Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC7.25□□□□□ -1.25
CDC42BPAQ5VT25 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CDC42BPAQ5VT25 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CDC42BPAQ5VT25 OR4K17-201ENST00000315543 1032 ntBASIC7.25□□□□□ -1.25
CDC42BPAQ5VT25 RNA5SP28-201ENST00000363841 119 ntBASIC7.25□□□□□ -1.25
CDC42BPAQ5VT25 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC7.25□□□□□ -1.25
CDC42BPAQ5VT25 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CDC42BPAQ5VT25 AL591848.1-201ENST00000413092 322 ntBASIC7.25□□□□□ -1.25
CDC42BPAQ5VT25 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC7.25□□□□□ -1.25
CDC42BPAQ5VT25 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
CDC42BPAQ5VT25 RPS3AP54-201ENST00000435535 734 ntBASIC7.25□□□□□ -1.25
CDC42BPAQ5VT25 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC7.25□□□□□ -1.25
CDC42BPAQ5VT25 AC004980.3-201ENST00000447046 365 ntBASIC7.25□□□□□ -1.25
CDC42BPAQ5VT25 RN7SL517P-201ENST00000462240 305 ntBASIC7.25□□□□□ -1.25
CDC42BPAQ5VT25 RPL7AP10-201ENST00000481016 791 ntBASIC7.25□□□□□ -1.25
CDC42BPAQ5VT25 MTND4LP2-201ENST00000502312 285 ntBASIC7.25□□□□□ -1.25
CDC42BPAQ5VT25 AC087360.1-201ENST00000518788 616 ntBASIC7.25□□□□□ -1.25
CDC42BPAQ5VT25 AC020937.1-201ENST00000519677 1013 ntBASIC7.25□□□□□ -1.25
CDC42BPAQ5VT25 AC114781.5-201ENST00000615297 108 ntBASIC7.25□□□□□ -1.25
CDC42BPAQ5VT25 RAD17P1-201ENST00000418130 2042 ntBASIC7.25□□□□□ -1.25
CDC42BPAQ5VT25 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC7.25□□□□□ -1.25
CDC42BPAQ5VT25 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC7.25□□□□□ -1.25
CDC42BPAQ5VT25 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC7.25□□□□□ -1.25
CDC42BPAQ5VT25 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CDC42BPAQ5VT25 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CDC42BPAQ5VT25 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC7.25□□□□□ -1.25
CDC42BPAQ5VT25 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC7.25□□□□□ -1.25
CDC42BPAQ5VT25 NOL8P1-201ENST00000508336 3529 ntBASIC7.25□□□□□ -1.25
CDC42BPAQ5VT25 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CDC42BPAQ5VT25 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CDC42BPAQ5VT25 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CDC42BPAQ5VT25 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CDC42BPAQ5VT25 RNA5SP453-201ENST00000362503 119 ntBASIC7.24□□□□□ -1.25
CDC42BPAQ5VT25 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC7.24□□□□□ -1.25
CDC42BPAQ5VT25 AC012519.1-201ENST00000424588 610 ntBASIC7.24□□□□□ -1.25
CDC42BPAQ5VT25 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC7.24□□□□□ -1.25
CDC42BPAQ5VT25 MTCYBP21-201ENST00000443300 1113 ntBASIC7.24□□□□□ -1.25
CDC42BPAQ5VT25 AC093824.1-201ENST00000508796 343 ntBASIC7.24□□□□□ -1.25
CDC42BPAQ5VT25 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
CDC42BPAQ5VT25 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC7.24□□□□□ -1.25
CDC42BPAQ5VT25 MRPS21P9-201ENST00000571150 257 ntBASIC7.24□□□□□ -1.25
CDC42BPAQ5VT25 AC002044.3-201ENST00000623314 541 ntBASIC7.24□□□□□ -1.25
CDC42BPAQ5VT25 AP000843.1-201ENST00000624880 701 ntBASIC7.24□□□□□ -1.25
CDC42BPAQ5VT25 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC7.24□□□□□ -1.25
CDC42BPAQ5VT25 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CDC42BPAQ5VT25 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC7.24□□□□□ -1.25
CDC42BPAQ5VT25 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CDC42BPAQ5VT25 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
CDC42BPAQ5VT25 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CDC42BPAQ5VT25 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CDC42BPAQ5VT25 SNORA71.2-201ENST00000364941 134 ntBASIC7.24□□□□□ -1.25
CDC42BPAQ5VT25 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC7.24□□□□□ -1.25
CDC42BPAQ5VT25 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC7.24□□□□□ -1.25
CDC42BPAQ5VT25 HNRNPA1P29-201ENST00000426409 879 ntBASIC7.24□□□□□ -1.25
CDC42BPAQ5VT25 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC7.24□□□□□ -1.25
CDC42BPAQ5VT25 RNA5SP116-201ENST00000516132 98 ntBASIC7.24□□□□□ -1.25
CDC42BPAQ5VT25 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC7.24□□□□□ -1.25
CDC42BPAQ5VT25 MIR3939-201ENST00000582614 106 ntBASIC7.24□□□□□ -1.25
CDC42BPAQ5VT25 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CDC42BPAQ5VT25 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CDC42BPAQ5VT25 OR14L1P-202ENST00000641545 3009 ntBASIC7.23□□□□□ -1.25
CDC42BPAQ5VT25 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC7.23□□□□□ -1.25
CDC42BPAQ5VT25 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CDC42BPAQ5VT25 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CDC42BPAQ5VT25 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CDC42BPAQ5VT25 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
CDC42BPAQ5VT25 RPL21P67-201ENST00000402896 478 ntBASIC7.23□□□□□ -1.25
CDC42BPAQ5VT25 MIR1193-201ENST00000408109 78 ntBASIC7.23□□□□□ -1.25
CDC42BPAQ5VT25 RPL31-204ENST00000409038 817 ntTSL 2 BASIC7.23□□□□□ -1.25
CDC42BPAQ5VT25 RAD23BP1-201ENST00000421404 1227 ntBASIC7.23□□□□□ -1.25
CDC42BPAQ5VT25 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC7.23□□□□□ -1.25
CDC42BPAQ5VT25 AC104763.1-201ENST00000475274 360 ntBASIC7.23□□□□□ -1.25
CDC42BPAQ5VT25 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CDC42BPAQ5VT25 AL109766.1-201ENST00000555080 552 ntBASIC7.23□□□□□ -1.25
CDC42BPAQ5VT25 AC023575.1-201ENST00000580510 358 ntBASIC7.23□□□□□ -1.25
CDC42BPAQ5VT25 MIR6716-201ENST00000613413 80 ntBASIC7.23□□□□□ -1.25
CDC42BPAQ5VT25 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
CDC42BPAQ5VT25 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CDC42BPAQ5VT25 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CDC42BPAQ5VT25 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
CDC42BPAQ5VT25 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CDC42BPAQ5VT25 AC025574.1-201ENST00000554784 1653 ntBASIC7.22□□□□□ -1.25
CDC42BPAQ5VT25 CASC19-260ENST00000641828 2001 ntBASIC7.22□□□□□ -1.25
CDC42BPAQ5VT25 AC135352.1-201ENST00000506173 1418 ntBASIC7.22□□□□□ -1.25
CDC42BPAQ5VT25 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CDC42BPAQ5VT25 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC7.22□□□□□ -1.25
CDC42BPAQ5VT25 OR52E3P-201ENST00000452083 936 ntBASIC7.22□□□□□ -1.25
CDC42BPAQ5VT25 RPL23AP24-201ENST00000458203 385 ntBASIC7.22□□□□□ -1.25
CDC42BPAQ5VT25 AC015795.1-201ENST00000513669 327 ntBASIC7.22□□□□□ -1.25
CDC42BPAQ5VT25 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC7.22□□□□□ -1.25
CDC42BPAQ5VT25 TRAV8-5-201ENST00000537369 341 ntBASIC7.22□□□□□ -1.25
CDC42BPAQ5VT25 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC7.22□□□□□ -1.25
CDC42BPAQ5VT25 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC7.22□□□□□ -1.25
CDC42BPAQ5VT25 DPPA3P2-201ENST00000553589 478 ntBASIC7.22□□□□□ -1.25
CDC42BPAQ5VT25 AGGF1P9-201ENST00000561884 913 ntBASIC7.22□□□□□ -1.25
CDC42BPAQ5VT25 MIR3138-201ENST00000585238 82 ntBASIC7.22□□□□□ -1.25
CDC42BPAQ5VT25 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC7.22□□□□□ -1.25
CDC42BPAQ5VT25 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC7.22□□□□□ -1.25
CDC42BPAQ5VT25 AC092653.1-201ENST00000608509 531 ntBASIC7.22□□□□□ -1.25
CDC42BPAQ5VT25 AL392048.1-201ENST00000613946 534 ntBASIC7.22□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms