Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC7.13□□□□□ -1.27
CNTN3Q9P232 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CNTN3Q9P232 AC008957.3-201ENST00000624112 2242 ntBASIC7.13□□□□□ -1.27
CNTN3Q9P232 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
CNTN3Q9P232 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC7.13□□□□□ -1.27
CNTN3Q9P232 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CNTN3Q9P232 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CNTN3Q9P232 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
CNTN3Q9P232 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CNTN3Q9P232 AC012213.2-201ENST00000562917 4597 ntBASIC7.13□□□□□ -1.27
CNTN3Q9P232 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
CNTN3Q9P232 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC7.13□□□□□ -1.27
CNTN3Q9P232 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
CNTN3Q9P232 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CNTN3Q9P232 AC093297.3-201ENST00000607056 2517 ntBASIC7.12□□□□□ -1.27
CNTN3Q9P232 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
CNTN3Q9P232 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CNTN3Q9P232 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC7.12□□□□□ -1.27
CNTN3Q9P232 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC7.12□□□□□ -1.27
CNTN3Q9P232 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC7.12□□□□□ -1.27
CNTN3Q9P232 TEX21P-201ENST00000447107 1476 ntBASIC7.12□□□□□ -1.27
CNTN3Q9P232 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
CNTN3Q9P232 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC7.12□□□□□ -1.27
CNTN3Q9P232 AC107980.1-201ENST00000558671 3355 ntBASIC7.12□□□□□ -1.27
CNTN3Q9P232 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CNTN3Q9P232 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CNTN3Q9P232 AC109315.1-201ENST00000584143 1347 ntBASIC7.12□□□□□ -1.27
CNTN3Q9P232 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC7.12□□□□□ -1.27
CNTN3Q9P232 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC7.12□□□□□ -1.27
CNTN3Q9P232 HMGB1P5-201ENST00000255320 642 ntBASIC7.12□□□□□ -1.27
CNTN3Q9P232 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CNTN3Q9P232 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC7.12□□□□□ -1.27
CNTN3Q9P232 RNU5A-6P-201ENST00000384136 116 ntBASIC7.12□□□□□ -1.27
CNTN3Q9P232 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CNTN3Q9P232 snosnR66.1-201ENST00000391095 99 ntBASIC7.12□□□□□ -1.27
CNTN3Q9P232 RPL5P20-201ENST00000403848 896 ntBASIC7.12□□□□□ -1.27
CNTN3Q9P232 RN7SKP221-201ENST00000410420 301 ntBASIC7.12□□□□□ -1.27
CNTN3Q9P232 RN7SKP56-201ENST00000410513 331 ntBASIC7.12□□□□□ -1.27
CNTN3Q9P232 PIGPP2-201ENST00000411569 458 ntBASIC7.12□□□□□ -1.27
CNTN3Q9P232 RPL21P32-201ENST00000419877 477 ntBASIC7.12□□□□□ -1.27
CNTN3Q9P232 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC7.12□□□□□ -1.27
CNTN3Q9P232 AL139184.1-202ENST00000422303 222 ntBASIC7.12□□□□□ -1.27
CNTN3Q9P232 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC7.12□□□□□ -1.27
CNTN3Q9P232 AC083862.1-201ENST00000427378 1242 ntBASIC7.12□□□□□ -1.27
CNTN3Q9P232 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC7.12□□□□□ -1.27
CNTN3Q9P232 AL050321.1-201ENST00000432363 400 ntBASIC7.12□□□□□ -1.27
CNTN3Q9P232 AC000111.3-201ENST00000433478 193 ntBASIC7.12□□□□□ -1.27
CNTN3Q9P232 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC7.12□□□□□ -1.27
CNTN3Q9P232 AC016908.1-201ENST00000442571 1219 ntBASIC7.12□□□□□ -1.27
CNTN3Q9P232 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC7.12□□□□□ -1.27
CNTN3Q9P232 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC7.12□□□□□ -1.27
CNTN3Q9P232 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC7.12□□□□□ -1.27
CNTN3Q9P232 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC7.12□□□□□ -1.27
CNTN3Q9P232 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC7.12□□□□□ -1.27
CNTN3Q9P232 AC068522.1-201ENST00000482895 345 ntBASIC7.12□□□□□ -1.27
CNTN3Q9P232 AC122718.2-201ENST00000505325 591 ntBASIC7.12□□□□□ -1.27
CNTN3Q9P232 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC7.12□□□□□ -1.27
CNTN3Q9P232 CYP4F27P-201ENST00000514557 494 ntBASIC7.12□□□□□ -1.27
CNTN3Q9P232 RNU6-1225P-201ENST00000516336 65 ntBASIC7.12□□□□□ -1.27
CNTN3Q9P232 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC7.12□□□□□ -1.27
CNTN3Q9P232 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC7.12□□□□□ -1.27
CNTN3Q9P232 CA1-215ENST00000522389 551 ntTSL 3 BASIC7.12□□□□□ -1.27
CNTN3Q9P232 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC7.12□□□□□ -1.27
CNTN3Q9P232 OR4C2P-201ENST00000530855 1064 ntBASIC7.12□□□□□ -1.27
CNTN3Q9P232 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC7.12□□□□□ -1.27
CNTN3Q9P232 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC7.12□□□□□ -1.27
CNTN3Q9P232 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC7.12□□□□□ -1.27
CNTN3Q9P232 SYPL1P2-201ENST00000582878 727 ntBASIC7.12□□□□□ -1.27
CNTN3Q9P232 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC7.12□□□□□ -1.27
CNTN3Q9P232 AL078623.1-201ENST00000602702 907 ntBASIC7.12□□□□□ -1.27
CNTN3Q9P232 RNU4-89P-201ENST00000607443 133 ntBASIC7.12□□□□□ -1.27
CNTN3Q9P232 AC009779.8-202ENST00000607990 932 ntBASIC7.12□□□□□ -1.27
CNTN3Q9P232 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CNTN3Q9P232 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CNTN3Q9P232 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CNTN3Q9P232 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
CNTN3Q9P232 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC7.12□□□□□ -1.27
CNTN3Q9P232 MTND5P26-201ENST00000426018 1752 ntBASIC7.12□□□□□ -1.27
CNTN3Q9P232 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CNTN3Q9P232 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CNTN3Q9P232 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CNTN3Q9P232 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CNTN3Q9P232 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CNTN3Q9P232 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CNTN3Q9P232 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC7.11□□□□□ -1.27
CNTN3Q9P232 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC7.11□□□□□ -1.27
CNTN3Q9P232 AL596244.1-201ENST00000567068 3779 ntBASIC7.11□□□□□ -1.27
CNTN3Q9P232 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
CNTN3Q9P232 CLCA3P-203ENST00000490028 2781 ntBASIC7.11□□□□□ -1.27
CNTN3Q9P232 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC7.11□□□□□ -1.27
CNTN3Q9P232 AC119674.1-213ENST00000641177 1386 ntBASIC7.11□□□□□ -1.27
CNTN3Q9P232 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CNTN3Q9P232 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
CNTN3Q9P232 AL079343.1-201ENST00000572358 1771 ntBASIC7.11□□□□□ -1.27
CNTN3Q9P232 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC7.11□□□□□ -1.27
CNTN3Q9P232 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
CNTN3Q9P232 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CNTN3Q9P232 OR9G4-201ENST00000302957 984 ntBASIC7.11□□□□□ -1.27
CNTN3Q9P232 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CNTN3Q9P232 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms