Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC009220.3-201ENST00000604318 586 ntBASIC7.36□□□□□ -1.23
ERCC3P19447 AC010738.1-201ENST00000604970 987 ntBASIC7.36□□□□□ -1.23
ERCC3P19447 SNORA74.4-201ENST00000607595 199 ntBASIC7.36□□□□□ -1.23
ERCC3P19447 AC092266.1-201ENST00000610958 165 ntBASIC7.36□□□□□ -1.23
ERCC3P19447 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC7.36□□□□□ -1.23
ERCC3P19447 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC7.36□□□□□ -1.23
ERCC3P19447 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC7.36□□□□□ -1.23
ERCC3P19447 OR7E91P-202ENST00000642062 1198 ntBASIC7.36□□□□□ -1.23
ERCC3P19447 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC7.36□□□□□ -1.23
ERCC3P19447 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC7.36□□□□□ -1.23
ERCC3P19447 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC7.36□□□□□ -1.23
ERCC3P19447 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
ERCC3P19447 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
ERCC3P19447 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC7.36□□□□□ -1.23
ERCC3P19447 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
ERCC3P19447 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
ERCC3P19447 AC087359.1-201ENST00000508335 1740 ntBASIC7.35□□□□□ -1.23
ERCC3P19447 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC7.35□□□□□ -1.23
ERCC3P19447 AC007485.2-201ENST00000623493 1667 ntBASIC7.35□□□□□ -1.23
ERCC3P19447 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC7.35□□□□□ -1.23
ERCC3P19447 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
ERCC3P19447 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
ERCC3P19447 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC7.35□□□□□ -1.23
ERCC3P19447 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC7.35□□□□□ -1.23
ERCC3P19447 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
ERCC3P19447 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC7.35□□□□□ -1.23
ERCC3P19447 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
ERCC3P19447 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
ERCC3P19447 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
ERCC3P19447 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
ERCC3P19447 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
ERCC3P19447 AC048351.1-201ENST00000420064 602 ntBASIC7.35□□□□□ -1.23
ERCC3P19447 AL157884.1-201ENST00000424561 454 ntBASIC7.35□□□□□ -1.23
ERCC3P19447 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC7.35□□□□□ -1.23
ERCC3P19447 RPL23AP19-201ENST00000436229 369 ntBASIC7.35□□□□□ -1.23
ERCC3P19447 CBX1P4-201ENST00000439415 457 ntBASIC7.35□□□□□ -1.23
ERCC3P19447 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC7.35□□□□□ -1.23
ERCC3P19447 AC092809.1-201ENST00000441469 474 ntBASIC7.35□□□□□ -1.23
ERCC3P19447 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC7.35□□□□□ -1.23
ERCC3P19447 MTCO2P25-201ENST00000447065 681 ntBASIC7.35□□□□□ -1.23
ERCC3P19447 RN7SL369P-201ENST00000477138 299 ntBASIC7.35□□□□□ -1.23
ERCC3P19447 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC7.35□□□□□ -1.23
ERCC3P19447 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC7.35□□□□□ -1.23
ERCC3P19447 AC073358.1-201ENST00000505671 684 ntBASIC7.35□□□□□ -1.23
ERCC3P19447 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC7.35□□□□□ -1.23
ERCC3P19447 KHDC1P1-201ENST00000511053 508 ntBASIC7.35□□□□□ -1.23
ERCC3P19447 AC109471.1-201ENST00000511631 612 ntBASIC7.35□□□□□ -1.23
ERCC3P19447 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC7.35□□□□□ -1.23
ERCC3P19447 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC7.35□□□□□ -1.23
ERCC3P19447 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC7.35□□□□□ -1.23
ERCC3P19447 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC7.35□□□□□ -1.23
ERCC3P19447 AP002373.2-201ENST00000541631 1060 ntBASIC7.35□□□□□ -1.23
ERCC3P19447 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC7.35□□□□□ -1.23
ERCC3P19447 AC084824.1-201ENST00000550917 1005 ntBASIC7.35□□□□□ -1.23
ERCC3P19447 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC7.35□□□□□ -1.23
ERCC3P19447 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
ERCC3P19447 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC7.35□□□□□ -1.23
ERCC3P19447 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC7.35□□□□□ -1.23
ERCC3P19447 AC012435.1-202ENST00000568772 240 ntBASIC7.35□□□□□ -1.23
ERCC3P19447 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC7.35□□□□□ -1.23
ERCC3P19447 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC7.35□□□□□ -1.23
ERCC3P19447 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC7.35□□□□□ -1.23
ERCC3P19447 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC7.35□□□□□ -1.23
ERCC3P19447 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC7.35□□□□□ -1.23
ERCC3P19447 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC7.35□□□□□ -1.23
ERCC3P19447 HULC.1-201ENST00000612720 240 ntBASIC7.35□□□□□ -1.23
ERCC3P19447 AL138960.1-201ENST00000613838 513 ntBASIC7.35□□□□□ -1.23
ERCC3P19447 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
ERCC3P19447 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC7.35□□□□□ -1.23
ERCC3P19447 OR1N1-202ENST00000619659 939 ntBASIC7.35□□□□□ -1.23
ERCC3P19447 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
ERCC3P19447 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC7.35□□□□□ -1.23
ERCC3P19447 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
ERCC3P19447 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC7.35□□□□□ -1.23
ERCC3P19447 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC7.35□□□□□ -1.23
ERCC3P19447 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
ERCC3P19447 CREM-217ENST00000439705 2306 ntTSL 5 BASIC7.35□□□□□ -1.23
ERCC3P19447 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
ERCC3P19447 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
ERCC3P19447 CASC19-228ENST00000641414 1684 ntBASIC7.35□□□□□ -1.23
ERCC3P19447 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
ERCC3P19447 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
ERCC3P19447 AC022905.1-201ENST00000503430 3048 ntBASIC7.34□□□□□ -1.23
ERCC3P19447 SLC9B1P1-201ENST00000331172 1337 ntBASIC7.34□□□□□ -1.23
ERCC3P19447 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC7.34□□□□□ -1.23
ERCC3P19447 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
ERCC3P19447 OR56B2P-201ENST00000317102 954 ntBASIC7.34□□□□□ -1.23
ERCC3P19447 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
ERCC3P19447 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
ERCC3P19447 SNORD16-201ENST00000362803 99 ntBASIC7.34□□□□□ -1.23
ERCC3P19447 RNU6-553P-201ENST00000364047 96 ntBASIC7.34□□□□□ -1.23
ERCC3P19447 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC7.34□□□□□ -1.23
ERCC3P19447 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
ERCC3P19447 AC005522.1-201ENST00000395416 346 ntBASIC7.34□□□□□ -1.23
ERCC3P19447 TMSB4XP8-201ENST00000402089 135 ntBASIC7.34□□□□□ -1.23
ERCC3P19447 MOB4-205ENST00000409916 829 ntTSL 3 BASIC7.34□□□□□ -1.23
ERCC3P19447 AL161449.1-201ENST00000414531 1199 ntBASIC7.34□□□□□ -1.23
ERCC3P19447 TMSB4XP6-201ENST00000415187 135 ntBASIC7.34□□□□□ -1.23
ERCC3P19447 AC066692.1-201ENST00000421721 457 ntBASIC7.34□□□□□ -1.23
ERCC3P19447 TMSB4XP1-201ENST00000424567 135 ntBASIC7.34□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms