Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 RNA5SP216-201ENST00000516111 123 ntBASIC7.52□□□□□ -1.21
RNF135Q8IUD6 RNU6-1261P-201ENST00000517194 104 ntBASIC7.52□□□□□ -1.21
RNF135Q8IUD6 AC011853.1-201ENST00000518911 454 ntBASIC7.52□□□□□ -1.21
RNF135Q8IUD6 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC7.52□□□□□ -1.21
RNF135Q8IUD6 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
RNF135Q8IUD6 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC7.52□□□□□ -1.21
RNF135Q8IUD6 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC7.52□□□□□ -1.21
RNF135Q8IUD6 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC7.52□□□□□ -1.21
RNF135Q8IUD6 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC7.52□□□□□ -1.21
RNF135Q8IUD6 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC7.52□□□□□ -1.21
RNF135Q8IUD6 MT1CP-201ENST00000567054 174 ntBASIC7.52□□□□□ -1.21
RNF135Q8IUD6 MIR5697-201ENST00000578045 78 ntBASIC7.52□□□□□ -1.21
RNF135Q8IUD6 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
RNF135Q8IUD6 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC7.52□□□□□ -1.21
RNF135Q8IUD6 MIR4732-201ENST00000581873 76 ntBASIC7.52□□□□□ -1.21
RNF135Q8IUD6 RN7SL178P-201ENST00000582930 304 ntBASIC7.52□□□□□ -1.21
RNF135Q8IUD6 LLPHP1-201ENST00000603571 367 ntBASIC7.52□□□□□ -1.21
RNF135Q8IUD6 AC103792.1-201ENST00000603591 919 ntBASIC7.52□□□□□ -1.21
RNF135Q8IUD6 AC091488.1-201ENST00000604239 660 ntBASIC7.52□□□□□ -1.21
RNF135Q8IUD6 AC015982.1-201ENST00000608113 465 ntBASIC7.52□□□□□ -1.21
RNF135Q8IUD6 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
RNF135Q8IUD6 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC7.52□□□□□ -1.21
RNF135Q8IUD6 AC010338.1-201ENST00000621823 717 ntBASIC7.52□□□□□ -1.21
RNF135Q8IUD6 AC073592.6-201ENST00000624271 415 ntBASIC7.52□□□□□ -1.21
RNF135Q8IUD6 AP003400.3-201ENST00000624904 346 ntBASIC7.52□□□□□ -1.21
RNF135Q8IUD6 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RNF135Q8IUD6 AC026398.1-201ENST00000413683 3126 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
RNF135Q8IUD6 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
RNF135Q8IUD6 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RNF135Q8IUD6 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RNF135Q8IUD6 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RNF135Q8IUD6 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC7.52□□□□□ -1.21
RNF135Q8IUD6 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
RNF135Q8IUD6 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
RNF135Q8IUD6 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC7.52□□□□□ -1.21
RNF135Q8IUD6 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RNF135Q8IUD6 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
RNF135Q8IUD6 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RNF135Q8IUD6 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC7.52□□□□□ -1.21
RNF135Q8IUD6 CCL16-205ENST00000611905 1506 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RNF135Q8IUD6 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.21
RNF135Q8IUD6 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RNF135Q8IUD6 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RNF135Q8IUD6 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
RNF135Q8IUD6 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
RNF135Q8IUD6 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
RNF135Q8IUD6 AP003471.1-202ENST00000319051 1988 ntBASIC7.51□□□□□ -1.21
RNF135Q8IUD6 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
RNF135Q8IUD6 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
RNF135Q8IUD6 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
RNF135Q8IUD6 AC011374.1-201ENST00000564471 1567 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
RNF135Q8IUD6 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
RNF135Q8IUD6 MKL2-209ENST00000574045 3309 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
RNF135Q8IUD6 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
RNF135Q8IUD6 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
RNF135Q8IUD6 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
RNF135Q8IUD6 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
RNF135Q8IUD6 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
RNF135Q8IUD6 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
RNF135Q8IUD6 AC026310.1-201ENST00000396004 378 ntBASIC7.51□□□□□ -1.21
RNF135Q8IUD6 RN7SKP86-201ENST00000410454 332 ntBASIC7.51□□□□□ -1.21
RNF135Q8IUD6 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
RNF135Q8IUD6 AL022100.1-202ENST00000421214 548 ntBASIC7.51□□□□□ -1.21
RNF135Q8IUD6 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC7.51□□□□□ -1.21
RNF135Q8IUD6 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
RNF135Q8IUD6 FDPSP1-201ENST00000424976 1071 ntBASIC7.51□□□□□ -1.21
RNF135Q8IUD6 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC7.51□□□□□ -1.21
RNF135Q8IUD6 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC7.51□□□□□ -1.21
RNF135Q8IUD6 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC7.51□□□□□ -1.21
RNF135Q8IUD6 AC093019.1-201ENST00000443135 252 ntBASIC7.51□□□□□ -1.21
RNF135Q8IUD6 AL935212.3-201ENST00000450729 284 ntBASIC7.51□□□□□ -1.21
RNF135Q8IUD6 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC7.51□□□□□ -1.21
RNF135Q8IUD6 AC091564.1-201ENST00000464563 479 ntBASIC7.51□□□□□ -1.21
RNF135Q8IUD6 UOX-201ENST00000471089 899 ntBASIC7.51□□□□□ -1.21
RNF135Q8IUD6 AC114786.4-201ENST00000508771 728 ntBASIC7.51□□□□□ -1.21
RNF135Q8IUD6 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC7.51□□□□□ -1.21
RNF135Q8IUD6 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC7.51□□□□□ -1.21
RNF135Q8IUD6 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC7.51□□□□□ -1.21
RNF135Q8IUD6 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC7.51□□□□□ -1.21
RNF135Q8IUD6 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
RNF135Q8IUD6 DUX4L52-201ENST00000549363 777 ntBASIC7.51□□□□□ -1.21
RNF135Q8IUD6 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
RNF135Q8IUD6 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC7.51□□□□□ -1.21
RNF135Q8IUD6 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC7.51□□□□□ -1.21
RNF135Q8IUD6 DYNLL1P1-201ENST00000595442 269 ntBASIC7.51□□□□□ -1.21
RNF135Q8IUD6 PRR13P5-201ENST00000596581 442 ntBASIC7.51□□□□□ -1.21
RNF135Q8IUD6 XIST-210ENST00000602863 775 ntTSL 3 BASIC7.51□□□□□ -1.21
RNF135Q8IUD6 AL139286.1-201ENST00000604465 483 ntBASIC7.51□□□□□ -1.21
RNF135Q8IUD6 AL009028.1-201ENST00000604895 802 ntBASIC7.51□□□□□ -1.21
RNF135Q8IUD6 MIR6729-201ENST00000618194 65 ntBASIC7.51□□□□□ -1.21
RNF135Q8IUD6 AL161420.1-201ENST00000619393 264 ntBASIC7.51□□□□□ -1.21
RNF135Q8IUD6 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC7.51□□□□□ -1.21
RNF135Q8IUD6 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC7.51□□□□□ -1.21
RNF135Q8IUD6 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
RNF135Q8IUD6 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC7.51□□□□□ -1.21
RNF135Q8IUD6 CDK15-201ENST00000260967 1635 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
RNF135Q8IUD6 UAP1-203ENST00000367925 2069 ntAPPRIS ALT1 TSL 5 BASIC7.51□□□□□ -1.21
RNF135Q8IUD6 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
RNF135Q8IUD6 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
RNF135Q8IUD6 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms