Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
SNX3O60493 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SNX3O60493 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5□□□□□ -1.61
SNX3O60493 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5□□□□□ -1.61
SNX3O60493 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5□□□□□ -1.61
SNX3O60493 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SNX3O60493 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5□□□□□ -1.61
SNX3O60493 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SNX3O60493 RN7SKP104-201ENST00000362605 328 ntBASIC5□□□□□ -1.61
SNX3O60493 RNU1-83P-201ENST00000363426 164 ntBASIC5□□□□□ -1.61
SNX3O60493 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC5□□□□□ -1.61
SNX3O60493 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5□□□□□ -1.61
SNX3O60493 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5□□□□□ -1.61
SNX3O60493 AL357078.2-201ENST00000416486 427 ntBASIC5□□□□□ -1.61
SNX3O60493 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5□□□□□ -1.61
SNX3O60493 MTND2P11-201ENST00000423638 648 ntBASIC5□□□□□ -1.61
SNX3O60493 AL390879.2-203ENST00000426943 1121 ntBASIC5□□□□□ -1.61
SNX3O60493 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5□□□□□ -1.61
SNX3O60493 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5□□□□□ -1.61
SNX3O60493 AL606490.7-201ENST00000433136 191 ntBASIC5□□□□□ -1.61
SNX3O60493 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5□□□□□ -1.61
SNX3O60493 AL590762.3-201ENST00000436372 640 ntBASIC5□□□□□ -1.61
SNX3O60493 ARAFP2-201ENST00000440565 559 ntBASIC5□□□□□ -1.61
SNX3O60493 ARL4AP3-201ENST00000441452 574 ntBASIC5□□□□□ -1.61
SNX3O60493 Z80107.2-201ENST00000445127 392 ntBASIC5□□□□□ -1.61
SNX3O60493 AC105399.1-202ENST00000447303 205 ntBASIC5□□□□□ -1.61
SNX3O60493 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
SNX3O60493 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5□□□□□ -1.61
SNX3O60493 AC020779.1-201ENST00000478757 796 ntBASIC5□□□□□ -1.61
SNX3O60493 RPL21P6-201ENST00000479171 504 ntBASIC5□□□□□ -1.61
SNX3O60493 AC091544.1-201ENST00000484702 348 ntBASIC5□□□□□ -1.61
SNX3O60493 OR11I1P-201ENST00000486033 954 ntBASIC5□□□□□ -1.61
SNX3O60493 SNRPCP11-201ENST00000492453 205 ntBASIC5□□□□□ -1.61
SNX3O60493 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5□□□□□ -1.61
SNX3O60493 AK6-204ENST00000512561 587 ntTSL 5 BASIC5□□□□□ -1.61
SNX3O60493 SETP12-201ENST00000514068 805 ntBASIC5□□□□□ -1.61
SNX3O60493 AC016550.3-201ENST00000515706 767 ntBASIC5□□□□□ -1.61
SNX3O60493 RNU2-45P-201ENST00000516068 187 ntBASIC5□□□□□ -1.61
SNX3O60493 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC5□□□□□ -1.61
SNX3O60493 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5□□□□□ -1.61
SNX3O60493 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5□□□□□ -1.61
SNX3O60493 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5□□□□□ -1.61
SNX3O60493 MED21-206ENST00000546323 575 ntTSL 3 BASIC5□□□□□ -1.61
SNX3O60493 LINC00557-201ENST00000563184 1279 ntBASIC5□□□□□ -1.61
SNX3O60493 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC5□□□□□ -1.61
SNX3O60493 RN7SL176P-201ENST00000580352 264 ntBASIC5□□□□□ -1.61
SNX3O60493 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5□□□□□ -1.61
SNX3O60493 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5□□□□□ -1.61
SNX3O60493 AP005432.2-201ENST00000608162 586 ntBASIC5□□□□□ -1.61
SNX3O60493 AC005021.1-201ENST00000608730 355 ntBASIC5□□□□□ -1.61
SNX3O60493 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC5□□□□□ -1.61
SNX3O60493 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5□□□□□ -1.61
SNX3O60493 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5□□□□□ -1.61
SNX3O60493 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5□□□□□ -1.61
SNX3O60493 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
SNX3O60493 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
SNX3O60493 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5□□□□□ -1.61
SNX3O60493 AC107068.1-201ENST00000563286 4218 ntBASIC5□□□□□ -1.61
SNX3O60493 PROS2P-201ENST00000474651 1951 ntBASIC5□□□□□ -1.61
SNX3O60493 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
SNX3O60493 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
SNX3O60493 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.99□□□□□ -1.61
SNX3O60493 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SNX3O60493 AC007342.5-201ENST00000571340 2142 ntBASIC4.99□□□□□ -1.61
SNX3O60493 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SNX3O60493 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SNX3O60493 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SNX3O60493 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SNX3O60493 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SNX3O60493 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SNX3O60493 YES1P1-201ENST00000418510 1628 ntBASIC4.99□□□□□ -1.61
SNX3O60493 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.99□□□□□ -1.61
SNX3O60493 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
SNX3O60493 RNA5SP90-201ENST00000364801 99 ntBASIC4.99□□□□□ -1.61
SNX3O60493 RNU4-2-201ENST00000365668 141 ntBASIC4.99□□□□□ -1.61
SNX3O60493 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC4.99□□□□□ -1.61
SNX3O60493 AL133388.1-201ENST00000404509 287 ntBASIC4.99□□□□□ -1.61
SNX3O60493 SLC20A1P1-201ENST00000413906 956 ntBASIC4.99□□□□□ -1.61
SNX3O60493 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.99□□□□□ -1.61
SNX3O60493 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.99□□□□□ -1.61
SNX3O60493 CYCSP10-201ENST00000417973 294 ntBASIC4.99□□□□□ -1.61
SNX3O60493 QRSL1P2-201ENST00000418582 964 ntBASIC4.99□□□□□ -1.61
SNX3O60493 SLC35E1P1-201ENST00000419313 864 ntBASIC4.99□□□□□ -1.61
SNX3O60493 SETP10-201ENST00000424368 814 ntBASIC4.99□□□□□ -1.61
SNX3O60493 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.99□□□□□ -1.61
SNX3O60493 AL356121.1-201ENST00000442911 156 ntBASIC4.99□□□□□ -1.61
SNX3O60493 LDHBP2-201ENST00000456969 1005 ntBASIC4.99□□□□□ -1.61
SNX3O60493 RPS17P2-201ENST00000461663 408 ntBASIC4.99□□□□□ -1.61
SNX3O60493 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SNX3O60493 NACAP5-201ENST00000509863 636 ntBASIC4.99□□□□□ -1.61
SNX3O60493 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC4.99□□□□□ -1.61
SNX3O60493 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.99□□□□□ -1.61
SNX3O60493 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.99□□□□□ -1.61
SNX3O60493 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.99□□□□□ -1.61
SNX3O60493 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.99□□□□□ -1.61
SNX3O60493 IGBP1P1-201ENST00000554337 1009 ntBASIC4.99□□□□□ -1.61
SNX3O60493 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.99□□□□□ -1.61
SNX3O60493 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC4.99□□□□□ -1.61
SNX3O60493 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC4.99□□□□□ -1.61
SNX3O60493 SNORD39.2-201ENST00000579995 76 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 169.9 ms