Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC4.05□□□□□ -1.76
CSMD1Q96PZ7 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CSMD1Q96PZ7 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CSMD1Q96PZ7 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC4.05□□□□□ -1.76
CSMD1Q96PZ7 TTC28-208ENST00000612946 11274 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
CSMD1Q96PZ7 CCDC162P-202ENST00000368966 6751 ntBASIC4.05□□□□□ -1.76
CSMD1Q96PZ7 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC4.05□□□□□ -1.76
CSMD1Q96PZ7 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CSMD1Q96PZ7 SCN11A-201ENST00000302328 6500 ntAPPRIS P2 TSL 5 BASIC4.05□□□□□ -1.76
CSMD1Q96PZ7 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.05□□□□□ -1.76
CSMD1Q96PZ7 AL161909.1-201ENST00000397390 712 ntBASIC4.05□□□□□ -1.76
CSMD1Q96PZ7 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.05□□□□□ -1.76
CSMD1Q96PZ7 HYALP1-201ENST00000417674 1279 ntBASIC4.05□□□□□ -1.76
CSMD1Q96PZ7 RPS17P8-201ENST00000434525 335 ntBASIC4.05□□□□□ -1.76
CSMD1Q96PZ7 SLC25A18P1-201ENST00000449385 454 ntBASIC4.05□□□□□ -1.76
CSMD1Q96PZ7 AC108064.1-201ENST00000513791 460 ntBASIC4.05□□□□□ -1.76
CSMD1Q96PZ7 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.05□□□□□ -1.76
CSMD1Q96PZ7 AL121932.1-201ENST00000605542 214 ntBASIC4.05□□□□□ -1.76
CSMD1Q96PZ7 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.05□□□□□ -1.76
CSMD1Q96PZ7 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.05□□□□□ -1.76
CSMD1Q96PZ7 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.05□□□□□ -1.76
CSMD1Q96PZ7 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CSMD1Q96PZ7 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CSMD1Q96PZ7 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CSMD1Q96PZ7 PUM1-204ENST00000373747 5375 ntAPPRIS ALT1 TSL 5 BASIC4.05□□□□□ -1.76
CSMD1Q96PZ7 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CSMD1Q96PZ7 PRKG1-204ENST00000373985 6487 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CSMD1Q96PZ7 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CSMD1Q96PZ7 ECM1P2-201ENST00000503354 1577 ntBASIC4.04□□□□□ -1.76
CSMD1Q96PZ7 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CSMD1Q96PZ7 PTMAP5-201ENST00000393073 333 ntBASIC4.04□□□□□ -1.76
CSMD1Q96PZ7 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.04□□□□□ -1.76
CSMD1Q96PZ7 AC091564.1-201ENST00000464563 479 ntBASIC4.04□□□□□ -1.76
CSMD1Q96PZ7 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CSMD1Q96PZ7 OR5D2P-201ENST00000524390 911 ntBASIC4.04□□□□□ -1.76
CSMD1Q96PZ7 AC068993.1-201ENST00000546724 589 ntBASIC4.04□□□□□ -1.76
CSMD1Q96PZ7 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.04□□□□□ -1.76
CSMD1Q96PZ7 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.04□□□□□ -1.76
CSMD1Q96PZ7 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.04□□□□□ -1.76
CSMD1Q96PZ7 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC4.04□□□□□ -1.76
CSMD1Q96PZ7 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC4.04□□□□□ -1.76
CSMD1Q96PZ7 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CSMD1Q96PZ7 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
CSMD1Q96PZ7 AC140134.1-201ENST00000511830 3544 ntBASIC4.04□□□□□ -1.76
CSMD1Q96PZ7 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CSMD1Q96PZ7 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC4.04□□□□□ -1.76
CSMD1Q96PZ7 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
CSMD1Q96PZ7 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
CSMD1Q96PZ7 MAP1A-202ENST00000382031 10553 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
CSMD1Q96PZ7 RNA5SP283-201ENST00000365604 119 ntBASIC4.04□□□□□ -1.76
CSMD1Q96PZ7 RPS26P8-201ENST00000393490 348 ntBASIC4.04□□□□□ -1.76
CSMD1Q96PZ7 DNAJA1P3-201ENST00000399417 1194 ntBASIC4.04□□□□□ -1.76
CSMD1Q96PZ7 AL357515.1-201ENST00000402967 542 ntBASIC4.04□□□□□ -1.76
CSMD1Q96PZ7 HMGB3P5-201ENST00000428894 612 ntBASIC4.04□□□□□ -1.76
CSMD1Q96PZ7 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.04□□□□□ -1.76
CSMD1Q96PZ7 AC015795.1-201ENST00000513669 327 ntBASIC4.04□□□□□ -1.76
CSMD1Q96PZ7 MIR2116-201ENST00000517221 80 ntBASIC4.04□□□□□ -1.76
CSMD1Q96PZ7 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.04□□□□□ -1.76
CSMD1Q96PZ7 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC4.04□□□□□ -1.76
CSMD1Q96PZ7 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.04□□□□□ -1.76
CSMD1Q96PZ7 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CSMD1Q96PZ7 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CSMD1Q96PZ7 DMD-222ENST00000474231 5209 ntTSL 5 BASIC4.04□□□□□ -1.76
CSMD1Q96PZ7 TRIM66-201ENST00000299550 9753 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
CSMD1Q96PZ7 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.04□□□□□ -1.76
CSMD1Q96PZ7 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CSMD1Q96PZ7 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC4.04□□□□□ -1.76
CSMD1Q96PZ7 LSAMP-205ENST00000490035 9446 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CSMD1Q96PZ7 SPATS2L-227ENST00000619961 6115 ntTSL 2 BASIC4.04□□□□□ -1.76
CSMD1Q96PZ7 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
CSMD1Q96PZ7 AC005261.4-201ENST00000600047 1385 ntBASIC4.04□□□□□ -1.76
CSMD1Q96PZ7 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC4.04□□□□□ -1.76
CSMD1Q96PZ7 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CSMD1Q96PZ7 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CSMD1Q96PZ7 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
CSMD1Q96PZ7 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
CSMD1Q96PZ7 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CSMD1Q96PZ7 RNU6-628P-201ENST00000410675 107 ntBASIC4.04□□□□□ -1.76
CSMD1Q96PZ7 RPL23AP26-201ENST00000412728 464 ntBASIC4.04□□□□□ -1.76
CSMD1Q96PZ7 AL590399.2-201ENST00000427536 309 ntBASIC4.04□□□□□ -1.76
CSMD1Q96PZ7 GOT2P5-201ENST00000433995 546 ntBASIC4.04□□□□□ -1.76
CSMD1Q96PZ7 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.04□□□□□ -1.76
CSMD1Q96PZ7 FTH1P21-201ENST00000512179 511 ntBASIC4.04□□□□□ -1.76
CSMD1Q96PZ7 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.04□□□□□ -1.76
CSMD1Q96PZ7 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.04□□□□□ -1.76
CSMD1Q96PZ7 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.04□□□□□ -1.76
CSMD1Q96PZ7 TRPM3-204ENST00000360823 5966 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
CSMD1Q96PZ7 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC4.04□□□□□ -1.76
CSMD1Q96PZ7 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CSMD1Q96PZ7 PLXNA2-201ENST00000367033 11444 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CSMD1Q96PZ7 ZEB2-246ENST00000638128 8932 ntTSL 5 BASIC4.03□□□□□ -1.76
CSMD1Q96PZ7 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC4.03□□□□□ -1.76
CSMD1Q96PZ7 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CSMD1Q96PZ7 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CSMD1Q96PZ7 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CSMD1Q96PZ7 MIR218-2-201ENST00000385006 110 ntBASIC4.03□□□□□ -1.76
CSMD1Q96PZ7 RN7SKP16-201ENST00000410180 299 ntBASIC4.03□□□□□ -1.76
CSMD1Q96PZ7 RNA5SP345-201ENST00000410646 108 ntBASIC4.03□□□□□ -1.76
CSMD1Q96PZ7 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.03□□□□□ -1.76
CSMD1Q96PZ7 AL139095.3-201ENST00000419672 1203 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms