Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
DDX39AO00148 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.73□□□□□ -1.49
DDX39AO00148 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.73□□□□□ -1.49
DDX39AO00148 AC008536.1-201ENST00000602872 669 ntBASIC5.73□□□□□ -1.49
DDX39AO00148 AC008833.1-201ENST00000611633 691 ntBASIC5.73□□□□□ -1.49
DDX39AO00148 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC5.73□□□□□ -1.49
DDX39AO00148 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.73□□□□□ -1.49
DDX39AO00148 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
DDX39AO00148 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
DDX39AO00148 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
DDX39AO00148 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.73□□□□□ -1.49
DDX39AO00148 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
DDX39AO00148 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.73□□□□□ -1.49
DDX39AO00148 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
DDX39AO00148 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.73□□□□□ -1.49
DDX39AO00148 AC092451.3-201ENST00000625067 1343 ntBASIC5.73□□□□□ -1.49
DDX39AO00148 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
DDX39AO00148 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
DDX39AO00148 AL606537.1-201ENST00000607258 2011 ntBASIC5.72□□□□□ -1.49
DDX39AO00148 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
DDX39AO00148 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.72□□□□□ -1.49
DDX39AO00148 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.72□□□□□ -1.49
DDX39AO00148 IRF5P1-201ENST00000504852 2164 ntBASIC5.72□□□□□ -1.49
DDX39AO00148 SAMM50P1-201ENST00000455403 1399 ntBASIC5.72□□□□□ -1.49
DDX39AO00148 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
DDX39AO00148 RN7SKP113-201ENST00000363891 295 ntBASIC5.72□□□□□ -1.49
DDX39AO00148 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.72□□□□□ -1.49
DDX39AO00148 SNORA2.3-201ENST00000383920 135 ntBASIC5.72□□□□□ -1.49
DDX39AO00148 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
DDX39AO00148 MIR937-201ENST00000401271 86 ntBASIC5.72□□□□□ -1.49
DDX39AO00148 AL035079.1-201ENST00000405210 287 ntBASIC5.72□□□□□ -1.49
DDX39AO00148 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.72□□□□□ -1.49
DDX39AO00148 RAB28P3-201ENST00000448325 597 ntBASIC5.72□□□□□ -1.49
DDX39AO00148 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.72□□□□□ -1.49
DDX39AO00148 SBDSP1-204ENST00000453858 737 ntBASIC5.72□□□□□ -1.49
DDX39AO00148 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.72□□□□□ -1.49
DDX39AO00148 RN7SL244P-201ENST00000493405 297 ntBASIC5.72□□□□□ -1.49
DDX39AO00148 COX6B1P5-201ENST00000509843 249 ntBASIC5.72□□□□□ -1.49
DDX39AO00148 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.72□□□□□ -1.49
DDX39AO00148 AC008676.3-201ENST00000521237 435 ntBASIC5.72□□□□□ -1.49
DDX39AO00148 EIF4A2P5-201ENST00000529914 499 ntBASIC5.72□□□□□ -1.49
DDX39AO00148 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.72□□□□□ -1.49
DDX39AO00148 AC122134.1-201ENST00000565664 1104 ntBASIC5.72□□□□□ -1.49
DDX39AO00148 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC5.72□□□□□ -1.49
DDX39AO00148 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.72□□□□□ -1.49
DDX39AO00148 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.72□□□□□ -1.49
DDX39AO00148 BNIP3P32-201ENST00000600015 554 ntBASIC5.72□□□□□ -1.49
DDX39AO00148 MEMO1P5-201ENST00000604810 406 ntBASIC5.72□□□□□ -1.49
DDX39AO00148 AC015922.4-201ENST00000612568 690 ntBASIC5.72□□□□□ -1.49
DDX39AO00148 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.72□□□□□ -1.49
DDX39AO00148 AC006840.1-201ENST00000623069 542 ntBASIC5.72□□□□□ -1.49
DDX39AO00148 AC091905.4-201ENST00000623432 202 ntBASIC5.72□□□□□ -1.49
DDX39AO00148 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.72□□□□□ -1.49
DDX39AO00148 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.72□□□□□ -1.49
DDX39AO00148 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.72□□□□□ -1.49
DDX39AO00148 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
DDX39AO00148 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.72□□□□□ -1.49
DDX39AO00148 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
DDX39AO00148 AC140134.1-201ENST00000511830 3544 ntBASIC5.71□□□□□ -1.49
DDX39AO00148 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
DDX39AO00148 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.49
DDX39AO00148 AC063976.2-201ENST00000425667 3556 ntBASIC5.71□□□□□ -1.49
DDX39AO00148 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
DDX39AO00148 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
DDX39AO00148 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.71□□□□□ -1.5
DDX39AO00148 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
DDX39AO00148 AC093297.3-201ENST00000607056 2517 ntBASIC5.71□□□□□ -1.5
DDX39AO00148 Z95114.1-201ENST00000624264 14574 ntBASIC5.71□□□□□ -1.5
DDX39AO00148 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
DDX39AO00148 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.71□□□□□ -1.5
DDX39AO00148 RN7SKP95-201ENST00000362860 303 ntBASIC5.71□□□□□ -1.5
DDX39AO00148 RNU11-201ENST00000387069 134 ntBASIC5.71□□□□□ -1.5
DDX39AO00148 MT-RNR1-201ENST00000389680 954 ntBASIC5.71□□□□□ -1.5
DDX39AO00148 RNA5SP105-201ENST00000391123 113 ntBASIC5.71□□□□□ -1.5
DDX39AO00148 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.71□□□□□ -1.5
DDX39AO00148 RPL12P9-201ENST00000412942 488 ntBASIC5.71□□□□□ -1.5
DDX39AO00148 AL392003.1-201ENST00000434394 243 ntBASIC5.71□□□□□ -1.5
DDX39AO00148 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.71□□□□□ -1.5
DDX39AO00148 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC5.71□□□□□ -1.5
DDX39AO00148 TCEA1P1-201ENST00000449716 880 ntBASIC5.71□□□□□ -1.5
DDX39AO00148 IGHV5-78-201ENST00000450948 295 ntBASIC5.71□□□□□ -1.5
DDX39AO00148 AC091180.1-201ENST00000462104 372 ntBASIC5.71□□□□□ -1.5
DDX39AO00148 HMGN1P8-201ENST00000463578 288 ntBASIC5.71□□□□□ -1.5
DDX39AO00148 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.71□□□□□ -1.5
DDX39AO00148 RNU6-319P-201ENST00000516025 108 ntBASIC5.71□□□□□ -1.5
DDX39AO00148 RNA5SP43-201ENST00000516559 110 ntBASIC5.71□□□□□ -1.5
DDX39AO00148 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.71□□□□□ -1.5
DDX39AO00148 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.71□□□□□ -1.5
DDX39AO00148 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.71□□□□□ -1.5
DDX39AO00148 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.71□□□□□ -1.5
DDX39AO00148 MIR4675-201ENST00000577898 77 ntBASIC5.71□□□□□ -1.5
DDX39AO00148 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.71□□□□□ -1.5
DDX39AO00148 FAM60CP-201ENST00000591086 664 ntBASIC5.71□□□□□ -1.5
DDX39AO00148 AL360012.1-201ENST00000602813 131 ntBASIC5.71□□□□□ -1.5
DDX39AO00148 AL135786.2-201ENST00000608422 615 ntBASIC5.71□□□□□ -1.5
DDX39AO00148 Z95327.3-201ENST00000610385 572 ntBASIC5.71□□□□□ -1.5
DDX39AO00148 AC107905.1-201ENST00000616204 426 ntBASIC5.71□□□□□ -1.5
DDX39AO00148 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.71□□□□□ -1.5
DDX39AO00148 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.71□□□□□ -1.5
DDX39AO00148 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms