Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AL035079.1-201ENST00000405210 287 ntBASIC4.54□□□□□ -1.68
H3F3AP84243 U3.32-201ENST00000408116 212 ntBASIC4.54□□□□□ -1.68
H3F3AP84243 Z68694.1-201ENST00000413929 841 ntBASIC4.54□□□□□ -1.68
H3F3AP84243 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.54□□□□□ -1.68
H3F3AP84243 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.54□□□□□ -1.68
H3F3AP84243 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.54□□□□□ -1.68
H3F3AP84243 AL627308.1-201ENST00000435693 821 ntBASIC4.54□□□□□ -1.68
H3F3AP84243 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC4.54□□□□□ -1.68
H3F3AP84243 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.54□□□□□ -1.68
H3F3AP84243 AL354714.3-201ENST00000447284 493 ntBASIC4.54□□□□□ -1.68
H3F3AP84243 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.54□□□□□ -1.68
H3F3AP84243 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
H3F3AP84243 AC021660.1-201ENST00000465006 554 ntBASIC4.54□□□□□ -1.68
H3F3AP84243 RPS18P6-201ENST00000476880 458 ntBASIC4.54□□□□□ -1.68
H3F3AP84243 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.54□□□□□ -1.68
H3F3AP84243 RN7SKP260-201ENST00000516907 149 ntBASIC4.54□□□□□ -1.68
H3F3AP84243 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.54□□□□□ -1.68
H3F3AP84243 AC092490.3-201ENST00000545370 572 ntBASIC4.54□□□□□ -1.68
H3F3AP84243 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.54□□□□□ -1.68
H3F3AP84243 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.54□□□□□ -1.68
H3F3AP84243 AC016769.4-201ENST00000616893 535 ntBASIC4.54□□□□□ -1.68
H3F3AP84243 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.54□□□□□ -1.68
H3F3AP84243 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
H3F3AP84243 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.54□□□□□ -1.68
H3F3AP84243 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC4.54□□□□□ -1.68
H3F3AP84243 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
H3F3AP84243 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
H3F3AP84243 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.54□□□□□ -1.68
H3F3AP84243 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
H3F3AP84243 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
H3F3AP84243 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
H3F3AP84243 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
H3F3AP84243 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
H3F3AP84243 SAMMSON-213ENST00000641336 1521 ntBASIC4.53□□□□□ -1.68
H3F3AP84243 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.53□□□□□ -1.68
H3F3AP84243 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
H3F3AP84243 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
H3F3AP84243 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
H3F3AP84243 ATP5HP3-201ENST00000396994 486 ntBASIC4.53□□□□□ -1.68
H3F3AP84243 RN7SKP16-201ENST00000410180 299 ntBASIC4.53□□□□□ -1.68
H3F3AP84243 RNA5SP296-201ENST00000410523 111 ntBASIC4.53□□□□□ -1.68
H3F3AP84243 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.53□□□□□ -1.68
H3F3AP84243 RPL34P6-201ENST00000432390 345 ntBASIC4.53□□□□□ -1.68
H3F3AP84243 NPM1P33-201ENST00000438918 872 ntBASIC4.53□□□□□ -1.68
H3F3AP84243 RPS29P9-201ENST00000440360 171 ntBASIC4.53□□□□□ -1.68
H3F3AP84243 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.53□□□□□ -1.68
H3F3AP84243 NDUFA5P8-201ENST00000449019 346 ntBASIC4.53□□□□□ -1.68
H3F3AP84243 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC4.53□□□□□ -1.68
H3F3AP84243 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.53□□□□□ -1.68
H3F3AP84243 NPM1P29-201ENST00000483112 803 ntBASIC4.53□□□□□ -1.68
H3F3AP84243 HMGN2P25-201ENST00000486956 268 ntBASIC4.53□□□□□ -1.68
H3F3AP84243 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.53□□□□□ -1.68
H3F3AP84243 AC109462.1-201ENST00000491087 368 ntBASIC4.53□□□□□ -1.68
H3F3AP84243 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.53□□□□□ -1.68
H3F3AP84243 NIFKP7-201ENST00000503365 834 ntBASIC4.53□□□□□ -1.68
H3F3AP84243 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC4.53□□□□□ -1.68
H3F3AP84243 MYL12BP2-201ENST00000503948 512 ntBASIC4.53□□□□□ -1.68
H3F3AP84243 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
H3F3AP84243 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.53□□□□□ -1.68
H3F3AP84243 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.53□□□□□ -1.68
H3F3AP84243 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.53□□□□□ -1.68
H3F3AP84243 AL390334.1-201ENST00000556395 450 ntBASIC4.53□□□□□ -1.68
H3F3AP84243 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.53□□□□□ -1.68
H3F3AP84243 NDUFB4P11-201ENST00000560510 395 ntBASIC4.53□□□□□ -1.68
H3F3AP84243 AC105254.2-201ENST00000603636 436 ntBASIC4.53□□□□□ -1.68
H3F3AP84243 AL122125.1-201ENST00000616999 600 ntBASIC4.53□□□□□ -1.68
H3F3AP84243 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.53□□□□□ -1.68
H3F3AP84243 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC4.53□□□□□ -1.68
H3F3AP84243 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.53□□□□□ -1.68
H3F3AP84243 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
H3F3AP84243 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
H3F3AP84243 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
H3F3AP84243 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
H3F3AP84243 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
H3F3AP84243 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
H3F3AP84243 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
H3F3AP84243 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.53□□□□□ -1.68
H3F3AP84243 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.53□□□□□ -1.68
H3F3AP84243 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.53□□□□□ -1.68
H3F3AP84243 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
H3F3AP84243 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.69
H3F3AP84243 ADAM5-202ENST00000399789 1942 ntBASIC4.52□□□□□ -1.69
H3F3AP84243 HSPA8P18-201ENST00000439846 1928 ntBASIC4.52□□□□□ -1.69
H3F3AP84243 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
H3F3AP84243 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
H3F3AP84243 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
H3F3AP84243 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
H3F3AP84243 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
H3F3AP84243 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
H3F3AP84243 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
H3F3AP84243 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.52□□□□□ -1.69
H3F3AP84243 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
H3F3AP84243 AL138820.1-201ENST00000617901 5305 ntBASIC4.52□□□□□ -1.69
H3F3AP84243 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
H3F3AP84243 AC017079.1-201ENST00000333650 415 ntBASIC4.52□□□□□ -1.69
H3F3AP84243 RNA5SP305-201ENST00000362665 119 ntBASIC4.52□□□□□ -1.69
H3F3AP84243 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
H3F3AP84243 AL078599.1-201ENST00000402075 293 ntBASIC4.52□□□□□ -1.69
H3F3AP84243 SNORA77-201ENST00000408716 125 ntBASIC4.52□□□□□ -1.69
H3F3AP84243 DPPA2P3-201ENST00000411853 655 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms