Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AC005868.1-201ENST00000536421 331 ntBASIC4.7□□□□□ -1.66
RFX4Q33E94 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.7□□□□□ -1.66
RFX4Q33E94 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.7□□□□□ -1.66
RFX4Q33E94 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
RFX4Q33E94 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.7□□□□□ -1.66
RFX4Q33E94 AC135626.1-201ENST00000556983 435 ntBASIC4.7□□□□□ -1.66
RFX4Q33E94 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.7□□□□□ -1.66
RFX4Q33E94 RBM22P1-201ENST00000578589 1214 ntBASIC4.7□□□□□ -1.66
RFX4Q33E94 AP005131.7-201ENST00000610087 611 ntBASIC4.7□□□□□ -1.66
RFX4Q33E94 AC073575.2-201ENST00000614212 627 ntBASIC4.7□□□□□ -1.66
RFX4Q33E94 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC4.7□□□□□ -1.66
RFX4Q33E94 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RFX4Q33E94 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RFX4Q33E94 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
RFX4Q33E94 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RFX4Q33E94 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.7□□□□□ -1.66
RFX4Q33E94 AC000123.3-201ENST00000624029 4975 ntBASIC4.7□□□□□ -1.66
RFX4Q33E94 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RFX4Q33E94 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RFX4Q33E94 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
RFX4Q33E94 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
RFX4Q33E94 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
RFX4Q33E94 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RFX4Q33E94 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RFX4Q33E94 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
RFX4Q33E94 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RFX4Q33E94 AP001273.1-201ENST00000624493 3152 ntBASIC4.69□□□□□ -1.66
RFX4Q33E94 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.69□□□□□ -1.66
RFX4Q33E94 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RFX4Q33E94 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RFX4Q33E94 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
RFX4Q33E94 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RFX4Q33E94 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RFX4Q33E94 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
RFX4Q33E94 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
RFX4Q33E94 AC068446.1-201ENST00000556425 1549 ntBASIC4.69□□□□□ -1.66
RFX4Q33E94 SALL4P2-201ENST00000423288 2910 ntBASIC4.69□□□□□ -1.66
RFX4Q33E94 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
RFX4Q33E94 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RFX4Q33E94 OR56A4-201ENST00000330728 1209 ntBASIC4.69□□□□□ -1.66
RFX4Q33E94 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC4.69□□□□□ -1.66
RFX4Q33E94 RNA5SP234-201ENST00000363916 119 ntBASIC4.69□□□□□ -1.66
RFX4Q33E94 RNA5SP90-201ENST00000364801 99 ntBASIC4.69□□□□□ -1.66
RFX4Q33E94 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.69□□□□□ -1.66
RFX4Q33E94 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RFX4Q33E94 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
RFX4Q33E94 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RFX4Q33E94 RAB5CP1-201ENST00000395972 580 ntBASIC4.69□□□□□ -1.66
RFX4Q33E94 MIR1282-201ENST00000408865 101 ntBASIC4.69□□□□□ -1.66
RFX4Q33E94 PTP4A1P1-201ENST00000420539 515 ntBASIC4.69□□□□□ -1.66
RFX4Q33E94 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC4.69□□□□□ -1.66
RFX4Q33E94 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.69□□□□□ -1.66
RFX4Q33E94 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC4.69□□□□□ -1.66
RFX4Q33E94 OR6C71P-201ENST00000432580 913 ntBASIC4.69□□□□□ -1.66
RFX4Q33E94 NPM1P48-201ENST00000436002 853 ntBASIC4.69□□□□□ -1.66
RFX4Q33E94 RPS29P10-201ENST00000439197 166 ntBASIC4.69□□□□□ -1.66
RFX4Q33E94 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.69□□□□□ -1.66
RFX4Q33E94 ARL4AP3-201ENST00000441452 574 ntBASIC4.69□□□□□ -1.66
RFX4Q33E94 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.69□□□□□ -1.66
RFX4Q33E94 RPL31P15-201ENST00000449770 338 ntBASIC4.69□□□□□ -1.66
RFX4Q33E94 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.69□□□□□ -1.66
RFX4Q33E94 AC022795.1-201ENST00000473808 480 ntBASIC4.69□□□□□ -1.66
RFX4Q33E94 AC020779.1-201ENST00000478757 796 ntBASIC4.69□□□□□ -1.66
RFX4Q33E94 EIF1P7-201ENST00000487533 337 ntBASIC4.69□□□□□ -1.66
RFX4Q33E94 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RFX4Q33E94 HMGB1P19-201ENST00000517578 577 ntBASIC4.69□□□□□ -1.66
RFX4Q33E94 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC4.69□□□□□ -1.66
RFX4Q33E94 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC4.69□□□□□ -1.66
RFX4Q33E94 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.69□□□□□ -1.66
RFX4Q33E94 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC4.69□□□□□ -1.66
RFX4Q33E94 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
RFX4Q33E94 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RFX4Q33E94 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC4.69□□□□□ -1.66
RFX4Q33E94 AC008521.2-201ENST00000591021 259 ntBASIC4.69□□□□□ -1.66
RFX4Q33E94 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC4.69□□□□□ -1.66
RFX4Q33E94 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC4.69□□□□□ -1.66
RFX4Q33E94 WBP1LP8-201ENST00000617401 327 ntBASIC4.69□□□□□ -1.66
RFX4Q33E94 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
RFX4Q33E94 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
RFX4Q33E94 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
RFX4Q33E94 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
RFX4Q33E94 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
RFX4Q33E94 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
RFX4Q33E94 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.69□□□□□ -1.66
RFX4Q33E94 DDX18P5-201ENST00000534547 1306 ntBASIC4.69□□□□□ -1.66
RFX4Q33E94 CR383656.5-201ENST00000547616 1340 ntBASIC4.69□□□□□ -1.66
RFX4Q33E94 AC092747.4-201ENST00000620519 1861 ntBASIC4.69□□□□□ -1.66
RFX4Q33E94 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
RFX4Q33E94 AC092435.4-201ENST00000623012 4159 ntBASIC4.68□□□□□ -1.66
RFX4Q33E94 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RFX4Q33E94 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.68□□□□□ -1.66
RFX4Q33E94 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
RFX4Q33E94 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.68□□□□□ -1.66
RFX4Q33E94 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.68□□□□□ -1.66
RFX4Q33E94 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
RFX4Q33E94 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.68□□□□□ -1.66
RFX4Q33E94 TMSB4XP4-201ENST00000323496 618 ntBASIC4.68□□□□□ -1.66
RFX4Q33E94 RN7SKP113-201ENST00000363891 295 ntBASIC4.68□□□□□ -1.66
RFX4Q33E94 SSX3-202ENST00000376893 800 ntTSL 2 BASIC4.68□□□□□ -1.66
RFX4Q33E94 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms