Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 SEC63P2-201ENST00000503863 1939 ntBASIC6.94□□□□□ -1.3
SOX1O00570 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
SOX1O00570 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
SOX1O00570 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SOX1O00570 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SOX1O00570 RNU1-150P-201ENST00000362491 162 ntBASIC6.94□□□□□ -1.3
SOX1O00570 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
SOX1O00570 RPL34P19-201ENST00000415903 342 ntBASIC6.94□□□□□ -1.3
SOX1O00570 MTATP6P27-201ENST00000416987 621 ntBASIC6.94□□□□□ -1.3
SOX1O00570 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6.94□□□□□ -1.3
SOX1O00570 AC009480.2-201ENST00000422916 432 ntBASIC6.94□□□□□ -1.3
SOX1O00570 SLC44A3-AS1-205ENST00000424505 612 ntBASIC6.94□□□□□ -1.3
SOX1O00570 TRIM60P10Y-201ENST00000425589 751 ntBASIC6.94□□□□□ -1.3
SOX1O00570 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC6.94□□□□□ -1.3
SOX1O00570 HNRNPA1P29-201ENST00000426409 879 ntBASIC6.94□□□□□ -1.3
SOX1O00570 YWHAEP5-201ENST00000431545 765 ntBASIC6.94□□□□□ -1.3
SOX1O00570 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC6.94□□□□□ -1.3
SOX1O00570 AC234064.1-201ENST00000436312 247 ntBASIC6.94□□□□□ -1.3
SOX1O00570 TRIM60P8Y-201ENST00000436338 762 ntBASIC6.94□□□□□ -1.3
SOX1O00570 RPL12P3-201ENST00000440080 396 ntBASIC6.94□□□□□ -1.3
SOX1O00570 FDX1P2-201ENST00000450769 375 ntBASIC6.94□□□□□ -1.3
SOX1O00570 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC6.94□□□□□ -1.3
SOX1O00570 SIAH1P1-201ENST00000479411 923 ntBASIC6.94□□□□□ -1.3
SOX1O00570 AC006499.3-201ENST00000506077 748 ntBASIC6.94□□□□□ -1.3
SOX1O00570 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.94□□□□□ -1.3
SOX1O00570 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC6.94□□□□□ -1.3
SOX1O00570 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC6.94□□□□□ -1.3
SOX1O00570 RNA5SP434-201ENST00000516647 121 ntBASIC6.94□□□□□ -1.3
SOX1O00570 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC6.94□□□□□ -1.3
SOX1O00570 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SOX1O00570 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.94□□□□□ -1.3
SOX1O00570 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC6.94□□□□□ -1.3
SOX1O00570 RBM22P12-201ENST00000567098 1255 ntBASIC6.94□□□□□ -1.3
SOX1O00570 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC6.94□□□□□ -1.3
SOX1O00570 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC6.94□□□□□ -1.3
SOX1O00570 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC6.94□□□□□ -1.3
SOX1O00570 C8orf59P2-201ENST00000603441 271 ntBASIC6.94□□□□□ -1.3
SOX1O00570 AC112220.3-201ENST00000605502 502 ntBASIC6.94□□□□□ -1.3
SOX1O00570 MIR6820-201ENST00000611508 62 ntBASIC6.94□□□□□ -1.3
SOX1O00570 Six3os1_4.1-201ENST00000615706 324 ntBASIC6.94□□□□□ -1.3
SOX1O00570 RFPL4AP6-201ENST00000616792 846 ntBASIC6.94□□□□□ -1.3
SOX1O00570 AC006338.1-201ENST00000618453 749 ntBASIC6.94□□□□□ -1.3
SOX1O00570 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.94□□□□□ -1.3
SOX1O00570 AC012254.5-201ENST00000623573 478 ntBASIC6.94□□□□□ -1.3
SOX1O00570 AL157786.1-207ENST00000627771 695 ntBASIC6.94□□□□□ -1.3
SOX1O00570 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC6.94□□□□□ -1.3
SOX1O00570 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SOX1O00570 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SOX1O00570 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SOX1O00570 MTND5P26-201ENST00000426018 1752 ntBASIC6.94□□□□□ -1.3
SOX1O00570 ADH7-201ENST00000209665 2289 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SOX1O00570 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SOX1O00570 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC6.94□□□□□ -1.3
SOX1O00570 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SOX1O00570 IL1RL1-203ENST00000404917 3571 ntTSL 2 BASIC6.94□□□□□ -1.3
SOX1O00570 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SOX1O00570 EPHA4-203ENST00000409938 3363 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
SOX1O00570 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC6.94□□□□□ -1.3
SOX1O00570 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SOX1O00570 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SOX1O00570 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SOX1O00570 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SOX1O00570 CDH17-202ENST00000441892 2204 ntTSL 2 BASIC6.93□□□□□ -1.3
SOX1O00570 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SOX1O00570 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SOX1O00570 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SOX1O00570 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.93□□□□□ -1.3
SOX1O00570 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
SOX1O00570 AP002833.3-201ENST00000625075 2265 ntBASIC6.93□□□□□ -1.3
SOX1O00570 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
SOX1O00570 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC6.93□□□□□ -1.3
SOX1O00570 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SOX1O00570 PSG5-202ENST00000366175 1766 ntTSL 5 BASIC6.93□□□□□ -1.3
SOX1O00570 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC6.93□□□□□ -1.3
SOX1O00570 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
SOX1O00570 TTLL5-207ENST00000554510 2624 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SOX1O00570 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC6.93□□□□□ -1.3
SOX1O00570 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC6.93□□□□□ -1.3
SOX1O00570 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
SOX1O00570 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SOX1O00570 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SOX1O00570 SNORD115-47-201ENST00000391226 86 ntBASIC6.93□□□□□ -1.3
SOX1O00570 AC002524.1-201ENST00000411687 547 ntBASIC6.93□□□□□ -1.3
SOX1O00570 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC6.93□□□□□ -1.3
SOX1O00570 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SOX1O00570 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC6.93□□□□□ -1.3
SOX1O00570 AL035660.1-201ENST00000422041 222 ntBASIC6.93□□□□□ -1.3
SOX1O00570 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC6.93□□□□□ -1.3
SOX1O00570 DSTNP5-201ENST00000427921 523 ntBASIC6.93□□□□□ -1.3
SOX1O00570 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.93□□□□□ -1.3
SOX1O00570 AC239367.3-201ENST00000428996 814 ntBASIC6.93□□□□□ -1.3
SOX1O00570 Z68868.1-201ENST00000429048 544 ntBASIC6.93□□□□□ -1.3
SOX1O00570 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.93□□□□□ -1.3
SOX1O00570 FMO7P-201ENST00000436045 768 ntBASIC6.93□□□□□ -1.3
SOX1O00570 HMGB1P31-201ENST00000437242 427 ntBASIC6.93□□□□□ -1.3
SOX1O00570 RAB11AP1-201ENST00000442978 646 ntBASIC6.93□□□□□ -1.3
SOX1O00570 MTATP6P30-201ENST00000443540 664 ntBASIC6.93□□□□□ -1.3
SOX1O00570 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC6.93□□□□□ -1.3
SOX1O00570 RPL35AP28-201ENST00000459730 331 ntBASIC6.93□□□□□ -1.3
SOX1O00570 ANK3-207ENST00000460468 677 ntTSL 3 BASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms