Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.18□□□□□ -1.42
YBX1P67809 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
YBX1P67809 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
YBX1P67809 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.18□□□□□ -1.42
YBX1P67809 MTND4P23-201ENST00000447723 1363 ntBASIC6.18□□□□□ -1.42
YBX1P67809 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
YBX1P67809 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
YBX1P67809 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
YBX1P67809 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
YBX1P67809 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
YBX1P67809 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
YBX1P67809 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
YBX1P67809 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.17□□□□□ -1.42
YBX1P67809 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.17□□□□□ -1.42
YBX1P67809 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
YBX1P67809 AC090181.3-201ENST00000624777 1514 ntBASIC6.17□□□□□ -1.42
YBX1P67809 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
YBX1P67809 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
YBX1P67809 RPL11P4-201ENST00000332269 436 ntBASIC6.17□□□□□ -1.42
YBX1P67809 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
YBX1P67809 SNORA70H-201ENST00000383910 135 ntBASIC6.17□□□□□ -1.42
YBX1P67809 SNORA70J-201ENST00000384182 135 ntBASIC6.17□□□□□ -1.42
YBX1P67809 RNU6-1042P-201ENST00000384204 107 ntBASIC6.17□□□□□ -1.42
YBX1P67809 AL157702.1-201ENST00000398764 426 ntBASIC6.17□□□□□ -1.42
YBX1P67809 NPM1P38-201ENST00000403835 865 ntBASIC6.17□□□□□ -1.42
YBX1P67809 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC6.17□□□□□ -1.42
YBX1P67809 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC6.17□□□□□ -1.42
YBX1P67809 AC023128.2-201ENST00000420880 1223 ntBASIC6.17□□□□□ -1.42
YBX1P67809 AL139184.1-202ENST00000422303 222 ntBASIC6.17□□□□□ -1.42
YBX1P67809 AL022400.1-201ENST00000423946 935 ntBASIC6.17□□□□□ -1.42
YBX1P67809 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC6.17□□□□□ -1.42
YBX1P67809 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC6.17□□□□□ -1.42
YBX1P67809 AC079807.1-201ENST00000429993 481 ntBASIC6.17□□□□□ -1.42
YBX1P67809 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC6.17□□□□□ -1.42
YBX1P67809 AC003989.1-201ENST00000434569 565 ntBASIC6.17□□□□□ -1.42
YBX1P67809 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC6.17□□□□□ -1.42
YBX1P67809 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.17□□□□□ -1.42
YBX1P67809 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC6.17□□□□□ -1.42
YBX1P67809 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC6.17□□□□□ -1.42
YBX1P67809 ZNF619P1-201ENST00000446539 752 ntBASIC6.17□□□□□ -1.42
YBX1P67809 AC114755.5-201ENST00000447760 831 ntBASIC6.17□□□□□ -1.42
YBX1P67809 FGF7P6-202ENST00000451282 293 ntBASIC6.17□□□□□ -1.42
YBX1P67809 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.17□□□□□ -1.42
YBX1P67809 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.17□□□□□ -1.42
YBX1P67809 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC6.17□□□□□ -1.42
YBX1P67809 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.17□□□□□ -1.42
YBX1P67809 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.17□□□□□ -1.42
YBX1P67809 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6.17□□□□□ -1.42
YBX1P67809 MTND2P33-201ENST00000506452 1031 ntBASIC6.17□□□□□ -1.42
YBX1P67809 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
YBX1P67809 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC6.17□□□□□ -1.42
YBX1P67809 RNU6-718P-201ENST00000516166 105 ntBASIC6.17□□□□□ -1.42
YBX1P67809 snoZ278.1-201ENST00000517059 112 ntBASIC6.17□□□□□ -1.42
YBX1P67809 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC6.17□□□□□ -1.42
YBX1P67809 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.17□□□□□ -1.42
YBX1P67809 AC008055.1-201ENST00000547032 609 ntBASIC6.17□□□□□ -1.42
YBX1P67809 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC6.17□□□□□ -1.42
YBX1P67809 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.17□□□□□ -1.42
YBX1P67809 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC6.17□□□□□ -1.42
YBX1P67809 AC012414.6-201ENST00000568241 401 ntBASIC6.17□□□□□ -1.42
YBX1P67809 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC6.17□□□□□ -1.42
YBX1P67809 MIR5708-201ENST00000579723 85 ntBASIC6.17□□□□□ -1.42
YBX1P67809 AC007448.1-201ENST00000582714 234 ntBASIC6.17□□□□□ -1.42
YBX1P67809 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC6.17□□□□□ -1.42
YBX1P67809 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC6.17□□□□□ -1.42
YBX1P67809 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC6.17□□□□□ -1.42
YBX1P67809 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC6.17□□□□□ -1.42
YBX1P67809 AC083899.3-201ENST00000603413 594 ntBASIC6.17□□□□□ -1.42
YBX1P67809 AC011891.2-201ENST00000604949 397 ntBASIC6.17□□□□□ -1.42
YBX1P67809 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.17□□□□□ -1.42
YBX1P67809 AL008723.3-201ENST00000608926 449 ntBASIC6.17□□□□□ -1.42
YBX1P67809 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.17□□□□□ -1.42
YBX1P67809 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.17□□□□□ -1.42
YBX1P67809 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC6.17□□□□□ -1.42
YBX1P67809 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
YBX1P67809 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
YBX1P67809 AC011477.1-204ENST00000623416 1325 ntBASIC6.17□□□□□ -1.42
YBX1P67809 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
YBX1P67809 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
YBX1P67809 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
YBX1P67809 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
YBX1P67809 TTC39DP-201ENST00000416781 1688 ntBASIC6.17□□□□□ -1.42
YBX1P67809 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.17□□□□□ -1.42
YBX1P67809 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
YBX1P67809 AC000367.1-201ENST00000452711 1766 ntBASIC6.16□□□□□ -1.42
YBX1P67809 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
YBX1P67809 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
YBX1P67809 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.16□□□□□ -1.42
YBX1P67809 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
YBX1P67809 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
YBX1P67809 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
YBX1P67809 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.16□□□□□ -1.42
YBX1P67809 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
YBX1P67809 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
YBX1P67809 AC016716.1-201ENST00000265882 708 ntBASIC6.16□□□□□ -1.42
YBX1P67809 RNA5SP485-201ENST00000365053 119 ntBASIC6.16□□□□□ -1.42
YBX1P67809 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.16□□□□□ -1.42
YBX1P67809 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
YBX1P67809 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
YBX1P67809 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms