Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 AC021146.7-201ENST00000509604 775 ntBASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 BTG4P1-201ENST00000510421 183 ntBASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 AC034244.2-201ENST00000514668 858 ntBASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 MTND2P7-201ENST00000521337 640 ntBASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 AC022832.1-201ENST00000530718 645 ntBASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 AC087888.1-201ENST00000550884 1254 ntBASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 AC004948.1-201ENST00000609858 672 ntBASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 AL139407.1-201ENST00000613826 1175 ntBASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 AC109583.2-201ENST00000617367 129 ntBASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 AC090510.2-201ENST00000617465 629 ntBASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 AL356490.1-201ENST00000623079 479 ntBASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 AC073592.7-201ENST00000623659 507 ntBASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 CYP4F35P-202ENST00000636121 390 ntBASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 AC006453.5-201ENST00000636451 619 ntBASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 AC009501.3-201ENST00000605001 1352 ntBASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
NPIPA3F8WFD2 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.88□□□□□ -1.63
NPIPA3F8WFD2 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.88□□□□□ -1.63
NPIPA3F8WFD2 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
NPIPA3F8WFD2 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NPIPA3F8WFD2 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.88□□□□□ -1.63
NPIPA3F8WFD2 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
NPIPA3F8WFD2 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC4.88□□□□□ -1.63
NPIPA3F8WFD2 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NPIPA3F8WFD2 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
NPIPA3F8WFD2 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
NPIPA3F8WFD2 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
NPIPA3F8WFD2 AC019072.1-201ENST00000604535 1551 ntBASIC4.88□□□□□ -1.63
NPIPA3F8WFD2 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NPIPA3F8WFD2 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC4.88□□□□□ -1.63
NPIPA3F8WFD2 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
NPIPA3F8WFD2 U8.4-201ENST00000363626 134 ntBASIC4.88□□□□□ -1.63
NPIPA3F8WFD2 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC4.88□□□□□ -1.63
NPIPA3F8WFD2 RNU6-729P-201ENST00000384399 107 ntBASIC4.88□□□□□ -1.63
NPIPA3F8WFD2 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
NPIPA3F8WFD2 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.88□□□□□ -1.63
NPIPA3F8WFD2 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.88□□□□□ -1.63
NPIPA3F8WFD2 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.88□□□□□ -1.63
NPIPA3F8WFD2 AC005033.1-201ENST00000428904 813 ntBASIC4.88□□□□□ -1.63
NPIPA3F8WFD2 RPL12P17-201ENST00000432393 498 ntBASIC4.88□□□□□ -1.63
NPIPA3F8WFD2 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC4.88□□□□□ -1.63
NPIPA3F8WFD2 PA2G4P6-201ENST00000438325 1197 ntBASIC4.88□□□□□ -1.63
NPIPA3F8WFD2 AL672138.1-201ENST00000450604 1015 ntBASIC4.88□□□□□ -1.63
NPIPA3F8WFD2 SBDSP1-204ENST00000453858 737 ntBASIC4.88□□□□□ -1.63
NPIPA3F8WFD2 AL035090.1-201ENST00000454835 332 ntBASIC4.88□□□□□ -1.63
NPIPA3F8WFD2 AC107015.1-201ENST00000466902 747 ntBASIC4.88□□□□□ -1.63
NPIPA3F8WFD2 RN7SL826P-201ENST00000479724 288 ntBASIC4.88□□□□□ -1.63
NPIPA3F8WFD2 RPL5P22-201ENST00000480199 884 ntBASIC4.88□□□□□ -1.63
NPIPA3F8WFD2 HMGB1P3-201ENST00000502802 616 ntBASIC4.88□□□□□ -1.63
NPIPA3F8WFD2 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC4.88□□□□□ -1.63
NPIPA3F8WFD2 AC109464.1-201ENST00000511091 819 ntBASIC4.88□□□□□ -1.63
NPIPA3F8WFD2 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.88□□□□□ -1.63
NPIPA3F8WFD2 AC097486.1-201ENST00000515331 210 ntBASIC4.88□□□□□ -1.63
NPIPA3F8WFD2 FTH1P11-201ENST00000517577 551 ntBASIC4.88□□□□□ -1.63
NPIPA3F8WFD2 HMGB1P46-201ENST00000520062 610 ntBASIC4.88□□□□□ -1.63
NPIPA3F8WFD2 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.88□□□□□ -1.63
NPIPA3F8WFD2 AP000859.1-201ENST00000525536 307 ntBASIC4.88□□□□□ -1.63
NPIPA3F8WFD2 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.88□□□□□ -1.63
NPIPA3F8WFD2 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NPIPA3F8WFD2 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.88□□□□□ -1.63
NPIPA3F8WFD2 OR11J2P-201ENST00000555298 907 ntBASIC4.88□□□□□ -1.63
NPIPA3F8WFD2 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.88□□□□□ -1.63
NPIPA3F8WFD2 RPL10P14-201ENST00000565265 298 ntBASIC4.88□□□□□ -1.63
NPIPA3F8WFD2 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.88□□□□□ -1.63
NPIPA3F8WFD2 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
NPIPA3F8WFD2 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.88□□□□□ -1.63
NPIPA3F8WFD2 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC4.88□□□□□ -1.63
NPIPA3F8WFD2 BNIP3P32-201ENST00000600015 554 ntBASIC4.88□□□□□ -1.63
NPIPA3F8WFD2 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NPIPA3F8WFD2 OR4H6P-202ENST00000603819 340 ntBASIC4.88□□□□□ -1.63
NPIPA3F8WFD2 AC007786.3-201ENST00000615154 596 ntBASIC4.88□□□□□ -1.63
NPIPA3F8WFD2 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.88□□□□□ -1.63
NPIPA3F8WFD2 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NPIPA3F8WFD2 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms