Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC9.67□□□□□ -0.86
HOXD11P31277 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
HOXD11P31277 LINC02067-201ENST00000473595 2845 ntTSL 2 BASIC9.67□□□□□ -0.86
HOXD11P31277 AL929601.3-201ENST00000613990 2086 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
HOXD11P31277 TMPRSS11B-201ENST00000332644 2671 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
HOXD11P31277 AC097468.1-201ENST00000441450 1992 ntTSL 2 BASIC9.67□□□□□ -0.86
HOXD11P31277 PTK2B-210ENST00000517339 3914 ntTSL 2 BASIC9.67□□□□□ -0.86
HOXD11P31277 OR3A3-201ENST00000291231 966 ntBASIC9.67□□□□□ -0.86
HOXD11P31277 PRR32-201ENST00000371125 1228 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
HOXD11P31277 PDZD11-202ENST00000374454 784 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
HOXD11P31277 Y_RNA.558-201ENST00000384685 113 ntBASIC9.67□□□□□ -0.86
HOXD11P31277 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC9.67□□□□□ -0.86
HOXD11P31277 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC9.67□□□□□ -0.86
HOXD11P31277 AC068533.4-201ENST00000450043 922 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
HOXD11P31277 AL031737.1-201ENST00000450125 223 ntBASIC9.67□□□□□ -0.86
HOXD11P31277 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC9.67□□□□□ -0.86
HOXD11P31277 RPL23AP64-201ENST00000469465 435 ntBASIC9.67□□□□□ -0.86
HOXD11P31277 LINC01341-204ENST00000505748 595 ntTSL 4 BASIC9.67□□□□□ -0.86
HOXD11P31277 AC006499.6-201ENST00000511169 607 ntBASIC9.67□□□□□ -0.86
HOXD11P31277 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC9.67□□□□□ -0.86
HOXD11P31277 AP002469.1-201ENST00000526011 1043 ntBASIC9.67□□□□□ -0.86
HOXD11P31277 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC9.67□□□□□ -0.86
HOXD11P31277 NACAP3-201ENST00000552100 481 ntBASIC9.67□□□□□ -0.86
HOXD11P31277 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC9.67□□□□□ -0.86
HOXD11P31277 AC012414.3-201ENST00000559621 748 ntTSL 5 BASIC9.67□□□□□ -0.86
HOXD11P31277 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC9.67□□□□□ -0.86
HOXD11P31277 OR3A3-202ENST00000574571 966 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
HOXD11P31277 MCRIP2P2-201ENST00000605276 209 ntBASIC9.67□□□□□ -0.86
HOXD11P31277 AL596092.1-201ENST00000605701 304 ntBASIC9.67□□□□□ -0.86
HOXD11P31277 U7.2-201ENST00000607576 63 ntBASIC9.67□□□□□ -0.86
HOXD11P31277 RN7SL462P-201ENST00000610302 261 ntBASIC9.67□□□□□ -0.86
HOXD11P31277 RN7SL422P-201ENST00000612850 261 ntBASIC9.67□□□□□ -0.86
HOXD11P31277 MIR6872-201ENST00000612981 62 ntBASIC9.67□□□□□ -0.86
HOXD11P31277 AL352984.2-202ENST00000613699 155 ntBASIC9.67□□□□□ -0.86
HOXD11P31277 RN7SL343P-201ENST00000620904 261 ntBASIC9.67□□□□□ -0.86
HOXD11P31277 RN7SL640P-201ENST00000622591 261 ntBASIC9.67□□□□□ -0.86
HOXD11P31277 SMG7-216ENST00000638826 219 ntTSL 2 BASIC9.67□□□□□ -0.86
HOXD11P31277 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC9.67□□□□□ -0.86
HOXD11P31277 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
HOXD11P31277 PPHLN1-224ENST00000613154 1863 ntAPPRIS ALT1 TSL 5 BASIC9.67□□□□□ -0.86
HOXD11P31277 MTR-205ENST00000535889 10405 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
HOXD11P31277 AC068512.1-201ENST00000584542 1811 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
HOXD11P31277 BEND3-202ENST00000429433 6654 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
HOXD11P31277 STAG3-219ENST00000620100 4203 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
HOXD11P31277 ZDHHC15-203ENST00000541184 6012 ntAPPRIS ALT2 TSL 2 BASIC9.67□□□□□ -0.86
HOXD11P31277 PKD1-201ENST00000262304 14138 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
HOXD11P31277 GOLGA6L5P-201ENST00000414190 2337 ntTSL 2 BASIC9.67□□□□□ -0.86
HOXD11P31277 SLC7A3-201ENST00000298085 2235 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
HOXD11P31277 IL18R1-203ENST00000409599 3854 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
HOXD11P31277 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC9.67□□□□□ -0.86
HOXD11P31277 BOC-202ENST00000355385 4278 ntAPPRIS P3 TSL 5 BASIC9.67□□□□□ -0.86
HOXD11P31277 RAD21-201ENST00000297338 3749 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
HOXD11P31277 RARS-201ENST00000231572 2146 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
HOXD11P31277 AC098864.1-202ENST00000507869 2129 ntTSL 2 BASIC9.67□□□□□ -0.86
HOXD11P31277 FPR3-201ENST00000339223 2620 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
HOXD11P31277 TRIM6-203ENST00000380107 2590 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
HOXD11P31277 CABLES1-202ENST00000400473 1544 ntAPPRIS ALT2 TSL 2 BASIC9.66□□□□□ -0.86
HOXD11P31277 ATP8B5P-201ENST00000329395 2869 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
HOXD11P31277 POLDIP3-203ENST00000348657 3323 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
HOXD11P31277 AC007608.3-201ENST00000570167 5214 ntTSL 2 BASIC9.66□□□□□ -0.86
HOXD11P31277 CALN1-202ENST00000395275 9459 ntAPPRIS ALT1 TSL 5 BASIC9.66□□□□□ -0.86
HOXD11P31277 MAT2A-201ENST00000306434 2819 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
HOXD11P31277 PCDH15-223ENST00000495484 1896 ntTSL 5 BASIC9.66□□□□□ -0.86
HOXD11P31277 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC9.66□□□□□ -0.86
HOXD11P31277 CEPT1-210ENST00000545121 2251 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
HOXD11P31277 WISP3-204ENST00000368666 2700 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
HOXD11P31277 NFE2L2-211ENST00000464747 2749 ntTSL 2 BASIC9.66□□□□□ -0.86
HOXD11P31277 TRIM39-203ENST00000396547 3187 ntAPPRIS P4 TSL 1 (best) BASIC9.66□□□□□ -0.86
HOXD11P31277 AC100778.3-201ENST00000580060 1750 ntBASIC9.66□□□□□ -0.86
HOXD11P31277 AL137058.3-201ENST00000624531 3099 ntBASIC9.66□□□□□ -0.86
HOXD11P31277 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC9.66□□□□□ -0.86
HOXD11P31277 CNBD2-205ENST00000538900 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
HOXD11P31277 MAP1LC3C-201ENST00000357246 1182 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
HOXD11P31277 MIR450A1-201ENST00000362262 91 ntBASIC9.66□□□□□ -0.86
HOXD11P31277 RN7SKP63-201ENST00000363187 301 ntBASIC9.66□□□□□ -0.86
HOXD11P31277 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
HOXD11P31277 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
HOXD11P31277 CCR3-203ENST00000395942 1201 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
HOXD11P31277 RN7SKP221-201ENST00000410420 301 ntBASIC9.66□□□□□ -0.86
HOXD11P31277 RN7SKP131-201ENST00000410698 301 ntBASIC9.66□□□□□ -0.86
HOXD11P31277 AC092373.1-201ENST00000414951 490 ntBASIC9.66□□□□□ -0.86
HOXD11P31277 AC084809.2-201ENST00000444464 512 ntTSL 2 BASIC9.66□□□□□ -0.86
HOXD11P31277 Y_RNA.651-201ENST00000459380 103 ntBASIC9.66□□□□□ -0.86
HOXD11P31277 RN7SL213P-201ENST00000463482 317 ntBASIC9.66□□□□□ -0.86
HOXD11P31277 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
HOXD11P31277 RPPH1-3P-201ENST00000516541 322 ntBASIC9.66□□□□□ -0.86
HOXD11P31277 SAA1-203ENST00000532858 583 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
HOXD11P31277 AC011611.6-201ENST00000547483 255 ntBASIC9.66□□□□□ -0.86
HOXD11P31277 AC011767.1-203ENST00000559762 529 ntTSL 5 BASIC9.66□□□□□ -0.86
HOXD11P31277 AC022968.1-201ENST00000567372 442 ntBASIC9.66□□□□□ -0.86
HOXD11P31277 FRG2KP-202ENST00000568403 827 ntBASIC9.66□□□□□ -0.86
HOXD11P31277 CASC22-201ENST00000569713 386 ntTSL 5 BASIC9.66□□□□□ -0.86
HOXD11P31277 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
HOXD11P31277 DYNLL1P3-201ENST00000596113 266 ntBASIC9.66□□□□□ -0.86
HOXD11P31277 AC068831.7-201ENST00000616954 363 ntBASIC9.66□□□□□ -0.86
HOXD11P31277 MIR1245B-201ENST00000636115 69 ntBASIC9.66□□□□□ -0.86
HOXD11P31277 U6.95-201ENST00000636931 70 ntBASIC9.66□□□□□ -0.86
HOXD11P31277 LINC00284-202ENST00000439707 2521 ntTSL 5 BASIC9.66□□□□□ -0.86
HOXD11P31277 EMC1-207ENST00000477853 6664 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
HOXD11P31277 LMO7-218ENST00000526202 4121 ntTSL 2 BASIC9.66□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms