Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
ZC3H4Q9UPT8 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
ZC3H4Q9UPT8 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC8.18□□□□□ -1.1
ZC3H4Q9UPT8 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
ZC3H4Q9UPT8 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC8.18□□□□□ -1.1
ZC3H4Q9UPT8 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 AL008638.3-201ENST00000623027 5182 ntBASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 AC092821.2-201ENST00000545710 2042 ntBASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 Y_RNA.535-201ENST00000384612 99 ntBASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 MT-TL1-201ENST00000386347 75 ntBASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 AC087752.1-201ENST00000391360 558 ntBASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 CYCSP45-201ENST00000402289 315 ntBASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 CCNG1P1-201ENST00000406783 885 ntBASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 LSM5-205ENST00000409952 687 ntTSL 4 BASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 PIGPP2-201ENST00000411569 458 ntBASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 AC017035.1-201ENST00000411999 1115 ntBASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 RPL17P17-201ENST00000419491 557 ntBASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 AC092647.1-201ENST00000420654 287 ntBASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 GAPDHP51-201ENST00000426454 1000 ntBASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 NPM1P24-201ENST00000428039 894 ntBASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 MTND6P12-201ENST00000428247 522 ntBASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 ANKRD54P1-201ENST00000433115 471 ntBASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 GAPDHP33-201ENST00000443168 1013 ntBASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 RPL31P15-201ENST00000449770 338 ntBASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 PPIAP27-201ENST00000453800 265 ntBASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 AC007998.1-201ENST00000474156 672 ntBASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 RN7SL273P-201ENST00000481561 299 ntBASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 VPS26AP1-201ENST00000483197 979 ntBASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 RPL34P33-201ENST00000486062 334 ntBASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 AC066616.1-201ENST00000486795 413 ntBASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 ATG10-208ENST00000513634 618 ntTSL 2 BASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 RNU6-1308P-201ENST00000516817 103 ntBASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 AC087808.1-201ENST00000520501 361 ntBASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 OTX2-203ENST00000554559 715 ntTSL 5 BASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 AL138976.2-201ENST00000563989 694 ntBASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 NPIPB1P-202ENST00000588786 828 ntBASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 SNORD96A-201ENST00000606577 79 ntBASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 PART1_1.1-201ENST00000611761 217 ntBASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 Xist_exon4.1-201ENST00000615964 126 ntBASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 MIR6826-201ENST00000617808 98 ntBASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 AC099667.1-201ENST00000624222 469 ntBASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 AC009237.3-203ENST00000442128 3551 ntBASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC8.17□□□□□ -1.1
ZC3H4Q9UPT8 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
ZC3H4Q9UPT8 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC8.16□□□□□ -1.1
ZC3H4Q9UPT8 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
ZC3H4Q9UPT8 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC8.16□□□□□ -1.1
ZC3H4Q9UPT8 CD86-209ENST00000493101 1572 ntTSL 2 BASIC8.16□□□□□ -1.1
ZC3H4Q9UPT8 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC8.16□□□□□ -1.1
ZC3H4Q9UPT8 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC8.16□□□□□ -1.1
ZC3H4Q9UPT8 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
ZC3H4Q9UPT8 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
ZC3H4Q9UPT8 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
ZC3H4Q9UPT8 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC8.16□□□□□ -1.1
ZC3H4Q9UPT8 LOXHD1-201ENST00000300591 3970 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
ZC3H4Q9UPT8 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
ZC3H4Q9UPT8 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
ZC3H4Q9UPT8 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
ZC3H4Q9UPT8 RNA5SP284-201ENST00000384547 118 ntBASIC8.16□□□□□ -1.1
ZC3H4Q9UPT8 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
ZC3H4Q9UPT8 RN7SKP285-201ENST00000410137 318 ntBASIC8.16□□□□□ -1.1
ZC3H4Q9UPT8 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC8.16□□□□□ -1.1
ZC3H4Q9UPT8 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC8.16□□□□□ -1.1
ZC3H4Q9UPT8 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC8.16□□□□□ -1.1
ZC3H4Q9UPT8 BX510359.3-201ENST00000422168 306 ntBASIC8.16□□□□□ -1.1
ZC3H4Q9UPT8 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC8.16□□□□□ -1.1
ZC3H4Q9UPT8 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC8.16□□□□□ -1.1
ZC3H4Q9UPT8 AC092427.1-201ENST00000439177 601 ntBASIC8.16□□□□□ -1.1
ZC3H4Q9UPT8 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC8.16□□□□□ -1.1
ZC3H4Q9UPT8 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC8.16□□□□□ -1.1
ZC3H4Q9UPT8 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC8.16□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms