Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VCPP55072 AP000769.2-201ENST00000602344 396 ntBASIC5.66□□□□□ -1.5
VCPP55072 AC069307.1-201ENST00000602820 447 ntBASIC5.66□□□□□ -1.5
VCPP55072 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.66□□□□□ -1.5
VCPP55072 AC104687.2-201ENST00000604442 342 ntBASIC5.66□□□□□ -1.5
VCPP55072 AL356752.1-201ENST00000615844 593 ntBASIC5.66□□□□□ -1.5
VCPP55072 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VCPP55072 AC087385.3-201ENST00000620477 187 ntBASIC5.66□□□□□ -1.5
VCPP55072 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VCPP55072 AC135068.5-201ENST00000624197 983 ntBASIC5.66□□□□□ -1.5
VCPP55072 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VCPP55072 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.66□□□□□ -1.5
VCPP55072 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VCPP55072 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VCPP55072 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VCPP55072 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC5.66□□□□□ -1.5
VCPP55072 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.66□□□□□ -1.5
VCPP55072 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
VCPP55072 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
VCPP55072 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.65□□□□□ -1.5
VCPP55072 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
VCPP55072 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
VCPP55072 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
VCPP55072 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
VCPP55072 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC5.65□□□□□ -1.5
VCPP55072 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.65□□□□□ -1.5
VCPP55072 RNA5SP87-201ENST00000384155 118 ntBASIC5.65□□□□□ -1.5
VCPP55072 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.65□□□□□ -1.5
VCPP55072 OR4K12P-201ENST00000406538 961 ntBASIC5.65□□□□□ -1.5
VCPP55072 RN7SKP27-201ENST00000410684 333 ntBASIC5.65□□□□□ -1.5
VCPP55072 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
VCPP55072 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.65□□□□□ -1.5
VCPP55072 RPL7AP49-201ENST00000429522 581 ntBASIC5.65□□□□□ -1.5
VCPP55072 AL591438.1-201ENST00000433508 581 ntBASIC5.65□□□□□ -1.5
VCPP55072 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.65□□□□□ -1.5
VCPP55072 AC105399.1-202ENST00000447303 205 ntBASIC5.65□□□□□ -1.5
VCPP55072 AC090804.1-201ENST00000448870 490 ntBASIC5.65□□□□□ -1.5
VCPP55072 GAPDHP14-201ENST00000450472 937 ntBASIC5.65□□□□□ -1.5
VCPP55072 AC103987.1-201ENST00000473394 348 ntBASIC5.65□□□□□ -1.5
VCPP55072 AL161747.1-201ENST00000480068 358 ntBASIC5.65□□□□□ -1.5
VCPP55072 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.65□□□□□ -1.5
VCPP55072 AC015864.1-201ENST00000496512 544 ntBASIC5.65□□□□□ -1.5
VCPP55072 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.65□□□□□ -1.5
VCPP55072 AC004980.4-201ENST00000513375 203 ntBASIC5.65□□□□□ -1.5
VCPP55072 HMGN1P9-201ENST00000515212 298 ntBASIC5.65□□□□□ -1.5
VCPP55072 OR5AN2P-201ENST00000534535 896 ntBASIC5.65□□□□□ -1.5
VCPP55072 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.65□□□□□ -1.5
VCPP55072 AL110118.1-201ENST00000553543 400 ntBASIC5.65□□□□□ -1.5
VCPP55072 AL359219.2-201ENST00000555184 348 ntBASIC5.65□□□□□ -1.5
VCPP55072 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.65□□□□□ -1.5
VCPP55072 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.65□□□□□ -1.5
VCPP55072 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.65□□□□□ -1.5
VCPP55072 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.65□□□□□ -1.5
VCPP55072 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.65□□□□□ -1.5
VCPP55072 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.65□□□□□ -1.5
VCPP55072 MIR7703-201ENST00000620784 77 ntBASIC5.65□□□□□ -1.5
VCPP55072 AC138965.3-201ENST00000623875 498 ntBASIC5.65□□□□□ -1.5
VCPP55072 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.65□□□□□ -1.5
VCPP55072 CYP4F35P-202ENST00000636121 390 ntBASIC5.65□□□□□ -1.5
VCPP55072 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.65□□□□□ -1.51
VCPP55072 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
VCPP55072 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
VCPP55072 INTS6P1-201ENST00000504674 2530 ntBASIC5.65□□□□□ -1.51
VCPP55072 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VCPP55072 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VCPP55072 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.64□□□□□ -1.51
VCPP55072 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.64□□□□□ -1.51
VCPP55072 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
VCPP55072 AC019072.1-201ENST00000604535 1551 ntBASIC5.64□□□□□ -1.51
VCPP55072 AL078621.3-201ENST00000623707 2042 ntBASIC5.64□□□□□ -1.51
VCPP55072 AL138820.1-201ENST00000617901 5305 ntBASIC5.64□□□□□ -1.51
VCPP55072 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VCPP55072 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VCPP55072 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VCPP55072 RNU1-149P-201ENST00000390870 161 ntBASIC5.64□□□□□ -1.51
VCPP55072 EI24P3-201ENST00000399046 1062 ntBASIC5.64□□□□□ -1.51
VCPP55072 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.64□□□□□ -1.51
VCPP55072 GSTM5P1-201ENST00000434751 660 ntBASIC5.64□□□□□ -1.51
VCPP55072 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.64□□□□□ -1.51
VCPP55072 AC016772.1-201ENST00000444170 1261 ntBASIC5.64□□□□□ -1.51
VCPP55072 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.64□□□□□ -1.51
VCPP55072 RN7SL354P-201ENST00000469282 294 ntBASIC5.64□□□□□ -1.51
VCPP55072 AP000797.2-201ENST00000475768 606 ntBASIC5.64□□□□□ -1.51
VCPP55072 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC5.64□□□□□ -1.51
VCPP55072 MTND6P2-201ENST00000512226 524 ntBASIC5.64□□□□□ -1.51
VCPP55072 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.64□□□□□ -1.51
VCPP55072 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.64□□□□□ -1.51
VCPP55072 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.64□□□□□ -1.51
VCPP55072 TOMM20P2-201ENST00000540082 421 ntBASIC5.64□□□□□ -1.51
VCPP55072 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
VCPP55072 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.64□□□□□ -1.51
VCPP55072 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.64□□□□□ -1.51
VCPP55072 AC026367.3-201ENST00000619032 590 ntBASIC5.64□□□□□ -1.51
VCPP55072 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.64□□□□□ -1.51
VCPP55072 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VCPP55072 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
VCPP55072 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VCPP55072 AC083843.2-201ENST00000568248 6253 ntBASIC5.64□□□□□ -1.51
VCPP55072 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.64□□□□□ -1.51
VCPP55072 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms