Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AC104687.2-201ENST00000604442 342 ntBASIC5.02□□□□□ -1.61
SHOX2O60902 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.02□□□□□ -1.61
SHOX2O60902 FO681491.1-202ENST00000623392 737 ntBASIC5.02□□□□□ -1.61
SHOX2O60902 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SHOX2O60902 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SHOX2O60902 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
SHOX2O60902 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.02□□□□□ -1.61
SHOX2O60902 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SHOX2O60902 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.02□□□□□ -1.61
SHOX2O60902 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SHOX2O60902 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.01□□□□□ -1.61
SHOX2O60902 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.01□□□□□ -1.61
SHOX2O60902 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SHOX2O60902 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SHOX2O60902 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SHOX2O60902 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SHOX2O60902 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SHOX2O60902 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
SHOX2O60902 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SHOX2O60902 SNORA73.1-201ENST00000363107 205 ntBASIC5.01□□□□□ -1.61
SHOX2O60902 RN7SKP275-201ENST00000364626 301 ntBASIC5.01□□□□□ -1.61
SHOX2O60902 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.01□□□□□ -1.61
SHOX2O60902 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SHOX2O60902 MIR921-201ENST00000401133 56 ntBASIC5.01□□□□□ -1.61
SHOX2O60902 HSPA8P15-201ENST00000401676 786 ntBASIC5.01□□□□□ -1.61
SHOX2O60902 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC5.01□□□□□ -1.61
SHOX2O60902 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.01□□□□□ -1.61
SHOX2O60902 AL445213.1-201ENST00000412589 747 ntBASIC5.01□□□□□ -1.61
SHOX2O60902 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.01□□□□□ -1.61
SHOX2O60902 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.01□□□□□ -1.61
SHOX2O60902 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.01□□□□□ -1.61
SHOX2O60902 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.01□□□□□ -1.61
SHOX2O60902 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.01□□□□□ -1.61
SHOX2O60902 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC5.01□□□□□ -1.61
SHOX2O60902 AC006967.1-201ENST00000467608 589 ntBASIC5.01□□□□□ -1.61
SHOX2O60902 RN7SL799P-201ENST00000475891 298 ntBASIC5.01□□□□□ -1.61
SHOX2O60902 RN7SL41P-201ENST00000476144 297 ntBASIC5.01□□□□□ -1.61
SHOX2O60902 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC5.01□□□□□ -1.61
SHOX2O60902 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.01□□□□□ -1.61
SHOX2O60902 RN7SL558P-201ENST00000497468 299 ntBASIC5.01□□□□□ -1.61
SHOX2O60902 SNORA43.3-201ENST00000517240 103 ntBASIC5.01□□□□□ -1.61
SHOX2O60902 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.01□□□□□ -1.61
SHOX2O60902 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.01□□□□□ -1.61
SHOX2O60902 AP002373.2-201ENST00000541631 1060 ntBASIC5.01□□□□□ -1.61
SHOX2O60902 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.01□□□□□ -1.61
SHOX2O60902 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SHOX2O60902 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.01□□□□□ -1.61
SHOX2O60902 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.01□□□□□ -1.61
SHOX2O60902 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.01□□□□□ -1.61
SHOX2O60902 MIR3614-201ENST00000581261 86 ntBASIC5.01□□□□□ -1.61
SHOX2O60902 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.01□□□□□ -1.61
SHOX2O60902 RNU6-84P-201ENST00000607737 102 ntBASIC5.01□□□□□ -1.61
SHOX2O60902 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.01□□□□□ -1.61
SHOX2O60902 AL512624.1-201ENST00000613638 469 ntBASIC5.01□□□□□ -1.61
SHOX2O60902 MIR8080-201ENST00000622224 89 ntBASIC5.01□□□□□ -1.61
SHOX2O60902 AC015804.1-201ENST00000622935 435 ntBASIC5.01□□□□□ -1.61
SHOX2O60902 AC129778.1-202ENST00000623812 261 ntBASIC5.01□□□□□ -1.61
SHOX2O60902 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.01□□□□□ -1.61
SHOX2O60902 AL591379.1-207ENST00000635982 261 ntBASIC5.01□□□□□ -1.61
SHOX2O60902 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.01□□□□□ -1.61
SHOX2O60902 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
SHOX2O60902 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SHOX2O60902 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
SHOX2O60902 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
SHOX2O60902 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
SHOX2O60902 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
SHOX2O60902 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC5□□□□□ -1.61
SHOX2O60902 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
SHOX2O60902 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SHOX2O60902 LAP3P1-201ENST00000403648 294 ntBASIC5□□□□□ -1.61
SHOX2O60902 GLS-204ENST00000409428 816 ntTSL 2 BASIC5□□□□□ -1.61
SHOX2O60902 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5□□□□□ -1.61
SHOX2O60902 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5□□□□□ -1.61
SHOX2O60902 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5□□□□□ -1.61
SHOX2O60902 AL662874.1-201ENST00000426065 230 ntBASIC5□□□□□ -1.61
SHOX2O60902 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SHOX2O60902 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5□□□□□ -1.61
SHOX2O60902 CDY8P-201ENST00000428380 1279 ntBASIC5□□□□□ -1.61
SHOX2O60902 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC5□□□□□ -1.61
SHOX2O60902 AC005297.1-201ENST00000444765 862 ntBASIC5□□□□□ -1.61
SHOX2O60902 CDY20P-201ENST00000447528 1279 ntBASIC5□□□□□ -1.61
SHOX2O60902 LRRC37A14P-201ENST00000452297 462 ntBASIC5□□□□□ -1.61
SHOX2O60902 AC084754.1-201ENST00000463466 464 ntBASIC5□□□□□ -1.61
SHOX2O60902 AC138409.2-202ENST00000507274 458 ntBASIC5□□□□□ -1.61
SHOX2O60902 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5□□□□□ -1.61
SHOX2O60902 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5□□□□□ -1.61
SHOX2O60902 AC060775.1-201ENST00000518241 520 ntBASIC5□□□□□ -1.61
SHOX2O60902 TRIM77BP-201ENST00000524985 1119 ntBASIC5□□□□□ -1.61
SHOX2O60902 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5□□□□□ -1.61
SHOX2O60902 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5□□□□□ -1.61
SHOX2O60902 SMARCE1P3-201ENST00000553649 1231 ntBASIC5□□□□□ -1.61
SHOX2O60902 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5□□□□□ -1.61
SHOX2O60902 AC087477.6-201ENST00000559595 843 ntBASIC5□□□□□ -1.61
SHOX2O60902 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5□□□□□ -1.61
SHOX2O60902 OR7E18P-201ENST00000592589 702 ntBASIC5□□□□□ -1.61
SHOX2O60902 AL138895.2-201ENST00000603019 178 ntBASIC5□□□□□ -1.61
SHOX2O60902 AL139041.1-201ENST00000605480 610 ntBASIC5□□□□□ -1.61
SHOX2O60902 COX6CP4-201ENST00000605798 228 ntBASIC5□□□□□ -1.61
SHOX2O60902 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5□□□□□ -1.61
SHOX2O60902 AL669942.2-201ENST00000620352 697 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms