Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
CLDN20P56880 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC5□□□□□ -1.61
CLDN20P56880 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CLDN20P56880 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5□□□□□ -1.61
CLDN20P56880 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5□□□□□ -1.61
CLDN20P56880 OR9K1P-201ENST00000326513 941 ntBASIC5□□□□□ -1.61
CLDN20P56880 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5□□□□□ -1.61
CLDN20P56880 RNA5SP132-201ENST00000364725 118 ntBASIC5□□□□□ -1.61
CLDN20P56880 RNU4-2-201ENST00000365668 141 ntBASIC5□□□□□ -1.61
CLDN20P56880 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CLDN20P56880 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5□□□□□ -1.61
CLDN20P56880 MIR143-201ENST00000385300 106 ntBASIC5□□□□□ -1.61
CLDN20P56880 U3.28-201ENST00000391249 210 ntBASIC5□□□□□ -1.61
CLDN20P56880 AL034403.1-201ENST00000399414 885 ntBASIC5□□□□□ -1.61
CLDN20P56880 OR3A2-201ENST00000408891 1076 ntBASIC5□□□□□ -1.61
CLDN20P56880 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5□□□□□ -1.61
CLDN20P56880 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5□□□□□ -1.61
CLDN20P56880 RNU4-27P-201ENST00000410889 139 ntBASIC5□□□□□ -1.61
CLDN20P56880 NPM1P40-201ENST00000412758 733 ntBASIC5□□□□□ -1.61
CLDN20P56880 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5□□□□□ -1.61
CLDN20P56880 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5□□□□□ -1.61
CLDN20P56880 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5□□□□□ -1.61
CLDN20P56880 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC5□□□□□ -1.61
CLDN20P56880 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5□□□□□ -1.61
CLDN20P56880 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5□□□□□ -1.61
CLDN20P56880 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5□□□□□ -1.61
CLDN20P56880 LINC02210-201ENST00000444561 288 ntBASIC5□□□□□ -1.61
CLDN20P56880 AL157827.1-201ENST00000447622 132 ntBASIC5□□□□□ -1.61
CLDN20P56880 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5□□□□□ -1.61
CLDN20P56880 RPS4XP12-201ENST00000461747 709 ntBASIC5□□□□□ -1.61
CLDN20P56880 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5□□□□□ -1.61
CLDN20P56880 RPL32P14-201ENST00000463196 378 ntBASIC5□□□□□ -1.61
CLDN20P56880 RN7SL184P-201ENST00000488308 297 ntBASIC5□□□□□ -1.61
CLDN20P56880 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5□□□□□ -1.61
CLDN20P56880 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC5□□□□□ -1.61
CLDN20P56880 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC5□□□□□ -1.61
CLDN20P56880 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5□□□□□ -1.61
CLDN20P56880 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC5□□□□□ -1.61
CLDN20P56880 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5□□□□□ -1.61
CLDN20P56880 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5□□□□□ -1.61
CLDN20P56880 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5□□□□□ -1.61
CLDN20P56880 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5□□□□□ -1.61
CLDN20P56880 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5□□□□□ -1.61
CLDN20P56880 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5□□□□□ -1.61
CLDN20P56880 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC5□□□□□ -1.61
CLDN20P56880 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5□□□□□ -1.61
CLDN20P56880 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5□□□□□ -1.61
CLDN20P56880 SNORD39.2-201ENST00000579995 76 ntBASIC5□□□□□ -1.61
CLDN20P56880 MIR7853-201ENST00000584820 132 ntBASIC5□□□□□ -1.61
CLDN20P56880 OR1AB1P-201ENST00000585564 761 ntBASIC5□□□□□ -1.61
CLDN20P56880 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5□□□□□ -1.61
CLDN20P56880 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5□□□□□ -1.61
CLDN20P56880 AC068020.1-201ENST00000594215 661 ntBASIC5□□□□□ -1.61
CLDN20P56880 BNIP3P40-201ENST00000596017 556 ntBASIC5□□□□□ -1.61
CLDN20P56880 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC5□□□□□ -1.61
CLDN20P56880 AC012616.1-201ENST00000600294 197 ntBASIC5□□□□□ -1.61
CLDN20P56880 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5□□□□□ -1.61
CLDN20P56880 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5□□□□□ -1.61
CLDN20P56880 AC130352.1-201ENST00000602979 661 ntBASIC5□□□□□ -1.61
CLDN20P56880 AC112503.2-201ENST00000609005 552 ntBASIC5□□□□□ -1.61
CLDN20P56880 AL139124.1-201ENST00000609123 421 ntBASIC5□□□□□ -1.61
CLDN20P56880 AC104763.3-201ENST00000613765 618 ntBASIC5□□□□□ -1.61
CLDN20P56880 AL118522.2-201ENST00000616045 615 ntBASIC5□□□□□ -1.61
CLDN20P56880 BNIP3P41-202ENST00000616656 861 ntBASIC5□□□□□ -1.61
CLDN20P56880 OR8G7P-201ENST00000616658 848 ntBASIC5□□□□□ -1.61
CLDN20P56880 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC5□□□□□ -1.61
CLDN20P56880 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5□□□□□ -1.61
CLDN20P56880 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
CLDN20P56880 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5□□□□□ -1.61
CLDN20P56880 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
CLDN20P56880 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5□□□□□ -1.61
CLDN20P56880 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
CLDN20P56880 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5□□□□□ -1.61
CLDN20P56880 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5□□□□□ -1.61
CLDN20P56880 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
CLDN20P56880 SPATA2P1-201ENST00000431223 2055 ntBASIC5□□□□□ -1.61
CLDN20P56880 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5□□□□□ -1.61
CLDN20P56880 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC4.99□□□□□ -1.61
CLDN20P56880 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.99□□□□□ -1.61
CLDN20P56880 AC025574.1-201ENST00000554784 1653 ntBASIC4.99□□□□□ -1.61
CLDN20P56880 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
CLDN20P56880 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLDN20P56880 AC079298.1-201ENST00000625026 1619 ntBASIC4.99□□□□□ -1.61
CLDN20P56880 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC4.99□□□□□ -1.61
CLDN20P56880 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
CLDN20P56880 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC4.99□□□□□ -1.61
CLDN20P56880 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.99□□□□□ -1.61
CLDN20P56880 MIR16-2-201ENST00000362117 81 ntBASIC4.99□□□□□ -1.61
CLDN20P56880 RNA5SP319-201ENST00000362768 119 ntBASIC4.99□□□□□ -1.61
CLDN20P56880 RNA5SP234-201ENST00000363916 119 ntBASIC4.99□□□□□ -1.61
CLDN20P56880 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC4.99□□□□□ -1.61
CLDN20P56880 MIR551A-201ENST00000385042 96 ntBASIC4.99□□□□□ -1.61
CLDN20P56880 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLDN20P56880 RSL24D1P1-201ENST00000404972 493 ntBASIC4.99□□□□□ -1.61
CLDN20P56880 RN7SKP229-201ENST00000410465 302 ntBASIC4.99□□□□□ -1.61
CLDN20P56880 RPSAP35-201ENST00000413753 818 ntBASIC4.99□□□□□ -1.61
CLDN20P56880 AL158050.1-201ENST00000416077 457 ntBASIC4.99□□□□□ -1.61
CLDN20P56880 RNF10P1-201ENST00000418589 369 ntBASIC4.99□□□□□ -1.61
CLDN20P56880 VN1R37P-201ENST00000419096 748 ntBASIC4.99□□□□□ -1.61
CLDN20P56880 AC006065.1-201ENST00000422539 802 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms