Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AC104843.2-201ENST00000427666 297 ntBASIC4.52□□□□□ -1.69
CX3CR1P49238 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.52□□□□□ -1.69
CX3CR1P49238 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC4.52□□□□□ -1.69
CX3CR1P49238 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.52□□□□□ -1.69
CX3CR1P49238 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC4.52□□□□□ -1.69
CX3CR1P49238 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.52□□□□□ -1.69
CX3CR1P49238 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.52□□□□□ -1.69
CX3CR1P49238 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.52□□□□□ -1.69
CX3CR1P49238 AC020779.1-201ENST00000478757 796 ntBASIC4.52□□□□□ -1.69
CX3CR1P49238 RN7SL184P-201ENST00000488308 297 ntBASIC4.52□□□□□ -1.69
CX3CR1P49238 AC097173.1-201ENST00000505862 819 ntBASIC4.52□□□□□ -1.69
CX3CR1P49238 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.52□□□□□ -1.69
CX3CR1P49238 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC4.52□□□□□ -1.69
CX3CR1P49238 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC4.52□□□□□ -1.69
CX3CR1P49238 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC4.52□□□□□ -1.69
CX3CR1P49238 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
CX3CR1P49238 AC126177.5-201ENST00000549599 178 ntBASIC4.52□□□□□ -1.69
CX3CR1P49238 AL390726.5-202ENST00000564800 256 ntBASIC4.52□□□□□ -1.69
CX3CR1P49238 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CX3CR1P49238 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CX3CR1P49238 AC020978.7-201ENST00000575953 1187 ntBASIC4.52□□□□□ -1.69
CX3CR1P49238 SNORD95-201ENST00000579879 68 ntBASIC4.52□□□□□ -1.69
CX3CR1P49238 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.52□□□□□ -1.69
CX3CR1P49238 AC124856.1-201ENST00000600819 896 ntBASIC4.52□□□□□ -1.69
CX3CR1P49238 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.52□□□□□ -1.69
CX3CR1P49238 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.52□□□□□ -1.69
CX3CR1P49238 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CX3CR1P49238 AL121890.2-201ENST00000617644 465 ntBASIC4.52□□□□□ -1.69
CX3CR1P49238 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.52□□□□□ -1.69
CX3CR1P49238 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.52□□□□□ -1.69
CX3CR1P49238 AC135068.12-201ENST00000637370 931 ntBASIC4.52□□□□□ -1.69
CX3CR1P49238 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
CX3CR1P49238 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CX3CR1P49238 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CX3CR1P49238 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.52□□□□□ -1.69
CX3CR1P49238 AL672167.1-204ENST00000641875 3017 ntBASIC4.52□□□□□ -1.69
CX3CR1P49238 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CX3CR1P49238 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.52□□□□□ -1.69
CX3CR1P49238 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CX3CR1P49238 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.52□□□□□ -1.69
CX3CR1P49238 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CX3CR1P49238 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.52□□□□□ -1.69
CX3CR1P49238 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
CX3CR1P49238 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.52□□□□□ -1.69
CX3CR1P49238 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.51□□□□□ -1.69
CX3CR1P49238 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CX3CR1P49238 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CX3CR1P49238 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CX3CR1P49238 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
CX3CR1P49238 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CX3CR1P49238 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
CX3CR1P49238 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.51□□□□□ -1.69
CX3CR1P49238 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CX3CR1P49238 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.51□□□□□ -1.69
CX3CR1P49238 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CX3CR1P49238 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.51□□□□□ -1.69
CX3CR1P49238 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
CX3CR1P49238 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.51□□□□□ -1.69
CX3CR1P49238 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CX3CR1P49238 U3.3-201ENST00000362986 216 ntBASIC4.51□□□□□ -1.69
CX3CR1P49238 MT-RNR1-201ENST00000389680 954 ntBASIC4.51□□□□□ -1.69
CX3CR1P49238 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CX3CR1P49238 RNA5SP105-201ENST00000391123 113 ntBASIC4.51□□□□□ -1.69
CX3CR1P49238 AC233289.1-201ENST00000403700 508 ntBASIC4.51□□□□□ -1.69
CX3CR1P49238 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC4.51□□□□□ -1.69
CX3CR1P49238 AL121578.1-201ENST00000428051 892 ntBASIC4.51□□□□□ -1.69
CX3CR1P49238 AC009238.2-201ENST00000431026 355 ntBASIC4.51□□□□□ -1.69
CX3CR1P49238 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC4.51□□□□□ -1.69
CX3CR1P49238 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.51□□□□□ -1.69
CX3CR1P49238 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.51□□□□□ -1.69
CX3CR1P49238 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC4.51□□□□□ -1.69
CX3CR1P49238 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC4.51□□□□□ -1.69
CX3CR1P49238 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.51□□□□□ -1.69
CX3CR1P49238 NPM1P39-201ENST00000449818 867 ntBASIC4.51□□□□□ -1.69
CX3CR1P49238 RPS26P41-201ENST00000450370 284 ntBASIC4.51□□□□□ -1.69
CX3CR1P49238 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.51□□□□□ -1.69
CX3CR1P49238 AC023141.9-201ENST00000458734 412 ntBASIC4.51□□□□□ -1.69
CX3CR1P49238 AL591473.1-201ENST00000464297 313 ntBASIC4.51□□□□□ -1.69
CX3CR1P49238 AC105918.1-201ENST00000474399 838 ntBASIC4.51□□□□□ -1.69
CX3CR1P49238 RPL7P6-201ENST00000480903 738 ntBASIC4.51□□□□□ -1.69
CX3CR1P49238 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.51□□□□□ -1.69
CX3CR1P49238 GTF2F2P1-201ENST00000511083 675 ntBASIC4.51□□□□□ -1.69
CX3CR1P49238 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
CX3CR1P49238 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.51□□□□□ -1.69
CX3CR1P49238 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.51□□□□□ -1.69
CX3CR1P49238 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CX3CR1P49238 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.51□□□□□ -1.69
CX3CR1P49238 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC4.51□□□□□ -1.69
CX3CR1P49238 AC090888.3-201ENST00000558917 509 ntBASIC4.51□□□□□ -1.69
CX3CR1P49238 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CX3CR1P49238 CD24P2-201ENST00000565486 219 ntBASIC4.51□□□□□ -1.69
CX3CR1P49238 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC4.51□□□□□ -1.69
CX3CR1P49238 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.51□□□□□ -1.69
CX3CR1P49238 AC109309.2-201ENST00000612597 332 ntBASIC4.51□□□□□ -1.69
CX3CR1P49238 AC007204.2-201ENST00000615022 616 ntBASIC4.51□□□□□ -1.69
CX3CR1P49238 BX005214.3-202ENST00000619809 325 ntBASIC4.51□□□□□ -1.69
CX3CR1P49238 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC4.51□□□□□ -1.69
CX3CR1P49238 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
CX3CR1P49238 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CX3CR1P49238 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms