Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 AC015982.1-201ENST00000608113 465 ntBASIC5.84□□□□□ -1.47
KRT9P35527 AL645927.2-201ENST00000618350 349 ntBASIC5.84□□□□□ -1.47
KRT9P35527 MIR6839-201ENST00000620425 113 ntBASIC5.84□□□□□ -1.47
KRT9P35527 AP006248.3-201ENST00000623580 594 ntBASIC5.84□□□□□ -1.47
KRT9P35527 CFTRP2-201ENST00000634304 199 ntBASIC5.84□□□□□ -1.47
KRT9P35527 SAMMSON-209ENST00000641222 1100 ntBASIC5.84□□□□□ -1.47
KRT9P35527 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
KRT9P35527 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
KRT9P35527 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
KRT9P35527 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
KRT9P35527 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.84□□□□□ -1.47
KRT9P35527 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.84□□□□□ -1.47
KRT9P35527 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.84□□□□□ -1.47
KRT9P35527 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
KRT9P35527 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.48
KRT9P35527 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
KRT9P35527 AP001002.1-201ENST00000625148 1513 ntBASIC5.84□□□□□ -1.48
KRT9P35527 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.84□□□□□ -1.48
KRT9P35527 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
KRT9P35527 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.83□□□□□ -1.48
KRT9P35527 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
KRT9P35527 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
KRT9P35527 CASC19-284ENST00000642142 1868 ntBASIC5.83□□□□□ -1.48
KRT9P35527 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
KRT9P35527 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.83□□□□□ -1.48
KRT9P35527 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
KRT9P35527 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
KRT9P35527 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.83□□□□□ -1.48
KRT9P35527 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.83□□□□□ -1.48
KRT9P35527 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
KRT9P35527 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
KRT9P35527 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
KRT9P35527 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
KRT9P35527 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
KRT9P35527 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.83□□□□□ -1.48
KRT9P35527 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
KRT9P35527 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.83□□□□□ -1.48
KRT9P35527 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.83□□□□□ -1.48
KRT9P35527 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.83□□□□□ -1.48
KRT9P35527 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.83□□□□□ -1.48
KRT9P35527 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC5.83□□□□□ -1.48
KRT9P35527 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.83□□□□□ -1.48
KRT9P35527 AC019185.1-201ENST00000442718 389 ntBASIC5.83□□□□□ -1.48
KRT9P35527 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.83□□□□□ -1.48
KRT9P35527 HMGN1P36-201ENST00000446623 298 ntBASIC5.83□□□□□ -1.48
KRT9P35527 YWHAEP1-201ENST00000453697 763 ntBASIC5.83□□□□□ -1.48
KRT9P35527 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.83□□□□□ -1.48
KRT9P35527 AC116562.1-201ENST00000485355 781 ntBASIC5.83□□□□□ -1.48
KRT9P35527 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.83□□□□□ -1.48
KRT9P35527 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.83□□□□□ -1.48
KRT9P35527 MTND6P2-201ENST00000512226 524 ntBASIC5.83□□□□□ -1.48
KRT9P35527 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.83□□□□□ -1.48
KRT9P35527 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.83□□□□□ -1.48
KRT9P35527 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.83□□□□□ -1.48
KRT9P35527 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.83□□□□□ -1.48
KRT9P35527 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.83□□□□□ -1.48
KRT9P35527 RN7SL356P-201ENST00000582228 248 ntBASIC5.83□□□□□ -1.48
KRT9P35527 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.83□□□□□ -1.48
KRT9P35527 AC009027.1-201ENST00000604510 479 ntBASIC5.83□□□□□ -1.48
KRT9P35527 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.83□□□□□ -1.48
KRT9P35527 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.83□□□□□ -1.48
KRT9P35527 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.83□□□□□ -1.48
KRT9P35527 RN7SL787P-201ENST00000613000 284 ntBASIC5.83□□□□□ -1.48
KRT9P35527 AC109583.2-201ENST00000617367 129 ntBASIC5.83□□□□□ -1.48
KRT9P35527 AC127024.6-201ENST00000621598 424 ntBASIC5.83□□□□□ -1.48
KRT9P35527 AC132068.1-201ENST00000623805 459 ntBASIC5.83□□□□□ -1.48
KRT9P35527 AP001962.1-201ENST00000624114 559 ntBASIC5.83□□□□□ -1.48
KRT9P35527 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.83□□□□□ -1.48
KRT9P35527 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
KRT9P35527 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.83□□□□□ -1.48
KRT9P35527 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
KRT9P35527 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.83□□□□□ -1.48
KRT9P35527 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.83□□□□□ -1.48
KRT9P35527 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
KRT9P35527 AC093849.1-201ENST00000563631 2209 ntBASIC5.83□□□□□ -1.48
KRT9P35527 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
KRT9P35527 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.83□□□□□ -1.48
KRT9P35527 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.83□□□□□ -1.48
KRT9P35527 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
KRT9P35527 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
KRT9P35527 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.83□□□□□ -1.48
KRT9P35527 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.82□□□□□ -1.48
KRT9P35527 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
KRT9P35527 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.82□□□□□ -1.48
KRT9P35527 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
KRT9P35527 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.82□□□□□ -1.48
KRT9P35527 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
KRT9P35527 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
KRT9P35527 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
KRT9P35527 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
KRT9P35527 TMSB4XP4-201ENST00000323496 618 ntBASIC5.82□□□□□ -1.48
KRT9P35527 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.82□□□□□ -1.48
KRT9P35527 Y_RNA.110-201ENST00000363220 99 ntBASIC5.82□□□□□ -1.48
KRT9P35527 SNORA16A-201ENST00000384342 137 ntBASIC5.82□□□□□ -1.48
KRT9P35527 RNU6-244P-201ENST00000391028 104 ntBASIC5.82□□□□□ -1.48
KRT9P35527 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
KRT9P35527 Z93019.1-201ENST00000416450 973 ntBASIC5.82□□□□□ -1.48
KRT9P35527 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.82□□□□□ -1.48
KRT9P35527 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.82□□□□□ -1.48
KRT9P35527 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms