Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 IGHV5-78-201ENST00000450948 295 ntBASIC5.31□□□□□ -1.56
CCDC42Q96M95 RPS21P4-201ENST00000487122 248 ntBASIC5.31□□□□□ -1.56
CCDC42Q96M95 AC026688.1-201ENST00000520639 1168 ntBASIC5.31□□□□□ -1.56
CCDC42Q96M95 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.31□□□□□ -1.56
CCDC42Q96M95 OR4A46P-201ENST00000527255 933 ntBASIC5.31□□□□□ -1.56
CCDC42Q96M95 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.31□□□□□ -1.56
CCDC42Q96M95 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC42Q96M95 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.31□□□□□ -1.56
CCDC42Q96M95 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC42Q96M95 AC107993.1-201ENST00000591343 684 ntBASIC5.31□□□□□ -1.56
CCDC42Q96M95 OR8G7P-201ENST00000616658 848 ntBASIC5.31□□□□□ -1.56
CCDC42Q96M95 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.31□□□□□ -1.56
CCDC42Q96M95 AL357153.4-201ENST00000620487 1016 ntBASIC5.31□□□□□ -1.56
CCDC42Q96M95 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC42Q96M95 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC42Q96M95 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC42Q96M95 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.31□□□□□ -1.56
CCDC42Q96M95 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC42Q96M95 AL133268.1-201ENST00000405676 1401 ntBASIC5.31□□□□□ -1.56
CCDC42Q96M95 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC42Q96M95 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC42Q96M95 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC42Q96M95 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC42Q96M95 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC42Q96M95 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC42Q96M95 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC42Q96M95 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC42Q96M95 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC42Q96M95 RNU1-43P-201ENST00000365052 165 ntBASIC5.3□□□□□ -1.56
CCDC42Q96M95 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC42Q96M95 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CCDC42Q96M95 AL512422.1-201ENST00000407033 553 ntBASIC5.3□□□□□ -1.56
CCDC42Q96M95 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.3□□□□□ -1.56
CCDC42Q96M95 RN7SKP126-201ENST00000411143 300 ntBASIC5.3□□□□□ -1.56
CCDC42Q96M95 RNU2-18P-201ENST00000411224 162 ntBASIC5.3□□□□□ -1.56
CCDC42Q96M95 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC42Q96M95 AC012519.1-201ENST00000424588 610 ntBASIC5.3□□□□□ -1.56
CCDC42Q96M95 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC42Q96M95 KNOP1P3-201ENST00000446933 426 ntBASIC5.3□□□□□ -1.56
CCDC42Q96M95 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC42Q96M95 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.3□□□□□ -1.56
CCDC42Q96M95 OTX2P1-201ENST00000450956 354 ntBASIC5.3□□□□□ -1.56
CCDC42Q96M95 AL445433.1-201ENST00000457507 257 ntBASIC5.3□□□□□ -1.56
CCDC42Q96M95 RPSAP39-201ENST00000467439 883 ntBASIC5.3□□□□□ -1.56
CCDC42Q96M95 RPL7P39-201ENST00000481157 744 ntBASIC5.3□□□□□ -1.56
CCDC42Q96M95 OR2A3P-201ENST00000493774 953 ntBASIC5.3□□□□□ -1.56
CCDC42Q96M95 PGAM1P13-201ENST00000507497 754 ntBASIC5.3□□□□□ -1.56
CCDC42Q96M95 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC42Q96M95 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC42Q96M95 MTATP6P1-201ENST00000514057 681 ntBASIC5.3□□□□□ -1.56
CCDC42Q96M95 RN7SKP260-201ENST00000516907 149 ntBASIC5.3□□□□□ -1.56
CCDC42Q96M95 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.3□□□□□ -1.56
CCDC42Q96M95 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC42Q96M95 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.3□□□□□ -1.56
CCDC42Q96M95 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC42Q96M95 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC5.3□□□□□ -1.56
CCDC42Q96M95 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC42Q96M95 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.3□□□□□ -1.56
CCDC42Q96M95 AC105254.2-201ENST00000603636 436 ntBASIC5.3□□□□□ -1.56
CCDC42Q96M95 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.3□□□□□ -1.56
CCDC42Q96M95 AC097505.1-201ENST00000610199 565 ntBASIC5.3□□□□□ -1.56
CCDC42Q96M95 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC42Q96M95 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC42Q96M95 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC42Q96M95 RBPJP2-201ENST00000618187 1444 ntBASIC5.3□□□□□ -1.56
CCDC42Q96M95 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC42Q96M95 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CCDC42Q96M95 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC42Q96M95 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC42Q96M95 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.29□□□□□ -1.56
CCDC42Q96M95 TTC39DP-201ENST00000416781 1688 ntBASIC5.29□□□□□ -1.56
CCDC42Q96M95 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CCDC42Q96M95 AL136116.2-201ENST00000404020 785 ntBASIC5.29□□□□□ -1.56
CCDC42Q96M95 RN7SKP59-201ENST00000410520 314 ntBASIC5.29□□□□□ -1.56
CCDC42Q96M95 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC42Q96M95 AC092447.2-201ENST00000435487 669 ntBASIC5.29□□□□□ -1.56
CCDC42Q96M95 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.29□□□□□ -1.56
CCDC42Q96M95 SPRYD7P1-201ENST00000443861 570 ntBASIC5.29□□□□□ -1.56
CCDC42Q96M95 AC108751.2-201ENST00000469993 231 ntBASIC5.29□□□□□ -1.56
CCDC42Q96M95 RN7SL717P-201ENST00000478343 297 ntBASIC5.29□□□□□ -1.56
CCDC42Q96M95 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC42Q96M95 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC42Q96M95 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.29□□□□□ -1.56
CCDC42Q96M95 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.29□□□□□ -1.56
CCDC42Q96M95 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.29□□□□□ -1.56
CCDC42Q96M95 AP002373.2-201ENST00000541631 1060 ntBASIC5.29□□□□□ -1.56
CCDC42Q96M95 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC42Q96M95 NMNAT1P1-201ENST00000554095 876 ntBASIC5.29□□□□□ -1.56
CCDC42Q96M95 AC087477.6-201ENST00000559595 843 ntBASIC5.29□□□□□ -1.56
CCDC42Q96M95 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC42Q96M95 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC42Q96M95 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.29□□□□□ -1.56
CCDC42Q96M95 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC42Q96M95 AC079395.2-201ENST00000610982 737 ntBASIC5.29□□□□□ -1.56
CCDC42Q96M95 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC42Q96M95 AC019206.1-201ENST00000621938 425 ntBASIC5.29□□□□□ -1.56
CCDC42Q96M95 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC42Q96M95 AC012414.7-202ENST00000622705 1090 ntBASIC5.29□□□□□ -1.56
CCDC42Q96M95 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC42Q96M95 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms