Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AC007159.1-201ENST00000566529 4706 ntBASIC7.29□□□□□ -1.24
FOXR1Q6PIV2 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
FOXR1Q6PIV2 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC7.29□□□□□ -1.24
FOXR1Q6PIV2 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
FOXR1Q6PIV2 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 METTL21EP-201ENST00000298105 713 ntBASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 RNU6-463P-201ENST00000384340 107 ntBASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 MIR498-201ENST00000385134 124 ntBASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 RPS3AP36-201ENST00000398190 775 ntBASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 OR7E101P-201ENST00000400428 513 ntBASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 GSTA9P-201ENST00000406231 611 ntBASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 SNORA11D-201ENST00000408548 128 ntBASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 SNORA11E-201ENST00000408778 128 ntBASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 AP000357.1-201ENST00000409926 1165 ntBASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 AC018630.2-202ENST00000422992 927 ntBASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 SAR1AP4-201ENST00000429225 591 ntBASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 H3F3BP1-201ENST00000440551 403 ntBASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 AL590639.1-201ENST00000456484 337 ntBASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 RPS20P4-201ENST00000461659 355 ntBASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 CBX5P1-201ENST00000468470 561 ntBASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 RPL39P36-201ENST00000490784 156 ntBASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 NDUFB4P2-201ENST00000509515 391 ntBASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 AC120036.3-201ENST00000517826 292 ntBASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 ST13P6-201ENST00000522430 1102 ntBASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 OR5M7P-201ENST00000526140 972 ntBASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 FXNP1-201ENST00000555153 337 ntBASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 AL355375.2-201ENST00000574825 175 ntBASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 MIR4301-201ENST00000577203 66 ntBASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 SIGLEC31P-201ENST00000594237 551 ntBASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 AL390058.1-201ENST00000603834 629 ntBASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 AC093788.1-201ENST00000609356 927 ntBASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 AL352984.2-201ENST00000611153 546 ntBASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 AL161931.1-201ENST00000612768 246 ntBASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 AC006335.3-201ENST00000613408 292 ntBASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 AC233702.2-201ENST00000618784 583 ntTSL 4 BASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 AC243725.1-201ENST00000637164 436 ntBASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 SOCS5P5-201ENST00000402732 1586 ntBASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 UGT2B24P-201ENST00000514441 1597 ntBASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC7.28□□□□□ -1.24
FOXR1Q6PIV2 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
FOXR1Q6PIV2 C1orf131-203ENST00000366651 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.24
FOXR1Q6PIV2 VN2R3P-201ENST00000422626 1412 ntBASIC7.27□□□□□ -1.24
FOXR1Q6PIV2 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC7.27□□□□□ -1.24
FOXR1Q6PIV2 AL161901.1-201ENST00000624954 3425 ntBASIC7.27□□□□□ -1.24
FOXR1Q6PIV2 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
FOXR1Q6PIV2 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC7.27□□□□□ -1.25
FOXR1Q6PIV2 TNPO1P2-201ENST00000426249 2665 ntBASIC7.27□□□□□ -1.25
FOXR1Q6PIV2 AC073055.1-201ENST00000456901 1621 ntBASIC7.27□□□□□ -1.25
FOXR1Q6PIV2 ATP5A1P10-201ENST00000622403 1603 ntBASIC7.27□□□□□ -1.25
FOXR1Q6PIV2 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
FOXR1Q6PIV2 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC7.27□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms