Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 THAP12P4-201ENST00000528321 2266 ntBASIC9.36□□□□□ -0.91
RTN4Q9NQC3 WDR92-202ENST00000406245 1401 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
RTN4Q9NQC3 AC092326.2-201ENST00000624772 1561 ntBASIC9.36□□□□□ -0.91
RTN4Q9NQC3 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC9.36□□□□□ -0.91
RTN4Q9NQC3 DDAH1-202ENST00000426972 4017 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
RTN4Q9NQC3 LRRC31-204ENST00000523069 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
RTN4Q9NQC3 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
RTN4Q9NQC3 ZKSCAN5-201ENST00000326775 4178 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
RTN4Q9NQC3 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
RTN4Q9NQC3 HPS5-201ENST00000349215 4491 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
RTN4Q9NQC3 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
RTN4Q9NQC3 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
RTN4Q9NQC3 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
RTN4Q9NQC3 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
RTN4Q9NQC3 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC9.35□□□□□ -0.91
RTN4Q9NQC3 AL139384.2-201ENST00000613809 3590 ntBASIC9.35□□□□□ -0.91
RTN4Q9NQC3 SIRPD-202ENST00000381623 1958 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
RTN4Q9NQC3 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
RTN4Q9NQC3 KIAA0040-201ENST00000423313 4564 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
RTN4Q9NQC3 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC9.35□□□□□ -0.91
RTN4Q9NQC3 CPB1-208ENST00000491148 1773 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
RTN4Q9NQC3 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
RTN4Q9NQC3 Y_RNA.142-201ENST00000363491 102 ntBASIC9.35□□□□□ -0.91
RTN4Q9NQC3 RNA5SP74-201ENST00000363538 109 ntBASIC9.35□□□□□ -0.91
RTN4Q9NQC3 MIR146B-201ENST00000365699 73 ntBASIC9.35□□□□□ -0.91
RTN4Q9NQC3 MGST3-202ENST00000367884 716 ntAPPRIS P1 TSL 3 BASIC9.35□□□□□ -0.91
RTN4Q9NQC3 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC9.35□□□□□ -0.91
RTN4Q9NQC3 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
RTN4Q9NQC3 RNU6-606P-201ENST00000384721 111 ntBASIC9.35□□□□□ -0.91
RTN4Q9NQC3 IGLV3-12-201ENST00000390313 356 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
RTN4Q9NQC3 RNU6-278P-201ENST00000390945 109 ntBASIC9.35□□□□□ -0.91
RTN4Q9NQC3 AC005005.1-201ENST00000397595 682 ntBASIC9.35□□□□□ -0.91
RTN4Q9NQC3 HNRNPCP2-201ENST00000399515 881 ntBASIC9.35□□□□□ -0.91
RTN4Q9NQC3 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC9.35□□□□□ -0.91
RTN4Q9NQC3 RPS20P15-201ENST00000412792 311 ntBASIC9.35□□□□□ -0.91
RTN4Q9NQC3 TRGVA-201ENST00000413819 285 ntBASIC9.35□□□□□ -0.91
RTN4Q9NQC3 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC9.35□□□□□ -0.91
RTN4Q9NQC3 SDCBPP3-201ENST00000419629 891 ntBASIC9.35□□□□□ -0.91
RTN4Q9NQC3 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC9.35□□□□□ -0.91
RTN4Q9NQC3 LINC00630-202ENST00000420471 838 ntTSL 3 BASIC9.35□□□□□ -0.91
RTN4Q9NQC3 AC104170.1-202ENST00000426017 362 ntTSL 3 BASIC9.35□□□□□ -0.91
RTN4Q9NQC3 AC008065.1-201ENST00000428525 348 ntBASIC9.35□□□□□ -0.91
RTN4Q9NQC3 AC244102.1-201ENST00000437309 848 ntTSL 3 BASIC9.35□□□□□ -0.91
RTN4Q9NQC3 SNRPG-204ENST00000438261 515 ntTSL 2 BASIC9.35□□□□□ -0.91
RTN4Q9NQC3 AC011193.1-202ENST00000441287 323 ntTSL 3 BASIC9.35□□□□□ -0.91
RTN4Q9NQC3 AL356133.1-201ENST00000444762 372 ntBASIC9.35□□□□□ -0.91
RTN4Q9NQC3 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC9.35□□□□□ -0.91
RTN4Q9NQC3 AC006463.1-201ENST00000445929 232 ntBASIC9.35□□□□□ -0.91
RTN4Q9NQC3 AL606804.1-202ENST00000446347 481 ntTSL 2 BASIC9.35□□□□□ -0.91
RTN4Q9NQC3 EIF4A1P6-201ENST00000448133 1210 ntBASIC9.35□□□□□ -0.91
RTN4Q9NQC3 AL353194.1-201ENST00000451507 441 ntTSL 2 BASIC9.35□□□□□ -0.91
RTN4Q9NQC3 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC9.35□□□□□ -0.91
RTN4Q9NQC3 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
RTN4Q9NQC3 RN7SL659P-201ENST00000483093 299 ntBASIC9.35□□□□□ -0.91
RTN4Q9NQC3 RPS10P16-201ENST00000483812 496 ntBASIC9.35□□□□□ -0.91
RTN4Q9NQC3 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC9.35□□□□□ -0.91
RTN4Q9NQC3 TECRP1-201ENST00000513307 445 ntBASIC9.35□□□□□ -0.91
RTN4Q9NQC3 LINC00499-204ENST00000515282 579 ntTSL 5 BASIC9.35□□□□□ -0.91
RTN4Q9NQC3 CPEB4-209ENST00000522336 1551 ntTSL 5 BASIC9.35□□□□□ -0.91
RTN4Q9NQC3 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC9.35□□□□□ -0.91
RTN4Q9NQC3 AC122685.1-202ENST00000556750 555 ntTSL 2 BASIC9.35□□□□□ -0.91
RTN4Q9NQC3 TEX46-202ENST00000566855 510 ntAPPRIS P2 TSL 2 BASIC9.35□□□□□ -0.91
RTN4Q9NQC3 RN7SL474P-201ENST00000583485 301 ntBASIC9.35□□□□□ -0.91
RTN4Q9NQC3 AC091810.1-201ENST00000603131 325 ntBASIC9.35□□□□□ -0.91
RTN4Q9NQC3 AC004908.2-201ENST00000609090 574 ntBASIC9.35□□□□□ -0.91
RTN4Q9NQC3 AL391903.2-201ENST00000614532 247 ntBASIC9.35□□□□□ -0.91
RTN4Q9NQC3 YARS-210ENST00000616261 1167 ntTSL 5 BASIC9.35□□□□□ -0.91
RTN4Q9NQC3 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC9.35□□□□□ -0.91
RTN4Q9NQC3 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC9.35□□□□□ -0.91
RTN4Q9NQC3 AP002505.2-201ENST00000623585 696 ntBASIC9.35□□□□□ -0.91
RTN4Q9NQC3 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC9.35□□□□□ -0.91
RTN4Q9NQC3 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC9.35□□□□□ -0.91
RTN4Q9NQC3 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC9.35□□□□□ -0.91
RTN4Q9NQC3 CEACAM6-201ENST00000199764 2700 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
RTN4Q9NQC3 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
RTN4Q9NQC3 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC9.35□□□□□ -0.91
RTN4Q9NQC3 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
RTN4Q9NQC3 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
RTN4Q9NQC3 LAMB4-202ENST00000388781 5858 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
RTN4Q9NQC3 MAPK10-296ENST00000641283 2826 ntAPPRIS P2 BASIC9.35□□□□□ -0.91
RTN4Q9NQC3 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
RTN4Q9NQC3 RGS17-201ENST00000206262 1636 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
RTN4Q9NQC3 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC9.34□□□□□ -0.91
RTN4Q9NQC3 HIST1H4E-201ENST00000615164 1487 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
RTN4Q9NQC3 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
RTN4Q9NQC3 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
RTN4Q9NQC3 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
RTN4Q9NQC3 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
RTN4Q9NQC3 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
RTN4Q9NQC3 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
RTN4Q9NQC3 GART-201ENST00000361093 2149 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
RTN4Q9NQC3 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
RTN4Q9NQC3 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
RTN4Q9NQC3 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
RTN4Q9NQC3 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC9.34□□□□□ -0.91
RTN4Q9NQC3 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC9.34□□□□□ -0.91
RTN4Q9NQC3 AL731556.1-201ENST00000394628 3711 ntBASIC9.34□□□□□ -0.91
RTN4Q9NQC3 DOCK11-202ENST00000276204 6664 ntAPPRIS ALT1 TSL 5 BASIC9.34□□□□□ -0.91
RTN4Q9NQC3 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC9.34□□□□□ -0.91
RTN4Q9NQC3 Z98751.1-201ENST00000413827 381 ntBASIC9.34□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms