Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AC079922.1-201ENST00000443291 359 ntBASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 USP9YP10-201ENST00000454868 628 ntBASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 RNU7-27P-201ENST00000459281 62 ntBASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 RPL7P51-201ENST00000490532 749 ntBASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 USP9YP5-201ENST00000511770 630 ntBASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 CR383658.1-201ENST00000514609 734 ntBASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 AC087373.1-201ENST00000524920 491 ntBASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 NDUFAF4P1-201ENST00000559425 519 ntBASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 AGGF1P7-201ENST00000562369 913 ntBASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 AC009094.1-201ENST00000564443 426 ntBASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 AC090651.1-201ENST00000567865 634 ntBASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 AC107952.2-201ENST00000606048 486 ntBASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 AC017037.3-201ENST00000625016 472 ntBASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 AL354854.1-201ENST00000455940 1363 ntBASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 AL359091.1-201ENST00000449048 1734 ntBASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 SNORA21-201ENST00000362423 132 ntBASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 RNU6-252P-201ENST00000363232 107 ntBASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 AL158050.1-201ENST00000416077 457 ntBASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 AC015977.1-201ENST00000418887 292 ntBASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 DPY19L1P2-201ENST00000426647 915 ntBASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 FO393414.1-201ENST00000428697 1184 ntBASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 AL589823.1-201ENST00000429577 183 ntBASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 OR3D1P-201ENST00000438288 955 ntBASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 AL358794.1-201ENST00000445689 381 ntBASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 AL035551.1-201ENST00000446931 348 ntBASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 ELOCP30-201ENST00000447108 299 ntBASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 PPIAP7-201ENST00000454070 489 ntBASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 MTCO3P16-201ENST00000454456 754 ntBASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 OFD1P7Y-201ENST00000454643 1155 ntBASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 AP002453.1-201ENST00000492327 668 ntBASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 AC134050.1-201ENST00000495088 933 ntBASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 AC104109.1-201ENST00000498563 436 ntBASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 AC118282.2-201ENST00000508739 374 ntBASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 AC090958.1-201ENST00000511122 351 ntBASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 AC013701.1-201ENST00000522657 465 ntBASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 AC018442.3-201ENST00000523025 183 ntBASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 AP000620.1-201ENST00000527147 504 ntBASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 AC027026.1-201ENST00000532323 742 ntBASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 AL356801.1-201ENST00000559320 294 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms