Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.18□□□□□ -1.58
LINGO3P0C6S8 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LINGO3P0C6S8 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.18□□□□□ -1.58
LINGO3P0C6S8 LINC01109-201ENST00000603837 3081 ntBASIC5.18□□□□□ -1.58
LINGO3P0C6S8 AC110792.3-201ENST00000595906 1614 ntBASIC5.18□□□□□ -1.58
LINGO3P0C6S8 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LINGO3P0C6S8 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.18□□□□□ -1.58
LINGO3P0C6S8 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.18□□□□□ -1.58
LINGO3P0C6S8 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.17□□□□□ -1.58
LINGO3P0C6S8 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.17□□□□□ -1.58
LINGO3P0C6S8 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
LINGO3P0C6S8 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.17□□□□□ -1.58
LINGO3P0C6S8 RLIMP2-201ENST00000427891 1563 ntBASIC5.17□□□□□ -1.58
LINGO3P0C6S8 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.17□□□□□ -1.58
LINGO3P0C6S8 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LINGO3P0C6S8 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LINGO3P0C6S8 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LINGO3P0C6S8 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.17□□□□□ -1.58
LINGO3P0C6S8 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LINGO3P0C6S8 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.17□□□□□ -1.58
LINGO3P0C6S8 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LINGO3P0C6S8 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LINGO3P0C6S8 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.17□□□□□ -1.58
LINGO3P0C6S8 SNORA64.1-201ENST00000362600 132 ntBASIC5.17□□□□□ -1.58
LINGO3P0C6S8 RNA5SP394-201ENST00000364216 119 ntBASIC5.17□□□□□ -1.58
LINGO3P0C6S8 RNA5SP30-201ENST00000365552 115 ntBASIC5.17□□□□□ -1.58
LINGO3P0C6S8 RNU6-31P-201ENST00000384388 108 ntBASIC5.17□□□□□ -1.58
LINGO3P0C6S8 RNA5SP284-201ENST00000384547 118 ntBASIC5.17□□□□□ -1.58
LINGO3P0C6S8 HMGB1P20-201ENST00000402555 677 ntBASIC5.17□□□□□ -1.58
LINGO3P0C6S8 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
LINGO3P0C6S8 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.17□□□□□ -1.58
LINGO3P0C6S8 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.17□□□□□ -1.58
LINGO3P0C6S8 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.17□□□□□ -1.58
LINGO3P0C6S8 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.17□□□□□ -1.58
LINGO3P0C6S8 RPA2P2-201ENST00000419698 796 ntBASIC5.17□□□□□ -1.58
LINGO3P0C6S8 AC093155.2-201ENST00000420734 937 ntBASIC5.17□□□□□ -1.58
LINGO3P0C6S8 RPL17P35-201ENST00000432217 549 ntBASIC5.17□□□□□ -1.58
LINGO3P0C6S8 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.17□□□□□ -1.58
LINGO3P0C6S8 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.17□□□□□ -1.58
LINGO3P0C6S8 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.17□□□□□ -1.58
LINGO3P0C6S8 CYCSP24-201ENST00000445119 316 ntBASIC5.17□□□□□ -1.58
LINGO3P0C6S8 AL353718.1-201ENST00000451028 517 ntBASIC5.17□□□□□ -1.58
LINGO3P0C6S8 AL645937.3-201ENST00000453647 936 ntBASIC5.17□□□□□ -1.58
LINGO3P0C6S8 CABYRP1-201ENST00000465493 1045 ntBASIC5.17□□□□□ -1.58
LINGO3P0C6S8 PSAT1P4-201ENST00000466500 526 ntBASIC5.17□□□□□ -1.58
LINGO3P0C6S8 AC117394.1-201ENST00000477323 567 ntBASIC5.17□□□□□ -1.58
LINGO3P0C6S8 RPL21P6-201ENST00000479171 504 ntBASIC5.17□□□□□ -1.58
LINGO3P0C6S8 RN7SL447P-201ENST00000494711 245 ntBASIC5.17□□□□□ -1.58
LINGO3P0C6S8 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.17□□□□□ -1.58
LINGO3P0C6S8 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.17□□□□□ -1.58
LINGO3P0C6S8 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LINGO3P0C6S8 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.17□□□□□ -1.58
LINGO3P0C6S8 MRPS16P1-201ENST00000523462 412 ntBASIC5.17□□□□□ -1.58
LINGO3P0C6S8 PMS2P3-207ENST00000529061 717 ntBASIC5.17□□□□□ -1.58
LINGO3P0C6S8 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
LINGO3P0C6S8 TRIM51DP-201ENST00000529746 596 ntBASIC5.17□□□□□ -1.58
LINGO3P0C6S8 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.17□□□□□ -1.58
LINGO3P0C6S8 AL358913.1-201ENST00000554342 121 ntBASIC5.17□□□□□ -1.58
LINGO3P0C6S8 HSPE1P2-201ENST00000554777 306 ntBASIC5.17□□□□□ -1.58
LINGO3P0C6S8 AC027176.2-201ENST00000559166 746 ntBASIC5.17□□□□□ -1.58
LINGO3P0C6S8 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.17□□□□□ -1.58
LINGO3P0C6S8 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.17□□□□□ -1.58
LINGO3P0C6S8 AL356274.1-201ENST00000617064 410 ntBASIC5.17□□□□□ -1.58
LINGO3P0C6S8 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.17□□□□□ -1.58
LINGO3P0C6S8 AL390318.1-201ENST00000624564 687 ntBASIC5.17□□□□□ -1.58
LINGO3P0C6S8 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.17□□□□□ -1.58
LINGO3P0C6S8 MIR193BHG-214ENST00000641765 509 ntBASIC5.17□□□□□ -1.58
LINGO3P0C6S8 AC132825.1-201ENST00000463573 2247 ntBASIC5.17□□□□□ -1.58
LINGO3P0C6S8 PWAR1-201ENST00000624188 2414 ntBASIC5.17□□□□□ -1.58
LINGO3P0C6S8 AC097461.1-201ENST00000568928 2821 ntBASIC5.17□□□□□ -1.58
LINGO3P0C6S8 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LINGO3P0C6S8 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LINGO3P0C6S8 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC5.17□□□□□ -1.58
LINGO3P0C6S8 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LINGO3P0C6S8 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LINGO3P0C6S8 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
LINGO3P0C6S8 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LINGO3P0C6S8 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LINGO3P0C6S8 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
LINGO3P0C6S8 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LINGO3P0C6S8 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
LINGO3P0C6S8 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
LINGO3P0C6S8 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LINGO3P0C6S8 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LINGO3P0C6S8 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LINGO3P0C6S8 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LINGO3P0C6S8 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LINGO3P0C6S8 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
LINGO3P0C6S8 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
LINGO3P0C6S8 RNA5SP510-201ENST00000364697 99 ntBASIC5.16□□□□□ -1.58
LINGO3P0C6S8 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LINGO3P0C6S8 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
LINGO3P0C6S8 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
LINGO3P0C6S8 RPL5P19-201ENST00000404228 893 ntBASIC5.16□□□□□ -1.58
LINGO3P0C6S8 AL136131.1-201ENST00000406079 803 ntBASIC5.16□□□□□ -1.58
LINGO3P0C6S8 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.16□□□□□ -1.58
LINGO3P0C6S8 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.16□□□□□ -1.58
LINGO3P0C6S8 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.16□□□□□ -1.58
LINGO3P0C6S8 RPS29P14-201ENST00000431518 171 ntBASIC5.16□□□□□ -1.58
LINGO3P0C6S8 NDUFA5P10-201ENST00000432147 357 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms