Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
RPRD1AQ96P16 AC069304.1-201ENST00000491593 704 ntBASIC5.3□□□□□ -1.56
RPRD1AQ96P16 RN7SL808P-201ENST00000496066 299 ntBASIC5.3□□□□□ -1.56
RPRD1AQ96P16 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.3□□□□□ -1.56
RPRD1AQ96P16 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.3□□□□□ -1.56
RPRD1AQ96P16 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.3□□□□□ -1.56
RPRD1AQ96P16 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.3□□□□□ -1.56
RPRD1AQ96P16 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.3□□□□□ -1.56
RPRD1AQ96P16 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
RPRD1AQ96P16 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.3□□□□□ -1.56
RPRD1AQ96P16 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.3□□□□□ -1.56
RPRD1AQ96P16 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.3□□□□□ -1.56
RPRD1AQ96P16 AC087763.1-201ENST00000603391 286 ntBASIC5.3□□□□□ -1.56
RPRD1AQ96P16 AC092944.2-201ENST00000605443 889 ntBASIC5.3□□□□□ -1.56
RPRD1AQ96P16 AL445222.1-201ENST00000607259 628 ntBASIC5.3□□□□□ -1.56
RPRD1AQ96P16 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC5.3□□□□□ -1.56
RPRD1AQ96P16 AC006840.1-201ENST00000623069 542 ntBASIC5.3□□□□□ -1.56
RPRD1AQ96P16 AP003400.2-201ENST00000624036 666 ntBASIC5.3□□□□□ -1.56
RPRD1AQ96P16 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC5.3□□□□□ -1.56
RPRD1AQ96P16 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RPRD1AQ96P16 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.3□□□□□ -1.56
RPRD1AQ96P16 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
RPRD1AQ96P16 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
RPRD1AQ96P16 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
RPRD1AQ96P16 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
RPRD1AQ96P16 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RPRD1AQ96P16 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.3□□□□□ -1.56
RPRD1AQ96P16 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RPRD1AQ96P16 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.29□□□□□ -1.56
RPRD1AQ96P16 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.29□□□□□ -1.56
RPRD1AQ96P16 Z95331.1-201ENST00000623075 23112 ntBASIC5.29□□□□□ -1.56
RPRD1AQ96P16 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
RPRD1AQ96P16 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RPRD1AQ96P16 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RPRD1AQ96P16 AP001029.2-203ENST00000589795 4910 ntBASIC5.29□□□□□ -1.56
RPRD1AQ96P16 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
RPRD1AQ96P16 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
RPRD1AQ96P16 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RPRD1AQ96P16 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RPRD1AQ96P16 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RPRD1AQ96P16 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
RPRD1AQ96P16 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.29□□□□□ -1.56
RPRD1AQ96P16 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.29□□□□□ -1.56
RPRD1AQ96P16 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.29□□□□□ -1.56
RPRD1AQ96P16 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.29□□□□□ -1.56
RPRD1AQ96P16 AL136231.1-201ENST00000429407 730 ntBASIC5.29□□□□□ -1.56
RPRD1AQ96P16 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.29□□□□□ -1.56
RPRD1AQ96P16 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.29□□□□□ -1.56
RPRD1AQ96P16 AC092647.3-201ENST00000443044 633 ntBASIC5.29□□□□□ -1.56
RPRD1AQ96P16 CEACAMP7-201ENST00000444105 496 ntBASIC5.29□□□□□ -1.56
RPRD1AQ96P16 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.29□□□□□ -1.56
RPRD1AQ96P16 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.29□□□□□ -1.56
RPRD1AQ96P16 BX842559.2-201ENST00000451418 605 ntBASIC5.29□□□□□ -1.56
RPRD1AQ96P16 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.29□□□□□ -1.56
RPRD1AQ96P16 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.29□□□□□ -1.56
RPRD1AQ96P16 OR9N1P-201ENST00000491296 333 ntBASIC5.29□□□□□ -1.56
RPRD1AQ96P16 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.29□□□□□ -1.56
RPRD1AQ96P16 AC004980.4-201ENST00000513375 203 ntBASIC5.29□□□□□ -1.56
RPRD1AQ96P16 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.29□□□□□ -1.56
RPRD1AQ96P16 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.29□□□□□ -1.56
RPRD1AQ96P16 AC013701.1-201ENST00000522657 465 ntBASIC5.29□□□□□ -1.56
RPRD1AQ96P16 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.29□□□□□ -1.56
RPRD1AQ96P16 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.29□□□□□ -1.56
RPRD1AQ96P16 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RPRD1AQ96P16 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.29□□□□□ -1.56
RPRD1AQ96P16 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC5.29□□□□□ -1.56
RPRD1AQ96P16 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.29□□□□□ -1.56
RPRD1AQ96P16 AL021707.7-201ENST00000607991 416 ntBASIC5.29□□□□□ -1.56
RPRD1AQ96P16 AC037198.3-201ENST00000616754 526 ntBASIC5.29□□□□□ -1.56
RPRD1AQ96P16 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.29□□□□□ -1.56
RPRD1AQ96P16 AP002799.1-201ENST00000623552 423 ntBASIC5.29□□□□□ -1.56
RPRD1AQ96P16 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
RPRD1AQ96P16 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
RPRD1AQ96P16 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.29□□□□□ -1.56
RPRD1AQ96P16 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
RPRD1AQ96P16 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RPRD1AQ96P16 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RPRD1AQ96P16 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.29□□□□□ -1.56
RPRD1AQ96P16 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.29□□□□□ -1.56
RPRD1AQ96P16 HSPA8P18-201ENST00000439846 1928 ntBASIC5.29□□□□□ -1.56
RPRD1AQ96P16 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
RPRD1AQ96P16 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
RPRD1AQ96P16 PCAT14-202ENST00000627127 3935 ntBASIC5.29□□□□□ -1.56
RPRD1AQ96P16 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
RPRD1AQ96P16 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.28□□□□□ -1.56
RPRD1AQ96P16 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.28□□□□□ -1.56
RPRD1AQ96P16 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.28□□□□□ -1.56
RPRD1AQ96P16 RNA5SP305-201ENST00000362665 119 ntBASIC5.28□□□□□ -1.56
RPRD1AQ96P16 RN7SKP113-201ENST00000363891 295 ntBASIC5.28□□□□□ -1.56
RPRD1AQ96P16 SNORA74A-201ENST00000364089 198 ntBASIC5.28□□□□□ -1.56
RPRD1AQ96P16 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.28□□□□□ -1.56
RPRD1AQ96P16 AL390316.1-201ENST00000406279 553 ntBASIC5.28□□□□□ -1.56
RPRD1AQ96P16 MTND4LP21-201ENST00000415303 295 ntBASIC5.28□□□□□ -1.56
RPRD1AQ96P16 DDX39BP1-205ENST00000422507 192 ntBASIC5.28□□□□□ -1.56
RPRD1AQ96P16 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.28□□□□□ -1.56
RPRD1AQ96P16 CBX1P2-201ENST00000453841 458 ntBASIC5.28□□□□□ -1.56
RPRD1AQ96P16 AC091180.1-201ENST00000462104 372 ntBASIC5.28□□□□□ -1.56
RPRD1AQ96P16 RN7SL443P-201ENST00000464331 290 ntBASIC5.28□□□□□ -1.56
RPRD1AQ96P16 HMGN2P25-201ENST00000486956 268 ntBASIC5.28□□□□□ -1.56
RPRD1AQ96P16 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms