Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC8.62□□□□□ -1.03
SMARCA4P51532 OR14L1P-202ENST00000641545 3009 ntBASIC8.61□□□□□ -1.03
SMARCA4P51532 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
SMARCA4P51532 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
SMARCA4P51532 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
SMARCA4P51532 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
SMARCA4P51532 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
SMARCA4P51532 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC8.61□□□□□ -1.03
SMARCA4P51532 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC8.61□□□□□ -1.03
SMARCA4P51532 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
SMARCA4P51532 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
SMARCA4P51532 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
SMARCA4P51532 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC8.61□□□□□ -1.03
SMARCA4P51532 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
SMARCA4P51532 AL158073.1-201ENST00000426848 1104 ntBASIC8.61□□□□□ -1.03
SMARCA4P51532 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
SMARCA4P51532 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC8.61□□□□□ -1.03
SMARCA4P51532 MTCO1P35-201ENST00000515270 228 ntBASIC8.61□□□□□ -1.03
SMARCA4P51532 HMGB1P23-201ENST00000518743 568 ntBASIC8.61□□□□□ -1.03
SMARCA4P51532 AC092709.1-201ENST00000521355 1045 ntBASIC8.61□□□□□ -1.03
SMARCA4P51532 GLRXP2-201ENST00000555594 321 ntBASIC8.61□□□□□ -1.03
SMARCA4P51532 AC069061.3-201ENST00000582254 823 ntBASIC8.61□□□□□ -1.03
SMARCA4P51532 BNIP3P33-201ENST00000598912 569 ntBASIC8.61□□□□□ -1.03
SMARCA4P51532 AC025857.2-201ENST00000602711 238 ntBASIC8.61□□□□□ -1.03
SMARCA4P51532 AC090948.1-201ENST00000607464 549 ntBASIC8.61□□□□□ -1.03
SMARCA4P51532 AC000095.2-202ENST00000637415 154 ntBASIC8.61□□□□□ -1.03
SMARCA4P51532 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC8.61□□□□□ -1.03
SMARCA4P51532 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC8.61□□□□□ -1.03
SMARCA4P51532 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
SMARCA4P51532 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC8.6□□□□□ -1.03
SMARCA4P51532 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC8.6□□□□□ -1.03
SMARCA4P51532 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
SMARCA4P51532 PTER-201ENST00000298942 3448 ntTSL 5 BASIC8.6□□□□□ -1.03
SMARCA4P51532 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC8.6□□□□□ -1.03
SMARCA4P51532 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC8.6□□□□□ -1.03
SMARCA4P51532 AC091167.1-201ENST00000492017 396 ntBASIC8.6□□□□□ -1.03
SMARCA4P51532 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC8.6□□□□□ -1.03
SMARCA4P51532 AC084783.1-201ENST00000565846 910 ntBASIC8.6□□□□□ -1.03
SMARCA4P51532 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC8.6□□□□□ -1.03
SMARCA4P51532 AC093227.2-201ENST00000589357 285 ntBASIC8.6□□□□□ -1.03
SMARCA4P51532 AL049536.1-201ENST00000625043 744 ntBASIC8.6□□□□□ -1.03
SMARCA4P51532 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
SMARCA4P51532 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC8.6□□□□□ -1.03
SMARCA4P51532 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
SMARCA4P51532 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
SMARCA4P51532 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC8.6□□□□□ -1.03
SMARCA4P51532 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
SMARCA4P51532 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC8.6□□□□□ -1.03
SMARCA4P51532 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC8.6□□□□□ -1.03
SMARCA4P51532 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC8.59□□□□□ -1.03
SMARCA4P51532 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC8.59□□□□□ -1.03
SMARCA4P51532 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
SMARCA4P51532 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC8.59□□□□□ -1.03
SMARCA4P51532 AURKA-208ENST00000395915 2114 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
SMARCA4P51532 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
SMARCA4P51532 OR4C10P-201ENST00000434991 931 ntBASIC8.59□□□□□ -1.03
SMARCA4P51532 RPS3AP54-201ENST00000435535 734 ntBASIC8.59□□□□□ -1.03
SMARCA4P51532 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC8.59□□□□□ -1.03
SMARCA4P51532 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC8.59□□□□□ -1.03
SMARCA4P51532 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC8.59□□□□□ -1.03
SMARCA4P51532 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC8.59□□□□□ -1.03
SMARCA4P51532 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
SMARCA4P51532 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC8.59□□□□□ -1.03
SMARCA4P51532 AL591034.3-201ENST00000605511 685 ntBASIC8.59□□□□□ -1.03
SMARCA4P51532 AC018695.5-201ENST00000605872 315 ntBASIC8.59□□□□□ -1.03
SMARCA4P51532 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
SMARCA4P51532 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC8.59□□□□□ -1.04
SMARCA4P51532 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
SMARCA4P51532 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
SMARCA4P51532 MIR23B-201ENST00000384832 97 ntBASIC8.58□□□□□ -1.04
SMARCA4P51532 RNA5SP241-201ENST00000391326 114 ntBASIC8.58□□□□□ -1.04
SMARCA4P51532 RPL32P23-201ENST00000397237 405 ntBASIC8.58□□□□□ -1.04
SMARCA4P51532 RPL23AP59-201ENST00000399415 461 ntBASIC8.58□□□□□ -1.04
SMARCA4P51532 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC8.58□□□□□ -1.04
SMARCA4P51532 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC8.58□□□□□ -1.04
SMARCA4P51532 IGKV3OR22-2-201ENST00000517943 313 ntBASIC8.58□□□□□ -1.04
SMARCA4P51532 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
SMARCA4P51532 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC8.58□□□□□ -1.04
SMARCA4P51532 U3.53-201ENST00000628922 216 ntBASIC8.58□□□□□ -1.04
SMARCA4P51532 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
SMARCA4P51532 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
SMARCA4P51532 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC8.58□□□□□ -1.04
SMARCA4P51532 AL731566.1-201ENST00000620490 1937 ntBASIC8.58□□□□□ -1.04
SMARCA4P51532 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
SMARCA4P51532 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC8.58□□□□□ -1.04
SMARCA4P51532 SNORA48.7-201ENST00000391302 135 ntBASIC8.58□□□□□ -1.04
SMARCA4P51532 AL050305.1-201ENST00000399993 1230 ntBASIC8.58□□□□□ -1.04
SMARCA4P51532 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC8.58□□□□□ -1.04
SMARCA4P51532 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC8.58□□□□□ -1.04
SMARCA4P51532 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC8.58□□□□□ -1.04
SMARCA4P51532 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC8.58□□□□□ -1.04
SMARCA4P51532 AC025164.1-201ENST00000496249 478 ntBASIC8.58□□□□□ -1.04
SMARCA4P51532 PPM1AP1-201ENST00000502740 1135 ntBASIC8.58□□□□□ -1.04
SMARCA4P51532 ENPP7P11-201ENST00000505915 627 ntBASIC8.58□□□□□ -1.04
SMARCA4P51532 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC8.58□□□□□ -1.04
SMARCA4P51532 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC8.58□□□□□ -1.04
SMARCA4P51532 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
SMARCA4P51532 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
SMARCA4P51532 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
SMARCA4P51532 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 184.1 ms