Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
CDK5RAP3Q96JB5 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CDK5RAP3Q96JB5 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
CDK5RAP3Q96JB5 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CDK5RAP3Q96JB5 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CDK5RAP3Q96JB5 HMGB3P19-201ENST00000403971 560 ntBASIC6.27□□□□□ -1.41
CDK5RAP3Q96JB5 RPL5P19-201ENST00000404228 893 ntBASIC6.27□□□□□ -1.41
CDK5RAP3Q96JB5 RNU2-17P-201ENST00000410290 190 ntBASIC6.27□□□□□ -1.41
CDK5RAP3Q96JB5 AC096533.1-201ENST00000411645 353 ntBASIC6.27□□□□□ -1.41
CDK5RAP3Q96JB5 AC093155.2-201ENST00000420734 937 ntBASIC6.27□□□□□ -1.41
CDK5RAP3Q96JB5 AC241520.1-201ENST00000422654 1099 ntBASIC6.27□□□□□ -1.41
CDK5RAP3Q96JB5 NDUFA5P10-201ENST00000432147 357 ntBASIC6.27□□□□□ -1.41
CDK5RAP3Q96JB5 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC6.27□□□□□ -1.41
CDK5RAP3Q96JB5 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC6.27□□□□□ -1.41
CDK5RAP3Q96JB5 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC6.27□□□□□ -1.41
CDK5RAP3Q96JB5 LINC02210-201ENST00000444561 288 ntBASIC6.27□□□□□ -1.41
CDK5RAP3Q96JB5 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC6.27□□□□□ -1.41
CDK5RAP3Q96JB5 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC6.27□□□□□ -1.41
CDK5RAP3Q96JB5 RPL6P5-201ENST00000445678 828 ntBASIC6.27□□□□□ -1.41
CDK5RAP3Q96JB5 RPL36AP39-201ENST00000445859 318 ntBASIC6.27□□□□□ -1.41
CDK5RAP3Q96JB5 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC6.27□□□□□ -1.41
CDK5RAP3Q96JB5 RFESD-208ENST00000513950 464 ntTSL 5 BASIC6.27□□□□□ -1.41
CDK5RAP3Q96JB5 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.27□□□□□ -1.41
CDK5RAP3Q96JB5 MTND2P32-201ENST00000521584 1038 ntBASIC6.27□□□□□ -1.41
CDK5RAP3Q96JB5 OR5AM1P-201ENST00000532136 1032 ntBASIC6.27□□□□□ -1.41
CDK5RAP3Q96JB5 AC087888.1-201ENST00000550884 1254 ntBASIC6.27□□□□□ -1.41
CDK5RAP3Q96JB5 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC6.27□□□□□ -1.41
CDK5RAP3Q96JB5 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC6.27□□□□□ -1.41
CDK5RAP3Q96JB5 MRPS21P7-201ENST00000566937 238 ntBASIC6.27□□□□□ -1.41
CDK5RAP3Q96JB5 RBM22P12-201ENST00000567098 1255 ntBASIC6.27□□□□□ -1.41
CDK5RAP3Q96JB5 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.27□□□□□ -1.41
CDK5RAP3Q96JB5 AC008521.2-201ENST00000591021 259 ntBASIC6.27□□□□□ -1.41
CDK5RAP3Q96JB5 AC006116.5-201ENST00000591936 559 ntBASIC6.27□□□□□ -1.41
CDK5RAP3Q96JB5 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC6.27□□□□□ -1.41
CDK5RAP3Q96JB5 CDC42EP3P1-201ENST00000601004 764 ntBASIC6.27□□□□□ -1.41
CDK5RAP3Q96JB5 AC027243.2-201ENST00000602530 724 ntBASIC6.27□□□□□ -1.41
CDK5RAP3Q96JB5 AC015982.1-201ENST00000608113 465 ntBASIC6.27□□□□□ -1.41
CDK5RAP3Q96JB5 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC6.27□□□□□ -1.41
CDK5RAP3Q96JB5 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC6.27□□□□□ -1.41
CDK5RAP3Q96JB5 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC6.27□□□□□ -1.41
CDK5RAP3Q96JB5 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC6.27□□□□□ -1.41
CDK5RAP3Q96JB5 AC093849.1-201ENST00000563631 2209 ntBASIC6.27□□□□□ -1.41
CDK5RAP3Q96JB5 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
CDK5RAP3Q96JB5 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CDK5RAP3Q96JB5 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC6.27□□□□□ -1.41
CDK5RAP3Q96JB5 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.27□□□□□ -1.41
CDK5RAP3Q96JB5 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
CDK5RAP3Q96JB5 AC007382.1-201ENST00000624376 2618 ntBASIC6.27□□□□□ -1.41
CDK5RAP3Q96JB5 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CDK5RAP3Q96JB5 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
CDK5RAP3Q96JB5 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 RBPJP2-201ENST00000618187 1444 ntBASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 YES1P1-201ENST00000418510 1628 ntBASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 RNA5SP46-201ENST00000362370 120 ntBASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 RNU1-146P-201ENST00000364015 165 ntBASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 RNU6-468P-201ENST00000384003 109 ntBASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 HMGB1P10-201ENST00000395823 563 ntBASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 HMGB3P7-201ENST00000400214 611 ntBASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 AL445183.3-201ENST00000414168 502 ntBASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 AL158825.1-201ENST00000414735 521 ntBASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 RPL7P56-201ENST00000429441 717 ntBASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 AC138761.5-201ENST00000433967 325 ntBASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 RPL23AP19-201ENST00000436229 369 ntBASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 AC073109.1-201ENST00000445066 978 ntBASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 AL157827.1-201ENST00000447622 132 ntBASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 AL596266.1-201ENST00000448132 400 ntBASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 RPS23P9-201ENST00000448848 438 ntBASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 HSPE1P22-201ENST00000456856 327 ntBASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 RN7SL188P-201ENST00000469842 285 ntBASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 RPS17P11-201ENST00000474297 293 ntBASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 RN7SL284P-201ENST00000498823 275 ntBASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 AC018442.3-201ENST00000523025 183 ntBASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.26□□□□□ -1.41
CDK5RAP3Q96JB5 AL049872.1-201ENST00000556323 322 ntBASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 135.5 ms