Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
RNF40O75150 MBL2-201ENST00000373968 3569 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
RNF40O75150 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC8.09□□□□□ -1.11
RNF40O75150 AC011008.2-201ENST00000624866 3352 ntBASIC8.09□□□□□ -1.11
RNF40O75150 AC097634.1-201ENST00000604491 2467 ntBASIC8.09□□□□□ -1.11
RNF40O75150 AL133243.4-201ENST00000623116 3109 ntBASIC8.09□□□□□ -1.11
RNF40O75150 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
RNF40O75150 GSTM2-204ENST00000369831 1730 ntTSL 2 BASIC8.09□□□□□ -1.11
RNF40O75150 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC8.08□□□□□ -1.12
RNF40O75150 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
RNF40O75150 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
RNF40O75150 HCG18-244ENST00000602516 2890 ntBASIC8.08□□□□□ -1.12
RNF40O75150 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC8.08□□□□□ -1.12
RNF40O75150 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC8.08□□□□□ -1.12
RNF40O75150 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC8.08□□□□□ -1.12
RNF40O75150 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
RNF40O75150 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC8.08□□□□□ -1.12
RNF40O75150 RGS6-205ENST00000406236 1476 ntAPPRIS ALT1 TSL 1 (best) BASIC8.08□□□□□ -1.12
RNF40O75150 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
RNF40O75150 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
RNF40O75150 ADGRB3-201ENST00000238918 2927 ntTSL 2 BASIC8.08□□□□□ -1.12
RNF40O75150 MEF2A-205ENST00000557942 5413 ntTSL 5 BASIC8.08□□□□□ -1.12
RNF40O75150 MFSD6-201ENST00000281416 4608 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
RNF40O75150 SGMS1-201ENST00000361543 1096 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
RNF40O75150 SNORA63.7-201ENST00000365579 123 ntBASIC8.08□□□□□ -1.12
RNF40O75150 MIR431-201ENST00000385266 114 ntBASIC8.08□□□□□ -1.12
RNF40O75150 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC8.08□□□□□ -1.12
RNF40O75150 MRPL50P2-201ENST00000416821 482 ntBASIC8.08□□□□□ -1.12
RNF40O75150 AC083875.1-201ENST00000419509 405 ntBASIC8.08□□□□□ -1.12
RNF40O75150 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC8.08□□□□□ -1.12
RNF40O75150 AL589872.1-201ENST00000426602 288 ntBASIC8.08□□□□□ -1.12
RNF40O75150 AC073335.1-201ENST00000427776 363 ntBASIC8.08□□□□□ -1.12
RNF40O75150 OR51AB1P-201ENST00000429046 620 ntBASIC8.08□□□□□ -1.12
RNF40O75150 PMS2P9-201ENST00000441237 515 ntBASIC8.08□□□□□ -1.12
RNF40O75150 PMS2P11-201ENST00000451831 574 ntBASIC8.08□□□□□ -1.12
RNF40O75150 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC8.08□□□□□ -1.12
RNF40O75150 TNR-IT1-201ENST00000455447 630 ntTSL 3 BASIC8.08□□□□□ -1.12
RNF40O75150 AC023194.1-201ENST00000493084 308 ntBASIC8.08□□□□□ -1.12
RNF40O75150 OR7E83P-201ENST00000511021 970 ntBASIC8.08□□□□□ -1.12
RNF40O75150 SNORA40.12-201ENST00000516329 111 ntBASIC8.08□□□□□ -1.12
RNF40O75150 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC8.08□□□□□ -1.12
RNF40O75150 HMGB1P41-201ENST00000520234 440 ntBASIC8.08□□□□□ -1.12
RNF40O75150 AC084026.2-201ENST00000521101 642 ntTSL 3 BASIC8.08□□□□□ -1.12
RNF40O75150 OR8A2P-201ENST00000528631 952 ntBASIC8.08□□□□□ -1.12
RNF40O75150 AC090692.1-201ENST00000531569 541 ntTSL 3 BASIC8.08□□□□□ -1.12
RNF40O75150 AC013828.2-201ENST00000532487 235 ntBASIC8.08□□□□□ -1.12
RNF40O75150 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC8.08□□□□□ -1.12
RNF40O75150 AL163153.1-201ENST00000554223 283 ntBASIC8.08□□□□□ -1.12
RNF40O75150 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
RNF40O75150 AC137056.1-202ENST00000575772 753 ntTSL 2 BASIC8.08□□□□□ -1.12
RNF40O75150 MIR5192-201ENST00000579892 92 ntBASIC8.08□□□□□ -1.12
RNF40O75150 AC005410.2-201ENST00000580270 463 ntTSL 3 BASIC8.08□□□□□ -1.12
RNF40O75150 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC8.08□□□□□ -1.12
RNF40O75150 POLR3GP2-201ENST00000588366 668 ntBASIC8.08□□□□□ -1.12
RNF40O75150 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC8.08□□□□□ -1.12
RNF40O75150 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC8.08□□□□□ -1.12
RNF40O75150 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC8.08□□□□□ -1.12
RNF40O75150 AC087893.2-201ENST00000623272 255 ntBASIC8.08□□□□□ -1.12
RNF40O75150 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC8.08□□□□□ -1.12
RNF40O75150 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC8.08□□□□□ -1.12
RNF40O75150 RBPJP7-201ENST00000442803 1447 ntBASIC8.08□□□□□ -1.12
RNF40O75150 RBPJP5-201ENST00000449433 1447 ntBASIC8.08□□□□□ -1.12
RNF40O75150 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
RNF40O75150 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
RNF40O75150 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC8.08□□□□□ -1.12
RNF40O75150 ATM-215ENST00000530958 5718 ntTSL 2 BASIC8.08□□□□□ -1.12
RNF40O75150 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC8.08□□□□□ -1.12
RNF40O75150 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
RNF40O75150 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
RNF40O75150 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC8.08□□□□□ -1.12
RNF40O75150 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC8.08□□□□□ -1.12
RNF40O75150 PIGN-221ENST00000638183 4046 ntTSL 5 BASIC8.07□□□□□ -1.12
RNF40O75150 AC018688.1-201ENST00000636528 1754 ntBASIC8.07□□□□□ -1.12
RNF40O75150 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC8.07□□□□□ -1.12
RNF40O75150 AL592429.1-201ENST00000403909 1473 ntBASIC8.07□□□□□ -1.12
RNF40O75150 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
RNF40O75150 CAST-202ENST00000325674 3356 ntTSL 5 BASIC8.07□□□□□ -1.12
RNF40O75150 LNX1-202ENST00000306888 3757 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
RNF40O75150 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
RNF40O75150 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC8.07□□□□□ -1.12
RNF40O75150 DCP1A-201ENST00000294241 1853 ntTSL 2 BASIC8.07□□□□□ -1.12
RNF40O75150 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
RNF40O75150 PYHIN1-202ENST00000368138 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
RNF40O75150 OR52K3P-202ENST00000641797 1729 ntBASIC8.07□□□□□ -1.12
RNF40O75150 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
RNF40O75150 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC8.07□□□□□ -1.12
RNF40O75150 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
RNF40O75150 AC068733.2-201ENST00000605434 1418 ntBASIC8.07□□□□□ -1.12
RNF40O75150 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC8.07□□□□□ -1.12
RNF40O75150 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
RNF40O75150 RPL10P16-201ENST00000325000 645 ntBASIC8.07□□□□□ -1.12
RNF40O75150 OR56A4-201ENST00000330728 1209 ntBASIC8.07□□□□□ -1.12
RNF40O75150 FAM32BP-201ENST00000344033 333 ntBASIC8.07□□□□□ -1.12
RNF40O75150 SNORA32.2-201ENST00000384049 122 ntBASIC8.07□□□□□ -1.12
RNF40O75150 RNU6-1297P-201ENST00000384415 104 ntBASIC8.07□□□□□ -1.12
RNF40O75150 RNVU1-15-201ENST00000384476 165 ntBASIC8.07□□□□□ -1.12
RNF40O75150 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
RNF40O75150 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
RNF40O75150 SNX18P13-201ENST00000412442 529 ntBASIC8.07□□□□□ -1.12
RNF40O75150 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms