Protein–RNA interactions for Protein: P59025

RTP1, Receptor-transporting protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1P59025 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.77□□□□□ -1.33
RTP1P59025 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.77□□□□□ -1.33
RTP1P59025 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.77□□□□□ -1.33
RTP1P59025 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.77□□□□□ -1.33
RTP1P59025 AC073137.1-201ENST00000605636 634 ntBASIC6.77□□□□□ -1.33
RTP1P59025 AP000254.1-201ENST00000609934 520 ntBASIC6.77□□□□□ -1.33
RTP1P59025 AP000255.1-201ENST00000610276 676 ntBASIC6.77□□□□□ -1.33
RTP1P59025 AC024257.5-201ENST00000612739 531 ntBASIC6.77□□□□□ -1.33
RTP1P59025 AP003789.1-201ENST00000617737 605 ntBASIC6.77□□□□□ -1.33
RTP1P59025 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
RTP1P59025 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
RTP1P59025 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
RTP1P59025 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC6.77□□□□□ -1.33
RTP1P59025 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
RTP1P59025 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
RTP1P59025 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.77□□□□□ -1.33
RTP1P59025 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
RTP1P59025 OR4G1P-202ENST00000641173 1788 ntBASIC6.77□□□□□ -1.33
RTP1P59025 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
RTP1P59025 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
RTP1P59025 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.77□□□□□ -1.33
RTP1P59025 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
RTP1P59025 AC235565.1-201ENST00000456962 1325 ntBASIC6.76□□□□□ -1.33
RTP1P59025 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
RTP1P59025 AC007342.5-201ENST00000571340 2142 ntBASIC6.76□□□□□ -1.33
RTP1P59025 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
RTP1P59025 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
RTP1P59025 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
RTP1P59025 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
RTP1P59025 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
RTP1P59025 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
RTP1P59025 RNU105B-201ENST00000364478 208 ntBASIC6.76□□□□□ -1.33
RTP1P59025 RNU6-171P-201ENST00000384354 107 ntBASIC6.76□□□□□ -1.33
RTP1P59025 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
RTP1P59025 AL096829.1-201ENST00000413677 457 ntBASIC6.76□□□□□ -1.33
RTP1P59025 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC6.76□□□□□ -1.33
RTP1P59025 RPL35AP3-201ENST00000414680 288 ntBASIC6.76□□□□□ -1.33
RTP1P59025 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC6.76□□□□□ -1.33
RTP1P59025 RPS15AP30-201ENST00000420976 390 ntBASIC6.76□□□□□ -1.33
RTP1P59025 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC6.76□□□□□ -1.33
RTP1P59025 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
RTP1P59025 H3F3BP1-201ENST00000440551 403 ntBASIC6.76□□□□□ -1.33
RTP1P59025 MTND5P2-201ENST00000442927 1142 ntBASIC6.76□□□□□ -1.33
RTP1P59025 TAF9P1-201ENST00000445421 515 ntBASIC6.76□□□□□ -1.33
RTP1P59025 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC6.76□□□□□ -1.33
RTP1P59025 TAF9P2-201ENST00000454958 515 ntBASIC6.76□□□□□ -1.33
RTP1P59025 AC073594.1-201ENST00000462065 364 ntBASIC6.76□□□□□ -1.33
RTP1P59025 RN7SL269P-201ENST00000467795 305 ntBASIC6.76□□□□□ -1.33
RTP1P59025 AC022336.1-201ENST00000475510 337 ntBASIC6.76□□□□□ -1.33
RTP1P59025 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC6.76□□□□□ -1.33
RTP1P59025 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC6.76□□□□□ -1.33
RTP1P59025 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC6.76□□□□□ -1.33
RTP1P59025 AC109481.1-201ENST00000509173 282 ntBASIC6.76□□□□□ -1.33
RTP1P59025 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC6.76□□□□□ -1.33
RTP1P59025 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC6.76□□□□□ -1.33
RTP1P59025 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC6.76□□□□□ -1.33
RTP1P59025 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC6.76□□□□□ -1.33
RTP1P59025 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.76□□□□□ -1.33
RTP1P59025 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC6.76□□□□□ -1.33
RTP1P59025 AC090695.1-201ENST00000561269 1222 ntBASIC6.76□□□□□ -1.33
RTP1P59025 ZNF415P1-201ENST00000582279 1166 ntBASIC6.76□□□□□ -1.33
RTP1P59025 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC6.76□□□□□ -1.33
RTP1P59025 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC6.76□□□□□ -1.33
RTP1P59025 FAM27E4-201ENST00000605259 342 ntBASIC6.76□□□□□ -1.33
RTP1P59025 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC6.76□□□□□ -1.33
RTP1P59025 AC015540.1-201ENST00000615828 501 ntBASIC6.76□□□□□ -1.33
RTP1P59025 AC096861.1-201ENST00000616652 240 ntBASIC6.76□□□□□ -1.33
RTP1P59025 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.76□□□□□ -1.33
RTP1P59025 AL121890.3-201ENST00000618494 516 ntBASIC6.76□□□□□ -1.33
RTP1P59025 AC010608.2-201ENST00000624830 470 ntBASIC6.76□□□□□ -1.33
RTP1P59025 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC6.76□□□□□ -1.33
RTP1P59025 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.76□□□□□ -1.33
RTP1P59025 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.76□□□□□ -1.33
RTP1P59025 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.76□□□□□ -1.33
RTP1P59025 GNL2P1-201ENST00000451274 2190 ntBASIC6.76□□□□□ -1.33
RTP1P59025 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.76□□□□□ -1.33
RTP1P59025 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
RTP1P59025 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
RTP1P59025 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
RTP1P59025 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
RTP1P59025 OFD1P17-201ENST00000437639 3018 ntBASIC6.76□□□□□ -1.33
RTP1P59025 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
RTP1P59025 KARSP3-201ENST00000571212 1504 ntBASIC6.76□□□□□ -1.33
RTP1P59025 AC005832.2-201ENST00000538921 1430 ntBASIC6.76□□□□□ -1.33
RTP1P59025 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RTP1P59025 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RTP1P59025 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
RTP1P59025 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
RTP1P59025 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RTP1P59025 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
RTP1P59025 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.75□□□□□ -1.33
RTP1P59025 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
RTP1P59025 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RTP1P59025 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RTP1P59025 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RTP1P59025 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.75□□□□□ -1.33
RTP1P59025 AP004289.1-201ENST00000436307 2205 ntBASIC6.75□□□□□ -1.33
RTP1P59025 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RTP1P59025 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
RTP1P59025 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 144.5 ms