Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 AC011626.1-201ENST00000604710 562 ntBASIC4.89□□□□□ -1.63
IFT52Q9Y366 AC004241.3-201ENST00000611728 517 ntBASIC4.89□□□□□ -1.63
IFT52Q9Y366 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
IFT52Q9Y366 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
IFT52Q9Y366 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
IFT52Q9Y366 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
IFT52Q9Y366 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
IFT52Q9Y366 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.89□□□□□ -1.63
IFT52Q9Y366 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
IFT52Q9Y366 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
IFT52Q9Y366 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.89□□□□□ -1.63
IFT52Q9Y366 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
IFT52Q9Y366 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.89□□□□□ -1.63
IFT52Q9Y366 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
IFT52Q9Y366 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.89□□□□□ -1.63
IFT52Q9Y366 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC4.89□□□□□ -1.63
IFT52Q9Y366 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
IFT52Q9Y366 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.89□□□□□ -1.63
IFT52Q9Y366 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
IFT52Q9Y366 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
IFT52Q9Y366 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
IFT52Q9Y366 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
IFT52Q9Y366 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.88□□□□□ -1.63
IFT52Q9Y366 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
IFT52Q9Y366 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
IFT52Q9Y366 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
IFT52Q9Y366 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
IFT52Q9Y366 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
IFT52Q9Y366 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
IFT52Q9Y366 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
IFT52Q9Y366 MIR133B-201ENST00000362210 119 ntBASIC4.88□□□□□ -1.63
IFT52Q9Y366 RN7SKP124-201ENST00000364730 341 ntBASIC4.88□□□□□ -1.63
IFT52Q9Y366 RNA5SP223-201ENST00000365174 120 ntBASIC4.88□□□□□ -1.63
IFT52Q9Y366 FIG4-202ENST00000368941 791 ntTSL 3 BASIC4.88□□□□□ -1.63
IFT52Q9Y366 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.88□□□□□ -1.63
IFT52Q9Y366 MIR621-201ENST00000384919 96 ntBASIC4.88□□□□□ -1.63
IFT52Q9Y366 RNA5SP105-201ENST00000391123 113 ntBASIC4.88□□□□□ -1.63
IFT52Q9Y366 OR8V1P-201ENST00000395193 873 ntBASIC4.88□□□□□ -1.63
IFT52Q9Y366 RN7SKP125-201ENST00000410481 302 ntBASIC4.88□□□□□ -1.63
IFT52Q9Y366 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC4.88□□□□□ -1.63
IFT52Q9Y366 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.88□□□□□ -1.63
IFT52Q9Y366 AC013470.3-201ENST00000420252 1194 ntBASIC4.88□□□□□ -1.63
IFT52Q9Y366 RPL36AP10-201ENST00000421785 322 ntBASIC4.88□□□□□ -1.63
IFT52Q9Y366 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC4.88□□□□□ -1.63
IFT52Q9Y366 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.88□□□□□ -1.63
IFT52Q9Y366 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC4.88□□□□□ -1.63
IFT52Q9Y366 AL390119.1-201ENST00000440329 312 ntBASIC4.88□□□□□ -1.63
IFT52Q9Y366 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.88□□□□□ -1.63
IFT52Q9Y366 AC073109.1-201ENST00000445066 978 ntBASIC4.88□□□□□ -1.63
IFT52Q9Y366 HMGN1P36-201ENST00000446623 298 ntBASIC4.88□□□□□ -1.63
IFT52Q9Y366 NOP56P2-201ENST00000447491 769 ntBASIC4.88□□□□□ -1.63
IFT52Q9Y366 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.88□□□□□ -1.63
IFT52Q9Y366 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.88□□□□□ -1.63
IFT52Q9Y366 RPS27AP2-201ENST00000457576 465 ntBASIC4.88□□□□□ -1.63
IFT52Q9Y366 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC4.88□□□□□ -1.63
IFT52Q9Y366 NIFKP7-201ENST00000503365 834 ntBASIC4.88□□□□□ -1.63
IFT52Q9Y366 HMGB3P16-201ENST00000508037 287 ntBASIC4.88□□□□□ -1.63
IFT52Q9Y366 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
IFT52Q9Y366 AC006427.1-201ENST00000514359 712 ntBASIC4.88□□□□□ -1.63
IFT52Q9Y366 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.88□□□□□ -1.63
IFT52Q9Y366 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.88□□□□□ -1.63
IFT52Q9Y366 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.88□□□□□ -1.63
IFT52Q9Y366 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.88□□□□□ -1.63
IFT52Q9Y366 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.88□□□□□ -1.63
IFT52Q9Y366 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.88□□□□□ -1.63
IFT52Q9Y366 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC4.88□□□□□ -1.63
IFT52Q9Y366 RN7SL708P-201ENST00000580952 299 ntBASIC4.88□□□□□ -1.63
IFT52Q9Y366 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC4.88□□□□□ -1.63
IFT52Q9Y366 AL133406.3-201ENST00000606817 541 ntBASIC4.88□□□□□ -1.63
IFT52Q9Y366 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.88□□□□□ -1.63
IFT52Q9Y366 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.88□□□□□ -1.63
IFT52Q9Y366 AC127024.6-201ENST00000621598 424 ntBASIC4.88□□□□□ -1.63
IFT52Q9Y366 AL359742.1-201ENST00000622497 540 ntBASIC4.88□□□□□ -1.63
IFT52Q9Y366 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC4.88□□□□□ -1.63
IFT52Q9Y366 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
IFT52Q9Y366 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
IFT52Q9Y366 MIR1910-201ENST00000636955 80 ntBASIC4.88□□□□□ -1.63
IFT52Q9Y366 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.88□□□□□ -1.63
IFT52Q9Y366 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
IFT52Q9Y366 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
IFT52Q9Y366 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
IFT52Q9Y366 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
IFT52Q9Y366 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC4.88□□□□□ -1.63
IFT52Q9Y366 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.88□□□□□ -1.63
IFT52Q9Y366 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.87□□□□□ -1.63
IFT52Q9Y366 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
IFT52Q9Y366 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
IFT52Q9Y366 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
IFT52Q9Y366 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
IFT52Q9Y366 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
IFT52Q9Y366 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
IFT52Q9Y366 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
IFT52Q9Y366 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.87□□□□□ -1.63
IFT52Q9Y366 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.87□□□□□ -1.63
IFT52Q9Y366 MIR105-1-201ENST00000385222 81 ntBASIC4.87□□□□□ -1.63
IFT52Q9Y366 AC013442.1-201ENST00000397347 228 ntBASIC4.87□□□□□ -1.63
IFT52Q9Y366 RPS24P12-201ENST00000402084 394 ntBASIC4.87□□□□□ -1.63
IFT52Q9Y366 AL391422.1-201ENST00000402155 436 ntBASIC4.87□□□□□ -1.63
IFT52Q9Y366 AC007738.1-201ENST00000413892 348 ntBASIC4.87□□□□□ -1.63
IFT52Q9Y366 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms