Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 TMBIM7P-201ENST00000418074 855 ntBASIC4.75□□□□□ -1.65
VPS29Q9UBQ0 OR2AH1P-201ENST00000425717 928 ntBASIC4.75□□□□□ -1.65
VPS29Q9UBQ0 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.75□□□□□ -1.65
VPS29Q9UBQ0 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.75□□□□□ -1.65
VPS29Q9UBQ0 AC092162.1-201ENST00000432828 434 ntBASIC4.75□□□□□ -1.65
VPS29Q9UBQ0 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.75□□□□□ -1.65
VPS29Q9UBQ0 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
VPS29Q9UBQ0 NDUFA5P8-201ENST00000449019 346 ntBASIC4.75□□□□□ -1.65
VPS29Q9UBQ0 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.75□□□□□ -1.65
VPS29Q9UBQ0 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.75□□□□□ -1.65
VPS29Q9UBQ0 RN7SL222P-201ENST00000476452 299 ntBASIC4.75□□□□□ -1.65
VPS29Q9UBQ0 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.75□□□□□ -1.65
VPS29Q9UBQ0 Y_RNA.719-201ENST00000517156 106 ntBASIC4.75□□□□□ -1.65
VPS29Q9UBQ0 OR8A2P-201ENST00000528631 952 ntBASIC4.75□□□□□ -1.65
VPS29Q9UBQ0 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
VPS29Q9UBQ0 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.75□□□□□ -1.65
VPS29Q9UBQ0 EIF1P5-201ENST00000585002 234 ntBASIC4.75□□□□□ -1.65
VPS29Q9UBQ0 AC005377.1-201ENST00000605126 456 ntBASIC4.75□□□□□ -1.65
VPS29Q9UBQ0 AL451049.1-201ENST00000608672 497 ntBASIC4.75□□□□□ -1.65
VPS29Q9UBQ0 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.75□□□□□ -1.65
VPS29Q9UBQ0 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.75□□□□□ -1.65
VPS29Q9UBQ0 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.75□□□□□ -1.65
VPS29Q9UBQ0 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VPS29Q9UBQ0 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
VPS29Q9UBQ0 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
VPS29Q9UBQ0 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VPS29Q9UBQ0 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.75□□□□□ -1.65
VPS29Q9UBQ0 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
VPS29Q9UBQ0 CA1-225ENST00000626824 2405 ntTSL 5 BASIC4.75□□□□□ -1.65
VPS29Q9UBQ0 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.75□□□□□ -1.65
VPS29Q9UBQ0 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VPS29Q9UBQ0 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.75□□□□□ -1.65
VPS29Q9UBQ0 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
VPS29Q9UBQ0 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.75□□□□□ -1.65
VPS29Q9UBQ0 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VPS29Q9UBQ0 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC4.75□□□□□ -1.65
VPS29Q9UBQ0 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
VPS29Q9UBQ0 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
VPS29Q9UBQ0 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
VPS29Q9UBQ0 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.74□□□□□ -1.65
VPS29Q9UBQ0 AC025574.1-201ENST00000554784 1653 ntBASIC4.74□□□□□ -1.65
VPS29Q9UBQ0 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.74□□□□□ -1.65
VPS29Q9UBQ0 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
VPS29Q9UBQ0 AC107068.1-201ENST00000563286 4218 ntBASIC4.74□□□□□ -1.65
VPS29Q9UBQ0 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
VPS29Q9UBQ0 AC011503.2-201ENST00000594230 1500 ntBASIC4.74□□□□□ -1.65
VPS29Q9UBQ0 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.74□□□□□ -1.65
VPS29Q9UBQ0 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
VPS29Q9UBQ0 RNU6-249P-201ENST00000363016 102 ntBASIC4.74□□□□□ -1.65
VPS29Q9UBQ0 AC079355.1-201ENST00000421770 223 ntBASIC4.74□□□□□ -1.65
VPS29Q9UBQ0 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC4.74□□□□□ -1.65
VPS29Q9UBQ0 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.74□□□□□ -1.65
VPS29Q9UBQ0 SCAND3P1-201ENST00000439854 1060 ntBASIC4.74□□□□□ -1.65
VPS29Q9UBQ0 CNOT7P2-201ENST00000441051 832 ntBASIC4.74□□□□□ -1.65
VPS29Q9UBQ0 RPL34P20-201ENST00000442771 351 ntBASIC4.74□□□□□ -1.65
VPS29Q9UBQ0 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC4.74□□□□□ -1.65
VPS29Q9UBQ0 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.74□□□□□ -1.65
VPS29Q9UBQ0 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.74□□□□□ -1.65
VPS29Q9UBQ0 RPS18P6-201ENST00000476880 458 ntBASIC4.74□□□□□ -1.65
VPS29Q9UBQ0 OR2A3P-201ENST00000493774 953 ntBASIC4.74□□□□□ -1.65
VPS29Q9UBQ0 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.74□□□□□ -1.65
VPS29Q9UBQ0 HIGD1AP14-201ENST00000507617 282 ntBASIC4.74□□□□□ -1.65
VPS29Q9UBQ0 RNA5SP303-201ENST00000516192 130 ntBASIC4.74□□□□□ -1.65
VPS29Q9UBQ0 RNA5SP43-201ENST00000516559 110 ntBASIC4.74□□□□□ -1.65
VPS29Q9UBQ0 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.74□□□□□ -1.65
VPS29Q9UBQ0 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.74□□□□□ -1.65
VPS29Q9UBQ0 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.74□□□□□ -1.65
VPS29Q9UBQ0 AC022832.1-201ENST00000530718 645 ntBASIC4.74□□□□□ -1.65
VPS29Q9UBQ0 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.74□□□□□ -1.65
VPS29Q9UBQ0 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
VPS29Q9UBQ0 OR11J2P-201ENST00000555298 907 ntBASIC4.74□□□□□ -1.65
VPS29Q9UBQ0 TVP23CP2-201ENST00000571473 623 ntBASIC4.74□□□□□ -1.65
VPS29Q9UBQ0 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.74□□□□□ -1.65
VPS29Q9UBQ0 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC4.74□□□□□ -1.65
VPS29Q9UBQ0 AC022467.1-201ENST00000614738 749 ntBASIC4.74□□□□□ -1.65
VPS29Q9UBQ0 AC019206.1-201ENST00000621938 425 ntBASIC4.74□□□□□ -1.65
VPS29Q9UBQ0 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.74□□□□□ -1.65
VPS29Q9UBQ0 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
VPS29Q9UBQ0 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC4.74□□□□□ -1.65
VPS29Q9UBQ0 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
VPS29Q9UBQ0 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
VPS29Q9UBQ0 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.74□□□□□ -1.65
VPS29Q9UBQ0 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
VPS29Q9UBQ0 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.74□□□□□ -1.65
VPS29Q9UBQ0 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
VPS29Q9UBQ0 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
VPS29Q9UBQ0 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
VPS29Q9UBQ0 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
VPS29Q9UBQ0 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.73□□□□□ -1.65
VPS29Q9UBQ0 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
VPS29Q9UBQ0 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.73□□□□□ -1.65
VPS29Q9UBQ0 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
VPS29Q9UBQ0 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
VPS29Q9UBQ0 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
VPS29Q9UBQ0 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
VPS29Q9UBQ0 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
VPS29Q9UBQ0 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.73□□□□□ -1.65
VPS29Q9UBQ0 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC4.73□□□□□ -1.65
VPS29Q9UBQ0 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.73□□□□□ -1.65
VPS29Q9UBQ0 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms