Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC2.12□□□□□ -2.07
USH2AO75445 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
USH2AO75445 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC2.12□□□□□ -2.07
USH2AO75445 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC2.12□□□□□ -2.07
USH2AO75445 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC2.12□□□□□ -2.07
USH2AO75445 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC2.12□□□□□ -2.07
USH2AO75445 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC2.12□□□□□ -2.07
USH2AO75445 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.12□□□□□ -2.07
USH2AO75445 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC2.12□□□□□ -2.07
USH2AO75445 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
USH2AO75445 PAPPA2-202ENST00000367662 9691 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
USH2AO75445 AC006058.1-201ENST00000568686 5067 ntBASIC2.11□□□□□ -2.07
USH2AO75445 USP45-204ENST00000369233 2514 ntTSL 5 BASIC2.11□□□□□ -2.07
USH2AO75445 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
USH2AO75445 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC2.11□□□□□ -2.07
USH2AO75445 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC2.11□□□□□ -2.07
USH2AO75445 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
USH2AO75445 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
USH2AO75445 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC2.11□□□□□ -2.07
USH2AO75445 RNU1-82P-201ENST00000390851 165 ntBASIC2.11□□□□□ -2.07
USH2AO75445 ATP5HP3-201ENST00000396994 486 ntBASIC2.11□□□□□ -2.07
USH2AO75445 U3.32-201ENST00000408116 212 ntBASIC2.11□□□□□ -2.07
USH2AO75445 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC2.11□□□□□ -2.07
USH2AO75445 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC2.11□□□□□ -2.07
USH2AO75445 FTH1P24-201ENST00000503502 462 ntBASIC2.11□□□□□ -2.07
USH2AO75445 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC2.11□□□□□ -2.07
USH2AO75445 OR2L1P-202ENST00000641567 1023 ntBASIC2.11□□□□□ -2.07
USH2AO75445 CACNA1C-220ENST00000399655 13433 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
USH2AO75445 AC025569.1-202ENST00000548687 5903 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
USH2AO75445 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
USH2AO75445 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
USH2AO75445 TEK-202ENST00000406359 3935 ntTSL 2 BASIC2.11□□□□□ -2.07
USH2AO75445 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC2.11□□□□□ -2.07
USH2AO75445 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
USH2AO75445 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
USH2AO75445 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
USH2AO75445 ZEB2-239ENST00000637045 9091 ntTSL 5 BASIC2.11□□□□□ -2.07
USH2AO75445 MAX-203ENST00000341653 330 ntTSL 2 BASIC2.11□□□□□ -2.07
USH2AO75445 RNU1-24P-201ENST00000364285 165 ntBASIC2.11□□□□□ -2.07
USH2AO75445 RN7SKP267-201ENST00000410381 285 ntBASIC2.11□□□□□ -2.07
USH2AO75445 SNRPFP1-201ENST00000414761 252 ntBASIC2.11□□□□□ -2.07
USH2AO75445 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC2.11□□□□□ -2.07
USH2AO75445 CYCSP43-201ENST00000438233 310 ntBASIC2.11□□□□□ -2.07
USH2AO75445 AC104849.1-201ENST00000462623 405 ntBASIC2.11□□□□□ -2.07
USH2AO75445 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
USH2AO75445 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC2.11□□□□□ -2.07
USH2AO75445 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC2.11□□□□□ -2.07
USH2AO75445 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
USH2AO75445 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC2.11□□□□□ -2.07
USH2AO75445 AP003730.1-201ENST00000524605 285 ntBASIC2.11□□□□□ -2.07
USH2AO75445 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC2.11□□□□□ -2.07
USH2AO75445 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
USH2AO75445 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC2.11□□□□□ -2.07
USH2AO75445 AL133243.1-201ENST00000614487 366 ntBASIC2.11□□□□□ -2.07
USH2AO75445 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
USH2AO75445 AC107068.1-201ENST00000563286 4218 ntBASIC2.11□□□□□ -2.07
USH2AO75445 OTOG-202ENST00000399391 8778 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
USH2AO75445 AC002525.1-201ENST00000624392 1622 ntBASIC2.11□□□□□ -2.07
USH2AO75445 AC099654.3-201ENST00000447087 1546 ntBASIC2.11□□□□□ -2.07
USH2AO75445 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC2.11□□□□□ -2.07
USH2AO75445 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC2.11□□□□□ -2.07
USH2AO75445 HSBP1-201ENST00000433866 8784 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
USH2AO75445 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC2.11□□□□□ -2.07
USH2AO75445 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC2.11□□□□□ -2.07
USH2AO75445 SPHKAP-202ENST00000392056 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
USH2AO75445 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC2.11□□□□□ -2.07
USH2AO75445 AL359195.2-201ENST00000623657 4412 ntBASIC2.11□□□□□ -2.07
USH2AO75445 CTNND1-210ENST00000524630 6553 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
USH2AO75445 AL031121.1-201ENST00000406553 254 ntBASIC2.11□□□□□ -2.07
USH2AO75445 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC2.11□□□□□ -2.07
USH2AO75445 ZYG11AP1-201ENST00000430329 837 ntBASIC2.11□□□□□ -2.07
USH2AO75445 SNORD125-201ENST00000459538 96 ntBASIC2.11□□□□□ -2.07
USH2AO75445 AP001486.1-201ENST00000463339 476 ntBASIC2.11□□□□□ -2.07
USH2AO75445 PMS2P3-207ENST00000529061 717 ntBASIC2.11□□□□□ -2.07
USH2AO75445 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC2.11□□□□□ -2.07
USH2AO75445 AC107982.3-201ENST00000584957 985 ntBASIC2.11□□□□□ -2.07
USH2AO75445 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
USH2AO75445 CBFA2T2-209ENST00000492345 7803 ntTSL 5 BASIC2.11□□□□□ -2.07
USH2AO75445 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC2.11□□□□□ -2.07
USH2AO75445 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
USH2AO75445 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
USH2AO75445 GDA-209ENST00000545168 5362 ntTSL 2 BASIC2.11□□□□□ -2.07
USH2AO75445 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
USH2AO75445 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC2.11□□□□□ -2.07
USH2AO75445 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC2.11□□□□□ -2.07
USH2AO75445 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC2.11□□□□□ -2.07
USH2AO75445 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC2.11□□□□□ -2.07
USH2AO75445 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
USH2AO75445 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC2.11□□□□□ -2.07
USH2AO75445 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
USH2AO75445 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC2.11□□□□□ -2.07
USH2AO75445 RNA5SP124-201ENST00000362739 110 ntBASIC2.11□□□□□ -2.07
USH2AO75445 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
USH2AO75445 LRRC37BP1-201ENST00000398851 714 ntBASIC2.11□□□□□ -2.07
USH2AO75445 RN7SKP33-201ENST00000410942 340 ntBASIC2.11□□□□□ -2.07
USH2AO75445 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.11□□□□□ -2.07
USH2AO75445 CRIP1P1-201ENST00000427567 185 ntBASIC2.11□□□□□ -2.07
USH2AO75445 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC2.11□□□□□ -2.07
USH2AO75445 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC2.11□□□□□ -2.07
USH2AO75445 AL133547.1-201ENST00000448546 220 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms