Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.32□□□□□ -1.56
CLDN2P57739 AC073137.1-201ENST00000605636 634 ntBASIC5.32□□□□□ -1.56
CLDN2P57739 AC008759.3-201ENST00000613300 508 ntBASIC5.32□□□□□ -1.56
CLDN2P57739 AL352984.2-202ENST00000613699 155 ntBASIC5.32□□□□□ -1.56
CLDN2P57739 AC104763.3-201ENST00000613765 618 ntBASIC5.32□□□□□ -1.56
CLDN2P57739 AC022960.3-201ENST00000619794 441 ntBASIC5.32□□□□□ -1.56
CLDN2P57739 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
CLDN2P57739 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CLDN2P57739 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.32□□□□□ -1.56
CLDN2P57739 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CLDN2P57739 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLDN2P57739 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CLDN2P57739 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
CLDN2P57739 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.32□□□□□ -1.56
CLDN2P57739 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CLDN2P57739 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLDN2P57739 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLDN2P57739 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.31□□□□□ -1.56
CLDN2P57739 HSPA8P15-201ENST00000401676 786 ntBASIC5.31□□□□□ -1.56
CLDN2P57739 RNU4-27P-201ENST00000410889 139 ntBASIC5.31□□□□□ -1.56
CLDN2P57739 AC006065.1-201ENST00000422539 802 ntBASIC5.31□□□□□ -1.56
CLDN2P57739 AL590762.4-201ENST00000425885 253 ntBASIC5.31□□□□□ -1.56
CLDN2P57739 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.31□□□□□ -1.56
CLDN2P57739 PSMD10P3-201ENST00000437000 448 ntBASIC5.31□□□□□ -1.56
CLDN2P57739 HNRNPDLP2-201ENST00000455248 751 ntBASIC5.31□□□□□ -1.56
CLDN2P57739 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.31□□□□□ -1.56
CLDN2P57739 AC093801.2-201ENST00000503966 1050 ntBASIC5.31□□□□□ -1.56
CLDN2P57739 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.31□□□□□ -1.56
CLDN2P57739 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.31□□□□□ -1.56
CLDN2P57739 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.31□□□□□ -1.56
CLDN2P57739 YWHABP2-201ENST00000540201 713 ntBASIC5.31□□□□□ -1.56
CLDN2P57739 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.31□□□□□ -1.56
CLDN2P57739 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.31□□□□□ -1.56
CLDN2P57739 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.31□□□□□ -1.56
CLDN2P57739 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC5.31□□□□□ -1.56
CLDN2P57739 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.31□□□□□ -1.56
CLDN2P57739 AC023158.1-201ENST00000561632 1025 ntBASIC5.31□□□□□ -1.56
CLDN2P57739 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC5.31□□□□□ -1.56
CLDN2P57739 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC5.31□□□□□ -1.56
CLDN2P57739 AC006116.3-201ENST00000592968 361 ntBASIC5.31□□□□□ -1.56
CLDN2P57739 AP002884.5-201ENST00000595053 1132 ntBASIC5.31□□□□□ -1.56
CLDN2P57739 SNX6P1-201ENST00000601728 1224 ntBASIC5.31□□□□□ -1.56
CLDN2P57739 AC005034.4-201ENST00000603612 899 ntBASIC5.31□□□□□ -1.56
CLDN2P57739 TAS2R6P-201ENST00000605022 826 ntBASIC5.31□□□□□ -1.56
CLDN2P57739 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.31□□□□□ -1.56
CLDN2P57739 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5.31□□□□□ -1.56
CLDN2P57739 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.31□□□□□ -1.56
CLDN2P57739 AL138960.1-201ENST00000613838 513 ntBASIC5.31□□□□□ -1.56
CLDN2P57739 AC068870.2-201ENST00000620635 389 ntBASIC5.31□□□□□ -1.56
CLDN2P57739 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CLDN2P57739 AP003476.1-201ENST00000623984 516 ntBASIC5.31□□□□□ -1.56
CLDN2P57739 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
CLDN2P57739 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.31□□□□□ -1.56
CLDN2P57739 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CLDN2P57739 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CLDN2P57739 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.31□□□□□ -1.56
CLDN2P57739 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.31□□□□□ -1.56
CLDN2P57739 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLDN2P57739 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLDN2P57739 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CLDN2P57739 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
CLDN2P57739 TMEM161BP1-201ENST00000457388 1457 ntBASIC5.31□□□□□ -1.56
CLDN2P57739 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.31□□□□□ -1.56
CLDN2P57739 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLDN2P57739 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CLDN2P57739 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CLDN2P57739 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
CLDN2P57739 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLDN2P57739 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CLDN2P57739 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLDN2P57739 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CLDN2P57739 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CLDN2P57739 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CLDN2P57739 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CLDN2P57739 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.3□□□□□ -1.56
CLDN2P57739 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
CLDN2P57739 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CLDN2P57739 RNA5SP514-201ENST00000363717 111 ntBASIC5.3□□□□□ -1.56
CLDN2P57739 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CLDN2P57739 HMGB1P10-201ENST00000395823 563 ntBASIC5.3□□□□□ -1.56
CLDN2P57739 RSL24D1P1-201ENST00000404972 493 ntBASIC5.3□□□□□ -1.56
CLDN2P57739 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.3□□□□□ -1.56
CLDN2P57739 RN7SKP126-201ENST00000411143 300 ntBASIC5.3□□□□□ -1.56
CLDN2P57739 RPA2P2-201ENST00000419698 796 ntBASIC5.3□□□□□ -1.56
CLDN2P57739 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC5.3□□□□□ -1.56
CLDN2P57739 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.3□□□□□ -1.56
CLDN2P57739 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.3□□□□□ -1.56
CLDN2P57739 PA2G4P6-201ENST00000438325 1197 ntBASIC5.3□□□□□ -1.56
CLDN2P57739 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC5.3□□□□□ -1.56
CLDN2P57739 CEACAMP7-201ENST00000444105 496 ntBASIC5.3□□□□□ -1.56
CLDN2P57739 AC023512.1-201ENST00000444513 499 ntBASIC5.3□□□□□ -1.56
CLDN2P57739 RPL7P61-201ENST00000451721 751 ntBASIC5.3□□□□□ -1.56
CLDN2P57739 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.3□□□□□ -1.56
CLDN2P57739 SNORD125-201ENST00000459538 96 ntBASIC5.3□□□□□ -1.56
CLDN2P57739 AC009127.1-201ENST00000467090 155 ntBASIC5.3□□□□□ -1.56
CLDN2P57739 AC018635.1-201ENST00000468292 1030 ntBASIC5.3□□□□□ -1.56
CLDN2P57739 AC058823.1-201ENST00000485315 474 ntBASIC5.3□□□□□ -1.56
CLDN2P57739 RPS4XP20-201ENST00000505751 772 ntBASIC5.3□□□□□ -1.56
CLDN2P57739 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.3□□□□□ -1.56
CLDN2P57739 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms