Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AC017104.5-201ENST00000637647 639 ntBASIC5.72□□□□□ -1.49
PHGDHO43175 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PHGDHO43175 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PHGDHO43175 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PHGDHO43175 AC007996.1-201ENST00000620414 2821 ntBASIC5.72□□□□□ -1.49
PHGDHO43175 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.72□□□□□ -1.49
PHGDHO43175 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
PHGDHO43175 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
PHGDHO43175 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
PHGDHO43175 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PHGDHO43175 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.72□□□□□ -1.49
PHGDHO43175 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PHGDHO43175 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PHGDHO43175 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PHGDHO43175 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
PHGDHO43175 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
PHGDHO43175 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.49
PHGDHO43175 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.71□□□□□ -1.49
PHGDHO43175 ADAM24P-201ENST00000398655 2101 ntBASIC5.71□□□□□ -1.5
PHGDHO43175 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PHGDHO43175 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PHGDHO43175 AC093311.1-201ENST00000506586 2021 ntBASIC5.71□□□□□ -1.5
PHGDHO43175 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PHGDHO43175 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PHGDHO43175 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PHGDHO43175 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.71□□□□□ -1.5
PHGDHO43175 RNU6-98P-201ENST00000384173 107 ntBASIC5.71□□□□□ -1.5
PHGDHO43175 RNU1-136P-201ENST00000384181 164 ntBASIC5.71□□□□□ -1.5
PHGDHO43175 RN7SKP29-201ENST00000410957 272 ntBASIC5.71□□□□□ -1.5
PHGDHO43175 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC5.71□□□□□ -1.5
PHGDHO43175 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.71□□□□□ -1.5
PHGDHO43175 RPS3AP37-201ENST00000419176 745 ntBASIC5.71□□□□□ -1.5
PHGDHO43175 AC005005.2-201ENST00000420779 380 ntBASIC5.71□□□□□ -1.5
PHGDHO43175 GTF2IP2-201ENST00000424290 697 ntBASIC5.71□□□□□ -1.5
PHGDHO43175 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC5.71□□□□□ -1.5
PHGDHO43175 BX276092.6-201ENST00000430476 250 ntBASIC5.71□□□□□ -1.5
PHGDHO43175 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC5.71□□□□□ -1.5
PHGDHO43175 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.71□□□□□ -1.5
PHGDHO43175 OR7E116P-201ENST00000448529 957 ntBASIC5.71□□□□□ -1.5
PHGDHO43175 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PHGDHO43175 BX276092.8-201ENST00000455722 250 ntBASIC5.71□□□□□ -1.5
PHGDHO43175 RNU7-140P-201ENST00000459546 60 ntBASIC5.71□□□□□ -1.5
PHGDHO43175 RPL7P40-201ENST00000481703 745 ntBASIC5.71□□□□□ -1.5
PHGDHO43175 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC5.71□□□□□ -1.5
PHGDHO43175 AC021006.1-201ENST00000489849 553 ntBASIC5.71□□□□□ -1.5
PHGDHO43175 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC5.71□□□□□ -1.5
PHGDHO43175 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.71□□□□□ -1.5
PHGDHO43175 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.71□□□□□ -1.5
PHGDHO43175 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.71□□□□□ -1.5
PHGDHO43175 GAPDHP62-201ENST00000515313 990 ntBASIC5.71□□□□□ -1.5
PHGDHO43175 PRELID3BP4-201ENST00000515476 571 ntBASIC5.71□□□□□ -1.5
PHGDHO43175 RNA5SP340-201ENST00000517132 107 ntBASIC5.71□□□□□ -1.5
PHGDHO43175 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC5.71□□□□□ -1.5
PHGDHO43175 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.71□□□□□ -1.5
PHGDHO43175 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.71□□□□□ -1.5
PHGDHO43175 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC5.71□□□□□ -1.5
PHGDHO43175 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.71□□□□□ -1.5
PHGDHO43175 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC5.71□□□□□ -1.5
PHGDHO43175 AC090888.2-201ENST00000559765 1144 ntBASIC5.71□□□□□ -1.5
PHGDHO43175 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PHGDHO43175 AC015802.2-201ENST00000589690 189 ntBASIC5.71□□□□□ -1.5
PHGDHO43175 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.71□□□□□ -1.5
PHGDHO43175 AC245036.5-201ENST00000596330 847 ntBASIC5.71□□□□□ -1.5
PHGDHO43175 AL136131.3-201ENST00000607600 188 ntBASIC5.71□□□□□ -1.5
PHGDHO43175 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.71□□□□□ -1.5
PHGDHO43175 AC108673.3-201ENST00000609183 335 ntBASIC5.71□□□□□ -1.5
PHGDHO43175 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.71□□□□□ -1.5
PHGDHO43175 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
PHGDHO43175 AC048344.4-201ENST00000619744 527 ntBASIC5.71□□□□□ -1.5
PHGDHO43175 AC009120.7-201ENST00000623452 780 ntBASIC5.71□□□□□ -1.5
PHGDHO43175 GMFB-210ENST00000628554 639 ntTSL 4 BASIC5.71□□□□□ -1.5
PHGDHO43175 AL121594.5-201ENST00000631724 573 ntBASIC5.71□□□□□ -1.5
PHGDHO43175 U6.107-201ENST00000637108 79 ntBASIC5.71□□□□□ -1.5
PHGDHO43175 BX649567.1-201ENST00000642071 1134 ntBASIC5.71□□□□□ -1.5
PHGDHO43175 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC5.71□□□□□ -1.5
PHGDHO43175 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
PHGDHO43175 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PHGDHO43175 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.71□□□□□ -1.5
PHGDHO43175 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.71□□□□□ -1.5
PHGDHO43175 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PHGDHO43175 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PHGDHO43175 AF287957.1-201ENST00000607368 1595 ntBASIC5.71□□□□□ -1.5
PHGDHO43175 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.71□□□□□ -1.5
PHGDHO43175 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
PHGDHO43175 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PHGDHO43175 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.71□□□□□ -1.5
PHGDHO43175 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
PHGDHO43175 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PHGDHO43175 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
PHGDHO43175 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PHGDHO43175 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PHGDHO43175 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.7□□□□□ -1.5
PHGDHO43175 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.7□□□□□ -1.5
PHGDHO43175 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.7□□□□□ -1.5
PHGDHO43175 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
PHGDHO43175 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PHGDHO43175 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PHGDHO43175 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PHGDHO43175 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PHGDHO43175 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms