Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 COX6B1P2-201ENST00000489624 230 ntBASIC5.38□□□□□ -1.55
KRT3P12035 AC005412.2-201ENST00000492004 341 ntBASIC5.38□□□□□ -1.55
KRT3P12035 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.38□□□□□ -1.55
KRT3P12035 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.38□□□□□ -1.55
KRT3P12035 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.38□□□□□ -1.55
KRT3P12035 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.38□□□□□ -1.55
KRT3P12035 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.38□□□□□ -1.55
KRT3P12035 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.38□□□□□ -1.55
KRT3P12035 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
KRT3P12035 AC004825.1-201ENST00000555068 586 ntBASIC5.38□□□□□ -1.55
KRT3P12035 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.38□□□□□ -1.55
KRT3P12035 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
KRT3P12035 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.38□□□□□ -1.55
KRT3P12035 AP005432.2-201ENST00000608162 586 ntBASIC5.38□□□□□ -1.55
KRT3P12035 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.38□□□□□ -1.55
KRT3P12035 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.38□□□□□ -1.55
KRT3P12035 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.38□□□□□ -1.55
KRT3P12035 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
KRT3P12035 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
KRT3P12035 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
KRT3P12035 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.38□□□□□ -1.55
KRT3P12035 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.38□□□□□ -1.55
KRT3P12035 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.37□□□□□ -1.55
KRT3P12035 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
KRT3P12035 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
KRT3P12035 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.37□□□□□ -1.55
KRT3P12035 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.37□□□□□ -1.55
KRT3P12035 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.37□□□□□ -1.55
KRT3P12035 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
KRT3P12035 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.37□□□□□ -1.55
KRT3P12035 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
KRT3P12035 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
KRT3P12035 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.37□□□□□ -1.55
KRT3P12035 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
KRT3P12035 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
KRT3P12035 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
KRT3P12035 SNORA2.3-201ENST00000383920 135 ntBASIC5.37□□□□□ -1.55
KRT3P12035 U3.32-201ENST00000408116 212 ntBASIC5.37□□□□□ -1.55
KRT3P12035 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.37□□□□□ -1.55
KRT3P12035 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.37□□□□□ -1.55
KRT3P12035 HSPE1P16-201ENST00000426640 348 ntBASIC5.37□□□□□ -1.55
KRT3P12035 AL139148.1-201ENST00000427122 680 ntBASIC5.37□□□□□ -1.55
KRT3P12035 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.37□□□□□ -1.55
KRT3P12035 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.37□□□□□ -1.55
KRT3P12035 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC5.37□□□□□ -1.55
KRT3P12035 AC004980.3-201ENST00000447046 365 ntBASIC5.37□□□□□ -1.55
KRT3P12035 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
KRT3P12035 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.37□□□□□ -1.55
KRT3P12035 RN7SL172P-201ENST00000460535 303 ntBASIC5.37□□□□□ -1.55
KRT3P12035 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.37□□□□□ -1.55
KRT3P12035 COPS8P2-201ENST00000473228 627 ntBASIC5.37□□□□□ -1.55
KRT3P12035 RPL5P22-201ENST00000480199 884 ntBASIC5.37□□□□□ -1.55
KRT3P12035 AC072052.1-201ENST00000496556 306 ntBASIC5.37□□□□□ -1.55
KRT3P12035 ENPP7P11-201ENST00000505915 627 ntBASIC5.37□□□□□ -1.55
KRT3P12035 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC5.37□□□□□ -1.55
KRT3P12035 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.37□□□□□ -1.55
KRT3P12035 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.37□□□□□ -1.55
KRT3P12035 OR8A2P-201ENST00000528631 952 ntBASIC5.37□□□□□ -1.55
KRT3P12035 AL390334.1-201ENST00000556395 450 ntBASIC5.37□□□□□ -1.55
KRT3P12035 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.37□□□□□ -1.55
KRT3P12035 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.37□□□□□ -1.55
KRT3P12035 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.37□□□□□ -1.55
KRT3P12035 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.37□□□□□ -1.55
KRT3P12035 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.37□□□□□ -1.55
KRT3P12035 AC099494.2-201ENST00000623371 978 ntBASIC5.37□□□□□ -1.55
KRT3P12035 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.37□□□□□ -1.55
KRT3P12035 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC5.37□□□□□ -1.55
KRT3P12035 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.37□□□□□ -1.55
KRT3P12035 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.37□□□□□ -1.55
KRT3P12035 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
KRT3P12035 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.37□□□□□ -1.55
KRT3P12035 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
KRT3P12035 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
KRT3P12035 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.37□□□□□ -1.55
KRT3P12035 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.37□□□□□ -1.55
KRT3P12035 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.37□□□□□ -1.55
KRT3P12035 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
KRT3P12035 AC114947.2-201ENST00000565748 2125 ntBASIC5.36□□□□□ -1.55
KRT3P12035 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
KRT3P12035 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
KRT3P12035 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
KRT3P12035 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.36□□□□□ -1.55
KRT3P12035 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
KRT3P12035 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
KRT3P12035 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
KRT3P12035 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.36□□□□□ -1.55
KRT3P12035 MIR223-201ENST00000385204 110 ntBASIC5.36□□□□□ -1.55
KRT3P12035 RN7SKP16-201ENST00000410180 299 ntBASIC5.36□□□□□ -1.55
KRT3P12035 AP000534.2-201ENST00000412729 568 ntBASIC5.36□□□□□ -1.55
KRT3P12035 AC244453.4-201ENST00000419150 388 ntBASIC5.36□□□□□ -1.55
KRT3P12035 ARAFP1-201ENST00000422172 605 ntBASIC5.36□□□□□ -1.55
KRT3P12035 NANOGP4-201ENST00000427230 913 ntBASIC5.36□□□□□ -1.55
KRT3P12035 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.36□□□□□ -1.55
KRT3P12035 FAR2P1-206ENST00000449736 709 ntBASIC5.36□□□□□ -1.55
KRT3P12035 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.36□□□□□ -1.55
KRT3P12035 AL389915.2-201ENST00000454576 441 ntBASIC5.36□□□□□ -1.55
KRT3P12035 RN7SL30P-201ENST00000488416 306 ntBASIC5.36□□□□□ -1.55
KRT3P12035 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.36□□□□□ -1.55
KRT3P12035 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
KRT3P12035 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms