Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.65□□□□□ -1.51
RNF220Q5VTB9 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
RNF220Q5VTB9 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
RNF220Q5VTB9 AL158152.1-201ENST00000602652 1435 ntBASIC5.65□□□□□ -1.51
RNF220Q5VTB9 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.65□□□□□ -1.51
RNF220Q5VTB9 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
RNF220Q5VTB9 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
RNF220Q5VTB9 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.64□□□□□ -1.51
RNF220Q5VTB9 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RNF220Q5VTB9 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RNF220Q5VTB9 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.64□□□□□ -1.51
RNF220Q5VTB9 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
RNF220Q5VTB9 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RNF220Q5VTB9 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.64□□□□□ -1.51
RNF220Q5VTB9 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RNF220Q5VTB9 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RNF220Q5VTB9 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RNF220Q5VTB9 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
RNF220Q5VTB9 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
RNF220Q5VTB9 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.64□□□□□ -1.51
RNF220Q5VTB9 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RNF220Q5VTB9 Y_RNA.472-201ENST00000384322 102 ntBASIC5.64□□□□□ -1.51
RNF220Q5VTB9 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
RNF220Q5VTB9 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RNF220Q5VTB9 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RNF220Q5VTB9 RNU6-77P-201ENST00000410554 91 ntBASIC5.64□□□□□ -1.51
RNF220Q5VTB9 RN7SKP144-201ENST00000411108 279 ntBASIC5.64□□□□□ -1.51
RNF220Q5VTB9 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC5.64□□□□□ -1.51
RNF220Q5VTB9 AL596448.1-201ENST00000415024 392 ntBASIC5.64□□□□□ -1.51
RNF220Q5VTB9 PTCD2P2-201ENST00000415579 1095 ntBASIC5.64□□□□□ -1.51
RNF220Q5VTB9 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.64□□□□□ -1.51
RNF220Q5VTB9 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.64□□□□□ -1.51
RNF220Q5VTB9 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.64□□□□□ -1.51
RNF220Q5VTB9 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC5.64□□□□□ -1.51
RNF220Q5VTB9 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC5.64□□□□□ -1.51
RNF220Q5VTB9 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.64□□□□□ -1.51
RNF220Q5VTB9 HMGB1P45-201ENST00000435986 653 ntBASIC5.64□□□□□ -1.51
RNF220Q5VTB9 RPL23AP19-201ENST00000436229 369 ntBASIC5.64□□□□□ -1.51
RNF220Q5VTB9 AC234064.1-201ENST00000436312 247 ntBASIC5.64□□□□□ -1.51
RNF220Q5VTB9 AC092601.1-201ENST00000444526 383 ntBASIC5.64□□□□□ -1.51
RNF220Q5VTB9 TPTE2P6-202ENST00000445572 1007 ntBASIC5.64□□□□□ -1.51
RNF220Q5VTB9 AC234771.2-201ENST00000445718 597 ntBASIC5.64□□□□□ -1.51
RNF220Q5VTB9 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC5.64□□□□□ -1.51
RNF220Q5VTB9 AL606490.1-201ENST00000452266 765 ntBASIC5.64□□□□□ -1.51
RNF220Q5VTB9 NPM1P13-201ENST00000452663 865 ntBASIC5.64□□□□□ -1.51
RNF220Q5VTB9 AC083899.1-201ENST00000454465 3819 ntBASIC5.64□□□□□ -1.51
RNF220Q5VTB9 RN7SL352P-201ENST00000466002 277 ntBASIC5.64□□□□□ -1.51
RNF220Q5VTB9 AL161747.1-201ENST00000480068 358 ntBASIC5.64□□□□□ -1.51
RNF220Q5VTB9 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC5.64□□□□□ -1.51
RNF220Q5VTB9 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.64□□□□□ -1.51
RNF220Q5VTB9 HMGB1P23-201ENST00000518743 568 ntBASIC5.64□□□□□ -1.51
RNF220Q5VTB9 AC010306.1-201ENST00000523223 1117 ntBASIC5.64□□□□□ -1.51
RNF220Q5VTB9 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RNF220Q5VTB9 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC5.64□□□□□ -1.51
RNF220Q5VTB9 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.64□□□□□ -1.51
RNF220Q5VTB9 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.64□□□□□ -1.51
RNF220Q5VTB9 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC5.64□□□□□ -1.51
RNF220Q5VTB9 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC5.64□□□□□ -1.51
RNF220Q5VTB9 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.64□□□□□ -1.51
RNF220Q5VTB9 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.64□□□□□ -1.51
RNF220Q5VTB9 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.64□□□□□ -1.51
RNF220Q5VTB9 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.64□□□□□ -1.51
RNF220Q5VTB9 RN7SL66P-201ENST00000582099 264 ntBASIC5.64□□□□□ -1.51
RNF220Q5VTB9 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RNF220Q5VTB9 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.64□□□□□ -1.51
RNF220Q5VTB9 AC011891.2-201ENST00000604949 397 ntBASIC5.64□□□□□ -1.51
RNF220Q5VTB9 AC023813.4-201ENST00000607580 580 ntBASIC5.64□□□□□ -1.51
RNF220Q5VTB9 AC079395.3-201ENST00000615161 484 ntBASIC5.64□□□□□ -1.51
RNF220Q5VTB9 AC023509.5-201ENST00000617434 807 ntBASIC5.64□□□□□ -1.51
RNF220Q5VTB9 AL122023.1-201ENST00000622847 530 ntBASIC5.64□□□□□ -1.51
RNF220Q5VTB9 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.64□□□□□ -1.51
RNF220Q5VTB9 UGP2-231ENST00000627474 264 ntTSL 5 BASIC5.64□□□□□ -1.51
RNF220Q5VTB9 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
RNF220Q5VTB9 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
RNF220Q5VTB9 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.64□□□□□ -1.51
RNF220Q5VTB9 AC104446.1-201ENST00000613728 1321 ntBASIC5.64□□□□□ -1.51
RNF220Q5VTB9 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RNF220Q5VTB9 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.64□□□□□ -1.51
RNF220Q5VTB9 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.64□□□□□ -1.51
RNF220Q5VTB9 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.64□□□□□ -1.51
RNF220Q5VTB9 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
RNF220Q5VTB9 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
RNF220Q5VTB9 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.63□□□□□ -1.51
RNF220Q5VTB9 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.63□□□□□ -1.51
RNF220Q5VTB9 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RNF220Q5VTB9 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.63□□□□□ -1.51
RNF220Q5VTB9 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.63□□□□□ -1.51
RNF220Q5VTB9 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.63□□□□□ -1.51
RNF220Q5VTB9 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC5.63□□□□□ -1.51
RNF220Q5VTB9 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
RNF220Q5VTB9 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
RNF220Q5VTB9 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
RNF220Q5VTB9 AL591135.1-201ENST00000401578 5914 ntBASIC5.63□□□□□ -1.51
RNF220Q5VTB9 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RNF220Q5VTB9 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.63□□□□□ -1.51
RNF220Q5VTB9 AC138393.1-206ENST00000540997 1886 ntBASIC5.63□□□□□ -1.51
RNF220Q5VTB9 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.63□□□□□ -1.51
RNF220Q5VTB9 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RNF220Q5VTB9 RNU6-636P-201ENST00000384598 107 ntBASIC5.63□□□□□ -1.51
RNF220Q5VTB9 MIR513B-201ENST00000385136 84 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms