Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
CKS1BP61024 AC104966.1-201ENST00000467010 1464 ntBASIC3.65□□□□□ -1.83
CKS1BP61024 AC095050.2-201ENST00000510748 1458 ntBASIC3.65□□□□□ -1.83
CKS1BP61024 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CKS1BP61024 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CKS1BP61024 AC100757.1-201ENST00000616872 1835 ntBASIC3.65□□□□□ -1.83
CKS1BP61024 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC3.65□□□□□ -1.83
CKS1BP61024 AC107068.1-201ENST00000563286 4218 ntBASIC3.65□□□□□ -1.83
CKS1BP61024 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CKS1BP61024 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CKS1BP61024 ALB-209ENST00000503124 1741 ntTSL 5 BASIC3.64□□□□□ -1.83
CKS1BP61024 CARF-203ENST00000414439 2099 ntTSL 2 BASIC3.64□□□□□ -1.83
CKS1BP61024 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.64□□□□□ -1.83
CKS1BP61024 ZNF733P-202ENST00000444809 1573 ntBASIC3.64□□□□□ -1.83
CKS1BP61024 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC3.64□□□□□ -1.83
CKS1BP61024 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
CKS1BP61024 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
CKS1BP61024 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CKS1BP61024 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CKS1BP61024 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC3.64□□□□□ -1.83
CKS1BP61024 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
CKS1BP61024 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC3.64□□□□□ -1.83
CKS1BP61024 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC3.64□□□□□ -1.83
CKS1BP61024 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC3.64□□□□□ -1.83
CKS1BP61024 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CKS1BP61024 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC3.64□□□□□ -1.83
CKS1BP61024 AC019050.1-201ENST00000418508 492 ntBASIC3.64□□□□□ -1.83
CKS1BP61024 FAM183DP-201ENST00000421987 399 ntBASIC3.64□□□□□ -1.83
CKS1BP61024 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
CKS1BP61024 SKP1P3-201ENST00000429280 487 ntBASIC3.64□□□□□ -1.83
CKS1BP61024 RPS26P4-201ENST00000431743 355 ntBASIC3.64□□□□□ -1.83
CKS1BP61024 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC3.64□□□□□ -1.83
CKS1BP61024 HMGB3P24-201ENST00000433260 622 ntBASIC3.64□□□□□ -1.83
CKS1BP61024 PNKDP1-201ENST00000435914 430 ntBASIC3.64□□□□□ -1.83
CKS1BP61024 AC006335.2-201ENST00000437993 330 ntBASIC3.64□□□□□ -1.83
CKS1BP61024 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC3.64□□□□□ -1.83
CKS1BP61024 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC3.64□□□□□ -1.83
CKS1BP61024 AL450023.1-201ENST00000450868 751 ntBASIC3.64□□□□□ -1.83
CKS1BP61024 DNAJB5P1-201ENST00000454004 806 ntBASIC3.64□□□□□ -1.83
CKS1BP61024 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC3.64□□□□□ -1.83
CKS1BP61024 EIF2S2P4-201ENST00000461070 984 ntBASIC3.64□□□□□ -1.83
CKS1BP61024 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC3.64□□□□□ -1.83
CKS1BP61024 UBFD1P1-201ENST00000473259 814 ntBASIC3.64□□□□□ -1.83
CKS1BP61024 RPS17P15-201ENST00000475609 349 ntBASIC3.64□□□□□ -1.83
CKS1BP61024 RN7SL583P-201ENST00000475692 287 ntBASIC3.64□□□□□ -1.83
CKS1BP61024 RBBP4P1-201ENST00000502424 1276 ntBASIC3.64□□□□□ -1.83
CKS1BP61024 NENFP3-201ENST00000503735 313 ntBASIC3.64□□□□□ -1.83
CKS1BP61024 AC021106.1-201ENST00000509020 1058 ntBASIC3.64□□□□□ -1.83
CKS1BP61024 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC3.64□□□□□ -1.83
CKS1BP61024 AC109464.1-201ENST00000511091 819 ntBASIC3.64□□□□□ -1.83
CKS1BP61024 RN7SKP99-201ENST00000517028 307 ntBASIC3.64□□□□□ -1.83
CKS1BP61024 CETN3-206ENST00000522864 738 ntTSL 3 BASIC3.64□□□□□ -1.83
CKS1BP61024 AP003033.2-201ENST00000528901 805 ntBASIC3.64□□□□□ -1.83
CKS1BP61024 HMGB1P42-201ENST00000532126 553 ntBASIC3.64□□□□□ -1.83
CKS1BP61024 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
CKS1BP61024 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC3.64□□□□□ -1.83
CKS1BP61024 IGBP1P1-201ENST00000554337 1009 ntBASIC3.64□□□□□ -1.83
CKS1BP61024 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC3.64□□□□□ -1.83
CKS1BP61024 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC3.64□□□□□ -1.83
CKS1BP61024 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC3.64□□□□□ -1.83
CKS1BP61024 AC084757.1-201ENST00000559987 490 ntBASIC3.64□□□□□ -1.83
CKS1BP61024 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.64□□□□□ -1.83
CKS1BP61024 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC3.64□□□□□ -1.83
CKS1BP61024 AC063977.5-201ENST00000601044 974 ntBASIC3.64□□□□□ -1.83
CKS1BP61024 AC108738.1-201ENST00000603703 237 ntBASIC3.64□□□□□ -1.83
CKS1BP61024 AC124916.2-201ENST00000604416 224 ntBASIC3.64□□□□□ -1.83
CKS1BP61024 uc_338.32-201ENST00000615087 172 ntBASIC3.64□□□□□ -1.83
CKS1BP61024 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CKS1BP61024 AP000648.2-201ENST00000624182 404 ntBASIC3.64□□□□□ -1.83
CKS1BP61024 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC3.64□□□□□ -1.83
CKS1BP61024 AC087565.3-203ENST00000641018 837 ntBASIC3.64□□□□□ -1.83
CKS1BP61024 OR8G3P-202ENST00000641572 1255 ntBASIC3.64□□□□□ -1.83
CKS1BP61024 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
CKS1BP61024 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CKS1BP61024 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
CKS1BP61024 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CKS1BP61024 AC114546.3-201ENST00000623582 1734 ntBASIC3.64□□□□□ -1.83
CKS1BP61024 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CKS1BP61024 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.64□□□□□ -1.83
CKS1BP61024 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CKS1BP61024 NEPNP-201ENST00000404786 1371 ntBASIC3.63□□□□□ -1.83
CKS1BP61024 AC007529.1-201ENST00000418574 2178 ntBASIC3.63□□□□□ -1.83
CKS1BP61024 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
CKS1BP61024 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.63□□□□□ -1.83
CKS1BP61024 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC3.63□□□□□ -1.83
CKS1BP61024 AL031985.3-201ENST00000565390 2449 ntBASIC3.63□□□□□ -1.83
CKS1BP61024 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CKS1BP61024 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CKS1BP61024 AP001486.2-201ENST00000561652 5113 ntBASIC3.63□□□□□ -1.83
CKS1BP61024 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC3.63□□□□□ -1.83
CKS1BP61024 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC3.63□□□□□ -1.83
CKS1BP61024 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC3.63□□□□□ -1.83
CKS1BP61024 RNA5SP232-201ENST00000364144 119 ntBASIC3.63□□□□□ -1.83
CKS1BP61024 RN7SKP6-201ENST00000364795 319 ntBASIC3.63□□□□□ -1.83
CKS1BP61024 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CKS1BP61024 AL096711.1-201ENST00000404780 554 ntBASIC3.63□□□□□ -1.83
CKS1BP61024 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC3.63□□□□□ -1.83
CKS1BP61024 NENFP1-201ENST00000419476 466 ntBASIC3.63□□□□□ -1.83
CKS1BP61024 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CKS1BP61024 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 148.2 ms