Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC4.49□□□□□ -1.69
HLA-DPB1P04440 TCP11X3P-202ENST00000514289 1254 ntBASIC4.49□□□□□ -1.69
HLA-DPB1P04440 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.49□□□□□ -1.69
HLA-DPB1P04440 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DPB1P04440 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.49□□□□□ -1.69
HLA-DPB1P04440 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DPB1P04440 AL049779.2-201ENST00000553847 315 ntBASIC4.49□□□□□ -1.69
HLA-DPB1P04440 WDR61-205ENST00000558459 884 ntTSL 3 BASIC4.49□□□□□ -1.69
HLA-DPB1P04440 AC007225.2-201ENST00000562529 256 ntBASIC4.49□□□□□ -1.69
HLA-DPB1P04440 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC4.49□□□□□ -1.69
HLA-DPB1P04440 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.49□□□□□ -1.69
HLA-DPB1P04440 IMMP1LP3-201ENST00000604197 224 ntBASIC4.49□□□□□ -1.69
HLA-DPB1P04440 AP005131.7-201ENST00000610087 611 ntBASIC4.49□□□□□ -1.69
HLA-DPB1P04440 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.49□□□□□ -1.69
HLA-DPB1P04440 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC4.49□□□□□ -1.69
HLA-DPB1P04440 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DPB1P04440 AC068446.1-201ENST00000556425 1549 ntBASIC4.49□□□□□ -1.69
HLA-DPB1P04440 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
HLA-DPB1P04440 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DPB1P04440 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.49□□□□□ -1.69
HLA-DPB1P04440 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DPB1P04440 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
HLA-DPB1P04440 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DPB1P04440 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DPB1P04440 DHX9P1-201ENST00000436565 3076 ntBASIC4.49□□□□□ -1.69
HLA-DPB1P04440 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.49□□□□□ -1.69
HLA-DPB1P04440 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.49□□□□□ -1.69
HLA-DPB1P04440 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DPB1P04440 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DPB1P04440 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DPB1P04440 AC083843.3-201ENST00000623679 2186 ntBASIC4.48□□□□□ -1.69
HLA-DPB1P04440 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.48□□□□□ -1.69
HLA-DPB1P04440 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
HLA-DPB1P04440 AC092435.4-201ENST00000623012 4159 ntBASIC4.48□□□□□ -1.69
HLA-DPB1P04440 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DPB1P04440 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.48□□□□□ -1.69
HLA-DPB1P04440 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DPB1P04440 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
HLA-DPB1P04440 SNORA2.3-201ENST00000383920 135 ntBASIC4.48□□□□□ -1.69
HLA-DPB1P04440 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
HLA-DPB1P04440 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
HLA-DPB1P04440 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.48□□□□□ -1.69
HLA-DPB1P04440 SLC35E1P1-201ENST00000419313 864 ntBASIC4.48□□□□□ -1.69
HLA-DPB1P04440 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.48□□□□□ -1.69
HLA-DPB1P04440 AC013268.2-201ENST00000420753 337 ntBASIC4.48□□□□□ -1.69
HLA-DPB1P04440 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC4.48□□□□□ -1.69
HLA-DPB1P04440 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.48□□□□□ -1.69
HLA-DPB1P04440 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.48□□□□□ -1.69
HLA-DPB1P04440 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.48□□□□□ -1.69
HLA-DPB1P04440 RHEBP2-201ENST00000450289 600 ntBASIC4.48□□□□□ -1.69
HLA-DPB1P04440 OR2AF1P-201ENST00000454899 889 ntBASIC4.48□□□□□ -1.69
HLA-DPB1P04440 AC020779.1-201ENST00000478757 796 ntBASIC4.48□□□□□ -1.69
HLA-DPB1P04440 RN7SL591P-201ENST00000496150 292 ntBASIC4.48□□□□□ -1.69
HLA-DPB1P04440 ARL4AP1-201ENST00000503220 705 ntBASIC4.48□□□□□ -1.69
HLA-DPB1P04440 AC024558.1-201ENST00000505008 528 ntBASIC4.48□□□□□ -1.69
HLA-DPB1P04440 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.48□□□□□ -1.69
HLA-DPB1P04440 AC016839.1-201ENST00000578162 867 ntBASIC4.48□□□□□ -1.69
HLA-DPB1P04440 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.48□□□□□ -1.69
HLA-DPB1P04440 MIR6886-201ENST00000619864 61 ntBASIC4.48□□□□□ -1.69
HLA-DPB1P04440 AP002505.2-201ENST00000623585 696 ntBASIC4.48□□□□□ -1.69
HLA-DPB1P04440 METTL15-211ENST00000634762 718 ntTSL 5 BASIC4.48□□□□□ -1.69
HLA-DPB1P04440 AC135068.12-201ENST00000637370 931 ntBASIC4.48□□□□□ -1.69
HLA-DPB1P04440 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
HLA-DPB1P04440 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.48□□□□□ -1.69
HLA-DPB1P04440 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC4.48□□□□□ -1.69
HLA-DPB1P04440 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
HLA-DPB1P04440 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DPB1P04440 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DPB1P04440 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.48□□□□□ -1.69
HLA-DPB1P04440 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.48□□□□□ -1.69
HLA-DPB1P04440 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DPB1P04440 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DPB1P04440 DDX18P5-201ENST00000534547 1306 ntBASIC4.47□□□□□ -1.69
HLA-DPB1P04440 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DPB1P04440 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DPB1P04440 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DPB1P04440 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.47□□□□□ -1.69
HLA-DPB1P04440 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.47□□□□□ -1.69
HLA-DPB1P04440 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DPB1P04440 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DPB1P04440 RN7SKP113-201ENST00000363891 295 ntBASIC4.47□□□□□ -1.69
HLA-DPB1P04440 RNU1-43P-201ENST00000365052 165 ntBASIC4.47□□□□□ -1.69
HLA-DPB1P04440 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DPB1P04440 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DPB1P04440 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.47□□□□□ -1.69
HLA-DPB1P04440 AL592291.1-201ENST00000403830 352 ntBASIC4.47□□□□□ -1.69
HLA-DPB1P04440 RN7SKP229-201ENST00000410465 302 ntBASIC4.47□□□□□ -1.69
HLA-DPB1P04440 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.47□□□□□ -1.69
HLA-DPB1P04440 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.47□□□□□ -1.69
HLA-DPB1P04440 AC093655.2-201ENST00000425735 631 ntBASIC4.47□□□□□ -1.69
HLA-DPB1P04440 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.47□□□□□ -1.69
HLA-DPB1P04440 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC4.47□□□□□ -1.69
HLA-DPB1P04440 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DPB1P04440 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
HLA-DPB1P04440 RPL7P6-201ENST00000480903 738 ntBASIC4.47□□□□□ -1.69
HLA-DPB1P04440 RPS4XP20-201ENST00000505751 772 ntBASIC4.47□□□□□ -1.69
HLA-DPB1P04440 AC011411.1-201ENST00000509592 876 ntBASIC4.47□□□□□ -1.69
HLA-DPB1P04440 ASNSP4-201ENST00000511103 447 ntBASIC4.47□□□□□ -1.69
HLA-DPB1P04440 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC4.47□□□□□ -1.69
HLA-DPB1P04440 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 154.8 ms