Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 TCEA1P3-201ENST00000443005 880 ntBASIC5.18□□□□□ -1.58
HTTP42858 AC016772.1-201ENST00000444170 1261 ntBASIC5.18□□□□□ -1.58
HTTP42858 RPS7P7-201ENST00000463499 571 ntBASIC5.18□□□□□ -1.58
HTTP42858 RNU6-709P-201ENST00000517257 104 ntBASIC5.18□□□□□ -1.58
HTTP42858 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.18□□□□□ -1.58
HTTP42858 AC005858.4-201ENST00000623191 700 ntBASIC5.18□□□□□ -1.58
HTTP42858 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HTTP42858 GON4L-218ENST00000620426 5506 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HTTP42858 AC135352.1-201ENST00000506173 1418 ntBASIC5.18□□□□□ -1.58
HTTP42858 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HTTP42858 ERG-202ENST00000398897 4651 ntTSL 5 BASIC5.18□□□□□ -1.58
HTTP42858 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
HTTP42858 ABCA4-201ENST00000370225 7309 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HTTP42858 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HTTP42858 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
HTTP42858 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HTTP42858 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC5.17□□□□□ -1.58
HTTP42858 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HTTP42858 NDUFB4P4-201ENST00000404822 243 ntBASIC5.17□□□□□ -1.58
HTTP42858 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.17□□□□□ -1.58
HTTP42858 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.17□□□□□ -1.58
HTTP42858 AC022336.1-201ENST00000475510 337 ntBASIC5.17□□□□□ -1.58
HTTP42858 VN1R105P-201ENST00000486595 910 ntBASIC5.17□□□□□ -1.58
HTTP42858 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.17□□□□□ -1.58
HTTP42858 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.17□□□□□ -1.58
HTTP42858 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.17□□□□□ -1.58
HTTP42858 SMG1P6-201ENST00000532337 2930 ntBASIC5.17□□□□□ -1.58
HTTP42858 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC5.17□□□□□ -1.58
HTTP42858 EIF2AP4-201ENST00000424793 1781 ntBASIC5.17□□□□□ -1.58
HTTP42858 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HTTP42858 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HTTP42858 AC090018.1-201ENST00000434369 367 ntBASIC5.17□□□□□ -1.58
HTTP42858 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.17□□□□□ -1.58
HTTP42858 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC5.17□□□□□ -1.58
HTTP42858 OR5D2P-201ENST00000524390 911 ntBASIC5.17□□□□□ -1.58
HTTP42858 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.17□□□□□ -1.58
HTTP42858 AC087499.8-201ENST00000578406 226 ntBASIC5.17□□□□□ -1.58
HTTP42858 AC140479.6-201ENST00000633535 357 ntBASIC5.17□□□□□ -1.58
HTTP42858 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HTTP42858 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
HTTP42858 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HTTP42858 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HTTP42858 TAF1L-201ENST00000242310 6216 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
HTTP42858 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.17□□□□□ -1.58
HTTP42858 MALAT1-202ENST00000534336 8708 ntBASIC5.17□□□□□ -1.58
HTTP42858 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC5.17□□□□□ -1.58
HTTP42858 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HTTP42858 NCKAP5-201ENST00000317721 7593 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
HTTP42858 NCKAP5-205ENST00000409261 7594 ntAPPRIS P4 TSL 5 BASIC5.17□□□□□ -1.58
HTTP42858 DSC3-202ENST00000434452 6978 ntTSL 5 BASIC5.17□□□□□ -1.58
HTTP42858 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.17□□□□□ -1.58
HTTP42858 DOCK8-205ENST00000453981 7237 ntTSL 5 BASIC5.17□□□□□ -1.58
HTTP42858 RN7SL517P-201ENST00000462240 305 ntBASIC5.17□□□□□ -1.58
HTTP42858 AC023632.4-201ENST00000517783 191 ntBASIC5.17□□□□□ -1.58
HTTP42858 FRMPD4-202ENST00000616992 7916 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
HTTP42858 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC5.16□□□□□ -1.58
HTTP42858 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HTTP42858 TLN2-211ENST00000636159 7441 ntTSL 5 BASIC5.16□□□□□ -1.58
HTTP42858 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
HTTP42858 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HTTP42858 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HTTP42858 AC245060.6-201ENST00000624350 8420 ntBASIC5.16□□□□□ -1.58
HTTP42858 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HTTP42858 OR1F12-201ENST00000402365 945 ntBASIC5.16□□□□□ -1.58
HTTP42858 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC5.16□□□□□ -1.58
HTTP42858 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC5.16□□□□□ -1.58
HTTP42858 BTF3P10-201ENST00000433415 495 ntBASIC5.16□□□□□ -1.58
HTTP42858 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.16□□□□□ -1.58
HTTP42858 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC5.16□□□□□ -1.58
HTTP42858 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC5.16□□□□□ -1.58
HTTP42858 MIR4286-201ENST00000580651 93 ntBASIC5.16□□□□□ -1.58
HTTP42858 MIR6875-201ENST00000617506 72 ntBASIC5.16□□□□□ -1.58
HTTP42858 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.16□□□□□ -1.58
HTTP42858 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.16□□□□□ -1.58
HTTP42858 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
HTTP42858 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.16□□□□□ -1.58
HTTP42858 DNAH11-201ENST00000328843 13917 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
HTTP42858 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HTTP42858 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.16□□□□□ -1.58
HTTP42858 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.16□□□□□ -1.58
HTTP42858 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
HTTP42858 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HTTP42858 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
HTTP42858 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
HTTP42858 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.16□□□□□ -1.58
HTTP42858 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HTTP42858 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.16□□□□□ -1.58
HTTP42858 PTMAP2-201ENST00000397627 327 ntBASIC5.16□□□□□ -1.58
HTTP42858 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.16□□□□□ -1.58
HTTP42858 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC5.16□□□□□ -1.58
HTTP42858 AC116553.2-201ENST00000564203 463 ntBASIC5.16□□□□□ -1.58
HTTP42858 AC022884.2-201ENST00000578535 580 ntBASIC5.16□□□□□ -1.58
HTTP42858 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.16□□□□□ -1.58
HTTP42858 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
HTTP42858 BCOR-203ENST00000378455 6338 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
HTTP42858 DGKK-201ENST00000611977 7407 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HTTP42858 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
HTTP42858 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
HTTP42858 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.58
HTTP42858 GABRA4-201ENST00000264318 11973 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms