Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 AC008079.2-201ENST00000623543 20396 ntBASIC4.49□□□□□ -1.69
FOXF1Q12946 AL022322.2-201ENST00000624072 20397 ntBASIC4.48□□□□□ -1.69
FOXF1Q12946 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.48□□□□□ -1.69
FOXF1Q12946 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
FOXF1Q12946 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
FOXF1Q12946 RN7SKP104-201ENST00000362605 328 ntBASIC4.48□□□□□ -1.69
FOXF1Q12946 RNA5SP123-201ENST00000363244 119 ntBASIC4.48□□□□□ -1.69
FOXF1Q12946 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
FOXF1Q12946 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.48□□□□□ -1.69
FOXF1Q12946 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC4.48□□□□□ -1.69
FOXF1Q12946 AL589647.1-201ENST00000402485 466 ntBASIC4.48□□□□□ -1.69
FOXF1Q12946 CHEK2P3-201ENST00000416118 248 ntBASIC4.48□□□□□ -1.69
FOXF1Q12946 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.48□□□□□ -1.69
FOXF1Q12946 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC4.48□□□□□ -1.69
FOXF1Q12946 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.48□□□□□ -1.69
FOXF1Q12946 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
FOXF1Q12946 AC093414.1-201ENST00000434712 514 ntBASIC4.48□□□□□ -1.69
FOXF1Q12946 RPL35AP21-201ENST00000437667 333 ntBASIC4.48□□□□□ -1.69
FOXF1Q12946 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.48□□□□□ -1.69
FOXF1Q12946 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.48□□□□□ -1.69
FOXF1Q12946 RPS4XP12-201ENST00000461747 709 ntBASIC4.48□□□□□ -1.69
FOXF1Q12946 AC116562.1-201ENST00000485355 781 ntBASIC4.48□□□□□ -1.69
FOXF1Q12946 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.48□□□□□ -1.69
FOXF1Q12946 RNU6ATAC39P-201ENST00000516309 149 ntBASIC4.48□□□□□ -1.69
FOXF1Q12946 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.48□□□□□ -1.69
FOXF1Q12946 AC051619.2-201ENST00000559063 397 ntBASIC4.48□□□□□ -1.69
FOXF1Q12946 TVP23CP2-201ENST00000571473 623 ntBASIC4.48□□□□□ -1.69
FOXF1Q12946 AC104687.2-201ENST00000604442 342 ntBASIC4.48□□□□□ -1.69
FOXF1Q12946 AL021707.7-201ENST00000607991 416 ntBASIC4.48□□□□□ -1.69
FOXF1Q12946 AL356752.1-201ENST00000615844 593 ntBASIC4.48□□□□□ -1.69
FOXF1Q12946 AC090510.2-201ENST00000617465 629 ntBASIC4.48□□□□□ -1.69
FOXF1Q12946 AC091905.4-201ENST00000623432 202 ntBASIC4.48□□□□□ -1.69
FOXF1Q12946 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
FOXF1Q12946 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.48□□□□□ -1.69
FOXF1Q12946 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.48□□□□□ -1.69
FOXF1Q12946 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.48□□□□□ -1.69
FOXF1Q12946 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
FOXF1Q12946 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
FOXF1Q12946 AC019072.1-201ENST00000604535 1551 ntBASIC4.48□□□□□ -1.69
FOXF1Q12946 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
FOXF1Q12946 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
FOXF1Q12946 SMG1P4-204ENST00000523028 4131 ntBASIC4.48□□□□□ -1.69
FOXF1Q12946 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
FOXF1Q12946 AC100778.3-201ENST00000580060 1750 ntBASIC4.48□□□□□ -1.69
FOXF1Q12946 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
FOXF1Q12946 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
FOXF1Q12946 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
FOXF1Q12946 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
FOXF1Q12946 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
FOXF1Q12946 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
FOXF1Q12946 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
FOXF1Q12946 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
FOXF1Q12946 AC017079.1-201ENST00000333650 415 ntBASIC4.47□□□□□ -1.69
FOXF1Q12946 AL645733.1-201ENST00000402250 217 ntBASIC4.47□□□□□ -1.69
FOXF1Q12946 QRSL1P2-201ENST00000418582 964 ntBASIC4.47□□□□□ -1.69
FOXF1Q12946 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.47□□□□□ -1.69
FOXF1Q12946 PSMD10P3-201ENST00000437000 448 ntBASIC4.47□□□□□ -1.69
FOXF1Q12946 RPL7P11-201ENST00000437586 658 ntBASIC4.47□□□□□ -1.69
FOXF1Q12946 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.47□□□□□ -1.69
FOXF1Q12946 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.47□□□□□ -1.69
FOXF1Q12946 AL356981.1-201ENST00000454879 684 ntBASIC4.47□□□□□ -1.69
FOXF1Q12946 AC073073.1-201ENST00000493920 463 ntBASIC4.47□□□□□ -1.69
FOXF1Q12946 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.47□□□□□ -1.69
FOXF1Q12946 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.47□□□□□ -1.69
FOXF1Q12946 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.47□□□□□ -1.69
FOXF1Q12946 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC4.47□□□□□ -1.69
FOXF1Q12946 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.47□□□□□ -1.69
FOXF1Q12946 SETP3-201ENST00000581726 813 ntBASIC4.47□□□□□ -1.69
FOXF1Q12946 AC037198.3-201ENST00000616754 526 ntBASIC4.47□□□□□ -1.69
FOXF1Q12946 AC112694.2-201ENST00000623697 768 ntBASIC4.47□□□□□ -1.69
FOXF1Q12946 INTS6P1-201ENST00000504674 2530 ntBASIC4.47□□□□□ -1.69
FOXF1Q12946 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
FOXF1Q12946 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
FOXF1Q12946 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.47□□□□□ -1.69
FOXF1Q12946 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
FOXF1Q12946 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
FOXF1Q12946 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
FOXF1Q12946 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.46□□□□□ -1.69
FOXF1Q12946 AC009643.2-201ENST00000603543 1448 ntBASIC4.46□□□□□ -1.69
FOXF1Q12946 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
FOXF1Q12946 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.46□□□□□ -1.69
FOXF1Q12946 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
FOXF1Q12946 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
FOXF1Q12946 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.46□□□□□ -1.7
FOXF1Q12946 AC099654.2-201ENST00000433031 1980 ntBASIC4.46□□□□□ -1.7
FOXF1Q12946 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC4.46□□□□□ -1.7
FOXF1Q12946 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
FOXF1Q12946 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.46□□□□□ -1.7
FOXF1Q12946 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
FOXF1Q12946 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
FOXF1Q12946 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.46□□□□□ -1.7
FOXF1Q12946 SNORA74A-201ENST00000364089 198 ntBASIC4.46□□□□□ -1.7
FOXF1Q12946 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
FOXF1Q12946 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
FOXF1Q12946 UBBP2-201ENST00000376781 231 ntBASIC4.46□□□□□ -1.7
FOXF1Q12946 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
FOXF1Q12946 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
FOXF1Q12946 AL357515.1-201ENST00000402967 542 ntBASIC4.46□□□□□ -1.7
FOXF1Q12946 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
FOXF1Q12946 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms