Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 ATP5A1P1-201ENST00000454088 1321 ntBASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 RSRC1-203ENST00000464171 2411 ntTSL 5 BASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 AL359263.1-201ENST00000441188 2796 ntBASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 NELL2-217ENST00000551601 3148 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 Y_RNA.31-201ENST00000362574 102 ntBASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 RN7SKP107-201ENST00000364157 290 ntBASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 DEFB109C-201ENST00000382575 264 ntBASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 DEFB109B-201ENST00000382656 264 ntBASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 CNN3P1-201ENST00000401596 935 ntBASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 SNORA11.3-201ENST00000408471 128 ntBASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 SNRPEP10-201ENST00000420249 274 ntBASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 GTF2IP20-201ENST00000431663 360 ntBASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 ANKRD54P1-201ENST00000433115 471 ntBASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 RPS25P9-201ENST00000435591 252 ntBASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 AL627308.1-201ENST00000435693 821 ntBASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 HMGB1P45-201ENST00000435986 653 ntBASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 AL445991.1-201ENST00000450381 475 ntBASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 RPL23AP8-201ENST00000479812 475 ntBASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 B3GNTL1P1-201ENST00000509174 289 ntBASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 PGAM4P2-201ENST00000512491 721 ntBASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 SCARNA6-201ENST00000515982 265 ntBASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 IGLC4-201ENST00000517690 248 ntBASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 AP005902.2-201ENST00000518393 307 ntBASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 AC116917.1-201ENST00000520558 305 ntBASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 OR6C73P-201ENST00000546432 358 ntBASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 AC005668.1-201ENST00000571142 476 ntBASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 AP001542.2-201ENST00000593141 364 ntBASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 AC104785.1-201ENST00000603220 588 ntBASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 SNORA11.6-201ENST00000619030 128 ntBASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 MIR6823-201ENST00000622118 61 ntBASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 ASCC1-201ENST00000317126 1501 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 AC022507.1-201ENST00000548349 1505 ntBASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 CREM-208ENST00000361599 2170 ntTSL 5 BASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 LINC02250-201ENST00000422117 2491 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 PTK2-240ENST00000522684 4955 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 Y_RNA.47-201ENST00000362697 108 ntBASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 AC245036.1-201ENST00000391727 309 ntBASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 YWHAZP6-201ENST00000399764 738 ntBASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 AL049693.1-201ENST00000402760 611 ntBASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 UQCRHP1-204ENST00000424609 274 ntBASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 AHCYP8-201ENST00000425108 209 ntBASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 OR5AW1P-201ENST00000426334 1006 ntBASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 ETF1P3-201ENST00000430422 1160 ntBASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 SEPHS1P4-201ENST00000446112 1176 ntBASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 AC073415.1-201ENST00000449240 153 ntBASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 AL354714.5-201ENST00000450131 590 ntBASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 BTF3P15-201ENST00000455606 336 ntBASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 AC019084.1-201ENST00000457337 432 ntBASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 RN7SL70P-201ENST00000478322 302 ntBASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 RN7SL143P-201ENST00000496780 297 ntBASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 AC024451.1-201ENST00000508013 779 ntBASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 BRD9P1-201ENST00000529855 560 ntBASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 MELK-208ENST00000536987 2125 ntTSL 2 BASIC7.35□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms