Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
SSSCA1O60232 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC3.93□□□□□ -1.78
SSSCA1O60232 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SSSCA1O60232 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SSSCA1O60232 ICE2P1-201ENST00000512800 1849 ntBASIC3.93□□□□□ -1.78
SSSCA1O60232 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC3.92□□□□□ -1.78
SSSCA1O60232 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SSSCA1O60232 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC3.92□□□□□ -1.78
SSSCA1O60232 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
SSSCA1O60232 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SSSCA1O60232 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
SSSCA1O60232 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SSSCA1O60232 IRF5P1-201ENST00000504852 2164 ntBASIC3.92□□□□□ -1.78
SSSCA1O60232 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SSSCA1O60232 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SSSCA1O60232 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
SSSCA1O60232 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SSSCA1O60232 RN7SKP104-201ENST00000362605 328 ntBASIC3.92□□□□□ -1.78
SSSCA1O60232 RNU1-20P-201ENST00000363314 162 ntBASIC3.92□□□□□ -1.78
SSSCA1O60232 RN7SKP124-201ENST00000364730 341 ntBASIC3.92□□□□□ -1.78
SSSCA1O60232 AL136116.2-201ENST00000404020 785 ntBASIC3.92□□□□□ -1.78
SSSCA1O60232 RNA5SP146-201ENST00000410743 123 ntBASIC3.92□□□□□ -1.78
SSSCA1O60232 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC3.92□□□□□ -1.78
SSSCA1O60232 XIST-201ENST00000416330 750 ntTSL 2 BASIC3.92□□□□□ -1.78
SSSCA1O60232 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC3.92□□□□□ -1.78
SSSCA1O60232 RPS3P2-201ENST00000421346 701 ntBASIC3.92□□□□□ -1.78
SSSCA1O60232 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC3.92□□□□□ -1.78
SSSCA1O60232 AC004448.2-201ENST00000422360 586 ntBASIC3.92□□□□□ -1.78
SSSCA1O60232 AC115283.1-201ENST00000427353 400 ntBASIC3.92□□□□□ -1.78
SSSCA1O60232 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC3.92□□□□□ -1.78
SSSCA1O60232 AC064862.4-201ENST00000442180 334 ntBASIC3.92□□□□□ -1.78
SSSCA1O60232 AC073587.1-201ENST00000447093 876 ntBASIC3.92□□□□□ -1.78
SSSCA1O60232 APOA2-207ENST00000470459 416 ntTSL 5 BASIC3.92□□□□□ -1.78
SSSCA1O60232 RN7SL41P-201ENST00000476144 297 ntBASIC3.92□□□□□ -1.78
SSSCA1O60232 AK5-208ENST00000478255 556 ntTSL 2 BASIC3.92□□□□□ -1.78
SSSCA1O60232 STMN1P2-201ENST00000508435 439 ntBASIC3.92□□□□□ -1.78
SSSCA1O60232 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC3.92□□□□□ -1.78
SSSCA1O60232 RNU6-709P-201ENST00000517257 104 ntBASIC3.92□□□□□ -1.78
SSSCA1O60232 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC3.92□□□□□ -1.78
SSSCA1O60232 AC134698.5-201ENST00000519444 336 ntBASIC3.92□□□□□ -1.78
SSSCA1O60232 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC3.92□□□□□ -1.78
SSSCA1O60232 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC3.92□□□□□ -1.78
SSSCA1O60232 CYCSP28-201ENST00000534284 321 ntBASIC3.92□□□□□ -1.78
SSSCA1O60232 AC027544.3-201ENST00000535082 757 ntBASIC3.92□□□□□ -1.78
SSSCA1O60232 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC3.92□□□□□ -1.78
SSSCA1O60232 AC126177.5-201ENST00000549599 178 ntBASIC3.92□□□□□ -1.78
SSSCA1O60232 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC3.92□□□□□ -1.78
SSSCA1O60232 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC3.92□□□□□ -1.78
SSSCA1O60232 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SSSCA1O60232 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC3.92□□□□□ -1.78
SSSCA1O60232 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC3.92□□□□□ -1.78
SSSCA1O60232 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC3.92□□□□□ -1.78
SSSCA1O60232 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC3.92□□□□□ -1.78
SSSCA1O60232 CCDC58P1-201ENST00000578567 430 ntBASIC3.92□□□□□ -1.78
SSSCA1O60232 RN7SL176P-201ENST00000580352 264 ntBASIC3.92□□□□□ -1.78
SSSCA1O60232 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC3.92□□□□□ -1.78
SSSCA1O60232 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC3.92□□□□□ -1.78
SSSCA1O60232 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC3.92□□□□□ -1.78
SSSCA1O60232 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC3.92□□□□□ -1.78
SSSCA1O60232 AC005377.1-201ENST00000605126 456 ntBASIC3.92□□□□□ -1.78
SSSCA1O60232 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC3.92□□□□□ -1.78
SSSCA1O60232 AC087821.1-201ENST00000623639 567 ntBASIC3.92□□□□□ -1.78
SSSCA1O60232 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC3.92□□□□□ -1.78
SSSCA1O60232 AC006453.5-201ENST00000636451 619 ntBASIC3.92□□□□□ -1.78
SSSCA1O60232 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC3.92□□□□□ -1.78
SSSCA1O60232 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC3.92□□□□□ -1.78
SSSCA1O60232 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.92□□□□□ -1.78
SSSCA1O60232 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SSSCA1O60232 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC3.92□□□□□ -1.78
SSSCA1O60232 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
SSSCA1O60232 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC3.92□□□□□ -1.78
SSSCA1O60232 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
SSSCA1O60232 DLD-204ENST00000437604 1859 ntTSL 2 BASIC3.92□□□□□ -1.78
SSSCA1O60232 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
SSSCA1O60232 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC3.92□□□□□ -1.78
SSSCA1O60232 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC3.92□□□□□ -1.78
SSSCA1O60232 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
SSSCA1O60232 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SSSCA1O60232 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC3.91□□□□□ -1.78
SSSCA1O60232 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SSSCA1O60232 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
SSSCA1O60232 AP001002.1-201ENST00000625148 1513 ntBASIC3.91□□□□□ -1.78
SSSCA1O60232 AC008758.3-201ENST00000507003 1829 ntBASIC3.91□□□□□ -1.78
SSSCA1O60232 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
SSSCA1O60232 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
SSSCA1O60232 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC3.91□□□□□ -1.78
SSSCA1O60232 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
SSSCA1O60232 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC3.91□□□□□ -1.78
SSSCA1O60232 AC027290.2-201ENST00000623210 18662 ntBASIC3.91□□□□□ -1.78
SSSCA1O60232 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC3.91□□□□□ -1.78
SSSCA1O60232 BMS1P3-201ENST00000372011 932 ntBASIC3.91□□□□□ -1.78
SSSCA1O60232 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SSSCA1O60232 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC3.91□□□□□ -1.78
SSSCA1O60232 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC3.91□□□□□ -1.78
SSSCA1O60232 AC108075.1-201ENST00000424692 529 ntBASIC3.91□□□□□ -1.78
SSSCA1O60232 AC104843.2-201ENST00000427666 297 ntBASIC3.91□□□□□ -1.78
SSSCA1O60232 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC3.91□□□□□ -1.78
SSSCA1O60232 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
SSSCA1O60232 AC092447.2-201ENST00000435487 669 ntBASIC3.91□□□□□ -1.78
SSSCA1O60232 CLNS1AP1-201ENST00000435954 682 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms