□□□□□ -1.88
ALMS1Q8TCU4 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC3.31□□□□□ -1.88
ALMS1Q8TCU4 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
ALMS1Q8TCU4 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
ALMS1Q8TCU4 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
ALMS1Q8TCU4 VCAN-208ENST00000512590 5923 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
ALMS1Q8TCU4 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC3.31□□□□□ -1.88
ALMS1Q8TCU4 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
ALMS1Q8TCU4 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC3.31□□□□□ -1.88
ALMS1Q8TCU4 ATP5F1P2-201ENST00000398143 760 ntBASIC3.31□□□□□ -1.88
ALMS1Q8TCU4 U3.32-201ENST00000408116 212 ntBASIC3.31□□□□□ -1.88
ALMS1Q8TCU4 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.31□□□□□ -1.88
ALMS1Q8TCU4 SSR3-206ENST00000476217 807 ntTSL 3 BASIC3.31□□□□□ -1.88
ALMS1Q8TCU4 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC3.31□□□□□ -1.88
ALMS1Q8TCU4 HMGN1P9-201ENST00000515212 298 ntBASIC3.31□□□□□ -1.88
ALMS1Q8TCU4 AC025884.1-201ENST00000556034 378 ntBASIC3.31□□□□□ -1.88
ALMS1Q8TCU4 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
ALMS1Q8TCU4 RNA5SP439-201ENST00000617595 124 ntBASIC3.31□□□□□ -1.88
ALMS1Q8TCU4 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
ALMS1Q8TCU4 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
ALMS1Q8TCU4 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
ALMS1Q8TCU4 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC3.31□□□□□ -1.88
ALMS1Q8TCU4 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
ALMS1Q8TCU4 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
ALMS1Q8TCU4 AL357515.1-201ENST00000402967 542 ntBASIC3.3□□□□□ -1.88
ALMS1Q8TCU4 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
ALMS1Q8TCU4 IGKV1OR9-1-201ENST00000424370 284 ntBASIC3.3□□□□□ -1.88
ALMS1Q8TCU4 SCAND3P1-201ENST00000439854 1060 ntBASIC3.3□□□□□ -1.88
ALMS1Q8TCU4 RPS5P7-201ENST00000456664 608 ntBASIC3.3□□□□□ -1.88
ALMS1Q8TCU4 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.3□□□□□ -1.88
ALMS1Q8TCU4 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC3.3□□□□□ -1.88
ALMS1Q8TCU4 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC3.3□□□□□ -1.88
ALMS1Q8TCU4 AL049839.1-201ENST00000556151 657 ntBASIC3.3□□□□□ -1.88
ALMS1Q8TCU4 MIR4660-201ENST00000583549 74 ntBASIC3.3□□□□□ -1.88
ALMS1Q8TCU4 UBA2-208ENST00000592791 910 ntTSL 2 BASIC3.3□□□□□ -1.88
ALMS1Q8TCU4 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC3.3□□□□□ -1.88
ALMS1Q8TCU4 AC005191.1-201ENST00000603950 358 ntBASIC3.3□□□□□ -1.88
ALMS1Q8TCU4 AC079298.1-201ENST00000625026 1619 ntBASIC3.3□□□□□ -1.88
ALMS1Q8TCU4 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
ALMS1Q8TCU4 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
ALMS1Q8TCU4 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
ALMS1Q8TCU4 GCNT3-201ENST00000396065 4933 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
ALMS1Q8TCU4 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
ALMS1Q8TCU4 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
ALMS1Q8TCU4 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC3.3□□□□□ -1.88
ALMS1Q8TCU4 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
ALMS1Q8TCU4 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC3.3□□□□□ -1.88
ALMS1Q8TCU4 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
ALMS1Q8TCU4 JPX-212ENST00000639185 9658 ntTSL 5 BASIC3.3□□□□□ -1.88
ALMS1Q8TCU4 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
ALMS1Q8TCU4 RPS27AP12-201ENST00000429552 465 ntBASIC3.3□□□□□ -1.88
ALMS1Q8TCU4 BX323845.1-201ENST00000432417 179 ntBASIC3.3□□□□□ -1.88
ALMS1Q8TCU4 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms