Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
LTBRP36941 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
LTBRP36941 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
LTBRP36941 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.28□□□□□ -1.4
LTBRP36941 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
LTBRP36941 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LTBRP36941 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
LTBRP36941 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
LTBRP36941 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC6.27□□□□□ -1.4
LTBRP36941 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.4
LTBRP36941 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.4
LTBRP36941 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
LTBRP36941 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
LTBRP36941 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
LTBRP36941 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
LTBRP36941 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
LTBRP36941 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
LTBRP36941 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
LTBRP36941 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC6.27□□□□□ -1.41
LTBRP36941 AC011503.2-201ENST00000594230 1500 ntBASIC6.27□□□□□ -1.41
LTBRP36941 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
LTBRP36941 NACA-203ENST00000454682 6629 ntTSL 5 BASIC6.27□□□□□ -1.41
LTBRP36941 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
LTBRP36941 RNU6-707P-201ENST00000364647 95 ntBASIC6.27□□□□□ -1.41
LTBRP36941 MIR525-201ENST00000384978 85 ntBASIC6.27□□□□□ -1.41
LTBRP36941 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
LTBRP36941 AL031577.2-201ENST00000404133 280 ntBASIC6.27□□□□□ -1.41
LTBRP36941 AL713922.1-201ENST00000416477 747 ntBASIC6.27□□□□□ -1.41
LTBRP36941 TRBV24OR9-2-201ENST00000416632 435 ntBASIC6.27□□□□□ -1.41
LTBRP36941 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
LTBRP36941 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.27□□□□□ -1.41
LTBRP36941 GTF2IP23-201ENST00000423746 351 ntBASIC6.27□□□□□ -1.41
LTBRP36941 AC009784.1-201ENST00000426484 460 ntBASIC6.27□□□□□ -1.41
LTBRP36941 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC6.27□□□□□ -1.41
LTBRP36941 MTCO1P3-201ENST00000429327 192 ntBASIC6.27□□□□□ -1.41
LTBRP36941 AC124944.2-201ENST00000429866 1242 ntBASIC6.27□□□□□ -1.41
LTBRP36941 FTH1P10-202ENST00000430907 550 ntBASIC6.27□□□□□ -1.41
LTBRP36941 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.27□□□□□ -1.41
LTBRP36941 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC6.27□□□□□ -1.41
LTBRP36941 AL929288.2-201ENST00000446368 407 ntBASIC6.27□□□□□ -1.41
LTBRP36941 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.27□□□□□ -1.41
LTBRP36941 TPMTP4-201ENST00000450749 678 ntBASIC6.27□□□□□ -1.41
LTBRP36941 AC091685.2-201ENST00000454924 864 ntBASIC6.27□□□□□ -1.41
LTBRP36941 RANP1-206ENST00000455094 651 ntBASIC6.27□□□□□ -1.41
LTBRP36941 AC021074.2-201ENST00000468434 172 ntBASIC6.27□□□□□ -1.41
LTBRP36941 RPS17P15-201ENST00000475609 349 ntBASIC6.27□□□□□ -1.41
LTBRP36941 AC004453.1-201ENST00000487895 408 ntBASIC6.27□□□□□ -1.41
LTBRP36941 PRELID3BP7-201ENST00000503606 469 ntBASIC6.27□□□□□ -1.41
LTBRP36941 AC011352.1-201ENST00000512300 793 ntBASIC6.27□□□□□ -1.41
LTBRP36941 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC6.27□□□□□ -1.41
LTBRP36941 RNU6-615P-201ENST00000516065 106 ntBASIC6.27□□□□□ -1.41
LTBRP36941 MTND1P5-201ENST00000517906 940 ntBASIC6.27□□□□□ -1.41
LTBRP36941 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC6.27□□□□□ -1.41
LTBRP36941 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.27□□□□□ -1.41
LTBRP36941 AC105185.1-201ENST00000518705 535 ntBASIC6.27□□□□□ -1.41
LTBRP36941 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC6.27□□□□□ -1.41
LTBRP36941 AC092747.2-201ENST00000545069 983 ntBASIC6.27□□□□□ -1.41
LTBRP36941 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC6.27□□□□□ -1.41
LTBRP36941 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC6.27□□□□□ -1.41
LTBRP36941 BLZF2P-201ENST00000553776 1130 ntBASIC6.27□□□□□ -1.41
LTBRP36941 AGGF1P7-201ENST00000562369 913 ntBASIC6.27□□□□□ -1.41
LTBRP36941 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.27□□□□□ -1.41
LTBRP36941 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC6.27□□□□□ -1.41
LTBRP36941 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
LTBRP36941 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC6.27□□□□□ -1.41
LTBRP36941 BNIP3P26-201ENST00000600827 554 ntBASIC6.27□□□□□ -1.41
LTBRP36941 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.27□□□□□ -1.41
LTBRP36941 AC008115.3-201ENST00000614874 549 ntBASIC6.27□□□□□ -1.41
LTBRP36941 PDCD6IPP1-202ENST00000622242 1064 ntBASIC6.27□□□□□ -1.41
LTBRP36941 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC6.27□□□□□ -1.41
LTBRP36941 AF001550.2-201ENST00000636643 217 ntBASIC6.27□□□□□ -1.41
LTBRP36941 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
LTBRP36941 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
LTBRP36941 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
LTBRP36941 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
LTBRP36941 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC6.27□□□□□ -1.41
LTBRP36941 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
LTBRP36941 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
LTBRP36941 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC6.27□□□□□ -1.41
LTBRP36941 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
LTBRP36941 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
LTBRP36941 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
LTBRP36941 AC092725.2-201ENST00000567658 1389 ntBASIC6.27□□□□□ -1.41
LTBRP36941 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
LTBRP36941 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
LTBRP36941 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
LTBRP36941 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
LTBRP36941 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC6.27□□□□□ -1.41
LTBRP36941 UG0898H09-202ENST00000623646 7040 ntBASIC6.27□□□□□ -1.41
LTBRP36941 AL592429.1-201ENST00000403909 1473 ntBASIC6.27□□□□□ -1.41
LTBRP36941 OSBPL9P1-201ENST00000604744 1469 ntBASIC6.27□□□□□ -1.41
LTBRP36941 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
LTBRP36941 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.27□□□□□ -1.41
LTBRP36941 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
LTBRP36941 PARP4P2-201ENST00000446672 3326 ntBASIC6.27□□□□□ -1.41
LTBRP36941 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
LTBRP36941 CASC19-281ENST00000642118 1554 ntBASIC6.27□□□□□ -1.41
LTBRP36941 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC6.27□□□□□ -1.41
LTBRP36941 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
LTBRP36941 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms