Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.46□□□□□ -1.7
KIAA1549Q9HCM3 MIR6758-201ENST00000620653 63 ntBASIC4.46□□□□□ -1.7
KIAA1549Q9HCM3 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.46□□□□□ -1.7
KIAA1549Q9HCM3 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.46□□□□□ -1.7
KIAA1549Q9HCM3 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
KIAA1549Q9HCM3 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
KIAA1549Q9HCM3 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
KIAA1549Q9HCM3 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
KIAA1549Q9HCM3 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.46□□□□□ -1.7
KIAA1549Q9HCM3 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.46□□□□□ -1.7
KIAA1549Q9HCM3 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
KIAA1549Q9HCM3 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.46□□□□□ -1.7
KIAA1549Q9HCM3 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
KIAA1549Q9HCM3 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.46□□□□□ -1.7
KIAA1549Q9HCM3 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
KIAA1549Q9HCM3 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
KIAA1549Q9HCM3 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
KIAA1549Q9HCM3 FABP12P1-201ENST00000401911 322 ntBASIC4.45□□□□□ -1.7
KIAA1549Q9HCM3 RN7SKP114-201ENST00000410327 279 ntBASIC4.45□□□□□ -1.7
KIAA1549Q9HCM3 CHEK2P3-201ENST00000416118 248 ntBASIC4.45□□□□□ -1.7
KIAA1549Q9HCM3 HMGB1P32-201ENST00000425971 565 ntBASIC4.45□□□□□ -1.7
KIAA1549Q9HCM3 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
KIAA1549Q9HCM3 CBX1P2-201ENST00000453841 458 ntBASIC4.45□□□□□ -1.7
KIAA1549Q9HCM3 SETP4-201ENST00000455717 868 ntBASIC4.45□□□□□ -1.7
KIAA1549Q9HCM3 AC063943.1-201ENST00000465434 453 ntBASIC4.45□□□□□ -1.7
KIAA1549Q9HCM3 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.45□□□□□ -1.7
KIAA1549Q9HCM3 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.45□□□□□ -1.7
KIAA1549Q9HCM3 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.45□□□□□ -1.7
KIAA1549Q9HCM3 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.45□□□□□ -1.7
KIAA1549Q9HCM3 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC4.45□□□□□ -1.7
KIAA1549Q9HCM3 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.45□□□□□ -1.7
KIAA1549Q9HCM3 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC4.45□□□□□ -1.7
KIAA1549Q9HCM3 MIR6798-201ENST00000612887 67 ntBASIC4.45□□□□□ -1.7
KIAA1549Q9HCM3 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
KIAA1549Q9HCM3 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC4.45□□□□□ -1.7
KIAA1549Q9HCM3 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.45□□□□□ -1.7
KIAA1549Q9HCM3 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
KIAA1549Q9HCM3 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
KIAA1549Q9HCM3 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.45□□□□□ -1.7
KIAA1549Q9HCM3 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
KIAA1549Q9HCM3 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.45□□□□□ -1.7
KIAA1549Q9HCM3 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
KIAA1549Q9HCM3 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
KIAA1549Q9HCM3 RNA5SP191-201ENST00000362585 102 ntBASIC4.45□□□□□ -1.7
KIAA1549Q9HCM3 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
KIAA1549Q9HCM3 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.45□□□□□ -1.7
KIAA1549Q9HCM3 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.45□□□□□ -1.7
KIAA1549Q9HCM3 SLC25A18P1-201ENST00000449385 454 ntBASIC4.45□□□□□ -1.7
KIAA1549Q9HCM3 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.45□□□□□ -1.7
KIAA1549Q9HCM3 HIGD1AP5-201ENST00000529959 259 ntBASIC4.45□□□□□ -1.7
KIAA1549Q9HCM3 AC008033.2-201ENST00000542626 177 ntBASIC4.45□□□□□ -1.7
KIAA1549Q9HCM3 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.45□□□□□ -1.7
KIAA1549Q9HCM3 EIF1P5-201ENST00000585002 234 ntBASIC4.45□□□□□ -1.7
KIAA1549Q9HCM3 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.45□□□□□ -1.7
KIAA1549Q9HCM3 AC018695.5-201ENST00000605872 315 ntBASIC4.45□□□□□ -1.7
KIAA1549Q9HCM3 AL022401.1-201ENST00000619498 108 ntBASIC4.45□□□□□ -1.7
KIAA1549Q9HCM3 MIR7641-1-201ENST00000627518 61 ntBASIC4.45□□□□□ -1.7
KIAA1549Q9HCM3 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.45□□□□□ -1.7
KIAA1549Q9HCM3 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
KIAA1549Q9HCM3 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.45□□□□□ -1.7
KIAA1549Q9HCM3 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
KIAA1549Q9HCM3 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
KIAA1549Q9HCM3 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC4.45□□□□□ -1.7
KIAA1549Q9HCM3 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.45□□□□□ -1.7
KIAA1549Q9HCM3 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
KIAA1549Q9HCM3 SAMMSON-226ENST00000642089 1582 ntBASIC4.44□□□□□ -1.7
KIAA1549Q9HCM3 AL590240.1-201ENST00000334118 313 ntBASIC4.44□□□□□ -1.7
KIAA1549Q9HCM3 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
KIAA1549Q9HCM3 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
KIAA1549Q9HCM3 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.44□□□□□ -1.7
KIAA1549Q9HCM3 RNA5SP113-201ENST00000410486 84 ntBASIC4.44□□□□□ -1.7
KIAA1549Q9HCM3 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.44□□□□□ -1.7
KIAA1549Q9HCM3 AL590139.1-201ENST00000416267 400 ntBASIC4.44□□□□□ -1.7
KIAA1549Q9HCM3 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.44□□□□□ -1.7
KIAA1549Q9HCM3 AC004074.1-201ENST00000421810 1063 ntBASIC4.44□□□□□ -1.7
KIAA1549Q9HCM3 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.44□□□□□ -1.7
KIAA1549Q9HCM3 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.44□□□□□ -1.7
KIAA1549Q9HCM3 AC009238.2-201ENST00000431026 355 ntBASIC4.44□□□□□ -1.7
KIAA1549Q9HCM3 AC073648.4-201ENST00000442655 781 ntBASIC4.44□□□□□ -1.7
KIAA1549Q9HCM3 RPL36AP15-201ENST00000444514 266 ntBASIC4.44□□□□□ -1.7
KIAA1549Q9HCM3 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.44□□□□□ -1.7
KIAA1549Q9HCM3 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.44□□□□□ -1.7
KIAA1549Q9HCM3 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.44□□□□□ -1.7
KIAA1549Q9HCM3 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.44□□□□□ -1.7
KIAA1549Q9HCM3 AC100784.1-201ENST00000522790 310 ntBASIC4.44□□□□□ -1.7
KIAA1549Q9HCM3 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.44□□□□□ -1.7
KIAA1549Q9HCM3 CYCSP40-201ENST00000575927 294 ntBASIC4.44□□□□□ -1.7
KIAA1549Q9HCM3 AC068790.7-201ENST00000602347 528 ntBASIC4.44□□□□□ -1.7
KIAA1549Q9HCM3 AL391358.1-201ENST00000605342 190 ntBASIC4.44□□□□□ -1.7
KIAA1549Q9HCM3 AC015914.2-201ENST00000618167 288 ntBASIC4.44□□□□□ -1.7
KIAA1549Q9HCM3 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.44□□□□□ -1.7
KIAA1549Q9HCM3 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
KIAA1549Q9HCM3 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
KIAA1549Q9HCM3 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.44□□□□□ -1.7
KIAA1549Q9HCM3 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.44□□□□□ -1.7
KIAA1549Q9HCM3 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
KIAA1549Q9HCM3 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
KIAA1549Q9HCM3 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
KIAA1549Q9HCM3 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC4.44□□□□□ -1.7
KIAA1549Q9HCM3 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms