Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC091868.1-201ENST00000508746 304 ntBASIC8.07□□□□□ -1.12
IFT140Q96RY7 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC8.07□□□□□ -1.12
IFT140Q96RY7 AC025884.1-201ENST00000556034 378 ntBASIC8.07□□□□□ -1.12
IFT140Q96RY7 AL049839.1-201ENST00000556151 657 ntBASIC8.07□□□□□ -1.12
IFT140Q96RY7 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC8.07□□□□□ -1.12
IFT140Q96RY7 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC8.07□□□□□ -1.12
IFT140Q96RY7 AL591034.3-201ENST00000605511 685 ntBASIC8.07□□□□□ -1.12
IFT140Q96RY7 AP000843.1-201ENST00000624880 701 ntBASIC8.07□□□□□ -1.12
IFT140Q96RY7 AC112200.1-201ENST00000625015 234 ntBASIC8.07□□□□□ -1.12
IFT140Q96RY7 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
IFT140Q96RY7 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC8.07□□□□□ -1.12
IFT140Q96RY7 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
IFT140Q96RY7 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
IFT140Q96RY7 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
IFT140Q96RY7 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC8.07□□□□□ -1.12
IFT140Q96RY7 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC8.07□□□□□ -1.12
IFT140Q96RY7 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
IFT140Q96RY7 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
IFT140Q96RY7 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
IFT140Q96RY7 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
IFT140Q96RY7 AL121657.1-201ENST00000327215 531 ntBASIC8.06□□□□□ -1.12
IFT140Q96RY7 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC8.06□□□□□ -1.12
IFT140Q96RY7 AC009237.10-201ENST00000414112 510 ntBASIC8.06□□□□□ -1.12
IFT140Q96RY7 AC009237.5-201ENST00000414271 501 ntBASIC8.06□□□□□ -1.12
IFT140Q96RY7 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC8.06□□□□□ -1.12
IFT140Q96RY7 SCAND3P1-201ENST00000439854 1060 ntBASIC8.06□□□□□ -1.12
IFT140Q96RY7 RN7SL303P-201ENST00000469773 251 ntBASIC8.06□□□□□ -1.12
IFT140Q96RY7 AC109635.6-201ENST00000525487 1113 ntBASIC8.06□□□□□ -1.12
IFT140Q96RY7 AC130364.2-201ENST00000528639 604 ntBASIC8.06□□□□□ -1.12
IFT140Q96RY7 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC8.06□□□□□ -1.12
IFT140Q96RY7 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
IFT140Q96RY7 AC073365.1-203ENST00000641055 1992 ntBASIC8.06□□□□□ -1.12
IFT140Q96RY7 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
IFT140Q96RY7 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC8.06□□□□□ -1.12
IFT140Q96RY7 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC8.06□□□□□ -1.12
IFT140Q96RY7 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC8.06□□□□□ -1.12
IFT140Q96RY7 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
IFT140Q96RY7 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
IFT140Q96RY7 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC8.06□□□□□ -1.12
IFT140Q96RY7 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
IFT140Q96RY7 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC8.06□□□□□ -1.12
IFT140Q96RY7 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC8.06□□□□□ -1.12
IFT140Q96RY7 RNU1-94P-201ENST00000362627 173 ntBASIC8.06□□□□□ -1.12
IFT140Q96RY7 LINC00993-201ENST00000420453 540 ntBASIC8.06□□□□□ -1.12
IFT140Q96RY7 GLUD1P9-201ENST00000420997 1173 ntBASIC8.06□□□□□ -1.12
IFT140Q96RY7 AL356387.2-201ENST00000422272 243 ntBASIC8.06□□□□□ -1.12
IFT140Q96RY7 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
IFT140Q96RY7 RPL36AP41-201ENST00000493820 306 ntBASIC8.06□□□□□ -1.12
IFT140Q96RY7 RNU1-6P-201ENST00000516290 144 ntBASIC8.06□□□□□ -1.12
IFT140Q96RY7 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC8.06□□□□□ -1.12
IFT140Q96RY7 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC8.06□□□□□ -1.12
IFT140Q96RY7 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC8.06□□□□□ -1.12
IFT140Q96RY7 MIR3158-1-201ENST00000583596 81 ntBASIC8.06□□□□□ -1.12
IFT140Q96RY7 AC022916.3-201ENST00000592961 742 ntBASIC8.06□□□□□ -1.12
IFT140Q96RY7 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC8.06□□□□□ -1.12
IFT140Q96RY7 AL133338.2-201ENST00000604292 736 ntBASIC8.06□□□□□ -1.12
IFT140Q96RY7 MIR492-201ENST00000638676 116 ntBASIC8.06□□□□□ -1.12
IFT140Q96RY7 AC008758.3-201ENST00000507003 1829 ntBASIC8.06□□□□□ -1.12
IFT140Q96RY7 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC8.06□□□□□ -1.12
IFT140Q96RY7 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC8.06□□□□□ -1.12
IFT140Q96RY7 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC8.05□□□□□ -1.12
IFT140Q96RY7 ZFRP1-201ENST00000457579 2970 ntBASIC8.05□□□□□ -1.12
IFT140Q96RY7 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
IFT140Q96RY7 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC8.05□□□□□ -1.12
IFT140Q96RY7 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
IFT140Q96RY7 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
IFT140Q96RY7 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC8.05□□□□□ -1.12
IFT140Q96RY7 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
IFT140Q96RY7 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
IFT140Q96RY7 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC8.05□□□□□ -1.12
IFT140Q96RY7 RPL23AP59-201ENST00000399415 461 ntBASIC8.05□□□□□ -1.12
IFT140Q96RY7 PPIAP31-201ENST00000405422 495 ntBASIC8.05□□□□□ -1.12
IFT140Q96RY7 AC140479.3-201ENST00000418944 1126 ntBASIC8.05□□□□□ -1.12
IFT140Q96RY7 AC090804.1-201ENST00000448870 490 ntBASIC8.05□□□□□ -1.12
IFT140Q96RY7 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
IFT140Q96RY7 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
IFT140Q96RY7 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC8.05□□□□□ -1.12
IFT140Q96RY7 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
IFT140Q96RY7 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
IFT140Q96RY7 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC8.05□□□□□ -1.12
IFT140Q96RY7 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC8.05□□□□□ -1.12
IFT140Q96RY7 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC8.05□□□□□ -1.12
IFT140Q96RY7 AL023881.1-201ENST00000621088 301 ntBASIC8.05□□□□□ -1.12
IFT140Q96RY7 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
IFT140Q96RY7 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
IFT140Q96RY7 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
IFT140Q96RY7 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
IFT140Q96RY7 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
IFT140Q96RY7 RMST-209ENST00000639542 3269 ntTSL 5 BASIC8.04□□□□□ -1.12
IFT140Q96RY7 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
IFT140Q96RY7 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
IFT140Q96RY7 MIR208A-201ENST00000362287 71 ntBASIC8.04□□□□□ -1.12
IFT140Q96RY7 RPS26P8-201ENST00000393490 348 ntBASIC8.04□□□□□ -1.12
IFT140Q96RY7 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC8.04□□□□□ -1.12
IFT140Q96RY7 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC8.04□□□□□ -1.12
IFT140Q96RY7 ACTR3P2-201ENST00000439585 1257 ntBASIC8.04□□□□□ -1.12
IFT140Q96RY7 AC016772.1-201ENST00000444170 1261 ntBASIC8.04□□□□□ -1.12
IFT140Q96RY7 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC8.04□□□□□ -1.12
IFT140Q96RY7 SNX18P1Y-201ENST00000616231 511 ntBASIC8.04□□□□□ -1.12
IFT140Q96RY7 LDHA-225ENST00000625635 141 ntTSL 5 BASIC8.04□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms